| Gene: Ccdc191 (coiled-coil domain containing 191) Ictidomys tridecemlineatus |
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Analyze |
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| Symbol: |
Ccdc191 |
| Name: |
coiled-coil domain containing 191 |
| RGD ID: |
12468876 |
| Description: |
ASSOCIATED WITH genetic disease (ortholog) |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| Previously known as: |
coiled-coil domain-containing protein 191; coiled-coil domain-containing protein KIAA1407 homolog |
| RGD Orthologs |
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| Alliance Genes |
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| More Info |
more info ...
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| More Info |
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| Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,607 - 136,069,220 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936536 | 1,451,845 - 1,526,411 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936536 | 1,451,845 - 1,526,329 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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Imported Disease Annotations - ClinVar
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References
Additional References at PubMed
Genomics
Comparative Map Data
Ccdc191
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
| Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
|---|
| JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405602 | 135,995,607 - 136,069,220 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936536 | 1,451,845 - 1,526,411 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936536 | 1,451,845 - 1,526,329 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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CCDC191
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 113,964,137 - 114,056,613 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 113,964,137 - 114,056,594 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 113,682,984 - 113,775,460 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 115,165,674 - 115,258,150 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 115,165,675 - 115,258,150 | NCBI | | | | | Celera | 3 | 112,091,432 - 112,183,887 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q13.31 | NCBI | | | | | HuRef | 3 | 111,057,030 - 111,149,480 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 113,646,347 - 113,738,820 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 116,685,401 - 116,777,888 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ccdc191
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 16 | 43,710,172 - 43,784,677 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 16 | 43,710,163 - 43,784,677 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 16 | 43,889,809 - 43,964,314 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 16 | 43,889,800 - 43,964,314 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 16 | 43,890,015 - 43,964,427 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 16 | 43,813,410 - 43,883,027 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 16 | 44,245,653 - 44,319,476 (+) | NCBI | | Celera | | | Cytogenetic Map | 16 | B4 | NCBI | | | | | cM Map | 16 | 28.44 | NCBI | | | | |
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Ccdc191
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 11 | 70,241,562 - 70,312,288 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 11 | 56,735,655 - 56,806,372 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 11 | 56,735,652 - 56,806,375 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 11 | 61,678,138 - 61,748,773 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 11 | 61,678,045 - 61,748,768 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 11 | 60,808,540 - 60,882,521 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 11 | 58,302,057 - 58,373,397 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | Celera | 11 | 56,288,727 - 56,359,335 (-) | NCBI | | Celera | | | Cytogenetic Map | 11 | q21 | NCBI | | | | |
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Ccdc191
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955427 | 14,061,203 - 14,138,751 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955427 | 14,060,863 - 14,138,850 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CCDC191
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 111,956,314 - 112,048,092 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 111,961,092 - 112,052,870 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 111,102,384 - 111,194,111 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 118,023,344 - 118,114,618 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 118,023,344 - 118,114,618 (-) | Ensembl | panpan1.1 | | panPan2 | |
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CCDC191
(Canis lupus familiaris - dog) |
| Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 33 | 18,228,450 - 18,317,220 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 33 | 18,229,388 - 18,317,106 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 33 | 18,336,728 - 18,425,198 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 33 | 18,474,275 - 18,562,854 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 33 | 18,474,282 - 18,563,530 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 33 | 18,277,639 - 18,365,856 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 33 | 18,329,442 - 18,417,893 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 33 | 18,874,331 - 18,962,817 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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CCDC191
(Sus scrofa - pig) |
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CCDC191
(Chlorocebus sabaeus - green monkey) |
| Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 66,809,588 - 66,900,514 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 66,809,743 - 66,900,024 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 99,568,275 - 99,656,871 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ccdc191
(Heterocephalus glaber - naked mole-rat) |
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Expression
Sequence
| RefSeq Acc Id: |
ENSSTOT00000000300 ⟹ ENSSTOP00000000268 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
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SpeTri2.0 Ensembl | NW_004936536 | 1,451,845 - 1,526,411 (-) | Ensembl |
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| RefSeq Acc Id: |
XM_005327679 ⟹ XP_005327736 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,610 - 136,069,220 (+) | NCBI | SpeTri2.0 | NW_004936536 | 1,451,845 - 1,526,328 (-) | NCBI |
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| Sequence: |
TGCTGTCTTTGAAAGCGGAAGGAACTACAACTCCCAGTGCGACCCGGAAGCTGCTTGGACTGAG
GAGTGGTTGTTGGAGCTTTGGCCGAGGTCCGGGACCGAACCTGGAAAATGCTGCTGGCGACCCA
GGAAAAGTCCACCTCAAAGAAGAGGATGGGGGTGAATCGCTGGAAACAGTTCACAAGGAAGCCG
AATCCCAAGCCTGTTTTTGACCCTGACAATGTGGAGCACTGGATTAAGAGAGTGGAGAAAGCCT
CAGAATTTGCAGTTTTGAATGCATTTTCAGCCAGAAATTTGCACTTACCTGGAAGGATTCAGGA
CCAAATGATAGATTTGGAAACATCTGAGCAAACAGTGGATCATGATGAAGTCTACACAGAAGCT
CAGGAGCTGGTCAATGACTGGTTAGACACCAAACTTAAGCAAGAATTAGCAAGTGATGGAGAAG
GTGATTCTGAAAACACTGTCACAAGTAGCACTGCTATGCCAGAAGCCAGTGGCCATTTGAAATA
TGACAAGTTTGATGATTTATATGGTTATTTGGAGGAAGAGGAGGAAAGTACCACTGTTCAAAAA
TTTATAGACCATCTGCTCCATAGAGAAGTGGTGGATTCTGGGATGCTGGAAGATCTTGGAATGA
AGGAAAACCAAGACAAGAAGCAGCAGAAGGATCCTCGTCTTACCATGGAGATGAGACATAAGCA
GGTAAAAGAAAATCGTTTAAGACGTGAGAAAGAACTAGAATACCAGAAAATTGAAAAGGCCCTG
AAAAAATCAGCCTTCCTGGAGGCTCAGTATCTGGTGCAAGAAGAGAAGAGAAGGAAGGCTCTGG
AGGCCAAGAAAGAAAAGGAGGACATCCAAAGGGAGATGGTGAAGCTCCGGAGGGAGATACTTGA
GAGGAGACGCACCGTGGAGGAAGCATGGAAAATAGAGAAGAAAAGACAAGAAGAAAATTTTCAA
AAGAATCCAGAGAAAGACATGTTTCCAAGTGCTCACGTTCTTTTGAATGAAGAAAAAGTGGCAA
AAGAAAGGAAAAGGAAACTCAAAGAGTTATTAATCCAAACTTTCAAGGAAAATCACCAGTGTCA
AAAACGGTATTTCTCTGCCTGGCACAAGCTGATTCTTGATCATAGGATTAAGCTGGGGAAAGCT
GGGACCTTATCTGACTGGAAACTCCAACTGAAGGTCCTAAGAGCCTGGAGAGACTACACAAGAT
CCCAGAAGTTGGAGAGGGAGACTCAAGCCTTGGAAAATGATCTTCGGGAAGAAAACAGAAAACA
ACAACTGGCCACTGAGTATAACCGGAAACAAGTTCTTCAACACTGCTTTGCAGAATGGCATCAT
TGGTGTAATGCAGAGGTCCTAAAGAGAGAGCTGGCTCGAGCAAAGGAGGAAACTAGGAAGAAAA
TGGATGAGCTGCTGAAGGCAGCATCTCTAGGGAAACTCAGTACAAGTGGGTGGTCATCAGGCAT
CAGTGTACCTGAGGAGGCAACAGCCACAGTGGACTCACTAGTAAGAAACATGGAGGTGACTGCT
GTTCCCTCTTTATCAGAAAACTCATCCTTAGAGAGCAATGGCTGTATGCTCATTCCTCCCCCAG
GAAAGACAACAATGAGTAACTTGCAGTGTCCCCTTCAGAATGTCTCTCAGAACATACCTGACAG
TAAGCCCAAGTCCTTGGATGCTGAGCTCTCTGAACAGCCAAGCAGTGAGGACAAGCTCAGAACC
ACCAGCCACAAAGCAGAACCAGCTTGTGTGAAGCATTTCTGCAACCGCCATGTCTTCCAGCAAC
AGCTGATTGAGAAGCAAAAGAAGAAACTTCAGGAACAGCAGAAAACCATTCTCGATTTGAAGGA
AAAACAGCGGCTGGCAGAGGCTCAGTGGGCAGCTAAGCATGCTGCTGTAGTCACAGATGCACAC
AATCACCTCCTGTTAAAATCCCTAGGGGCAGAGGAACCAAAAGGAACCTGCCAGATGCTTCTGA
ATTCATCTGTTATTTCCCGTAGGACTGAAGGCAGAAGTGACTCCCAAAATTCTCTTTCTGGACC
CAAAAGGAATCCAAAGCAGCTGAAGGCACCCCATCCCATACTGAAAGCCATGGAAGAAAGAGCA
ATTCAACGAGCTGAACGTAGGCAGATCTTGGCAGAGAGGAAGAAAAAACTAGAAGAAGAGAAAT
TGGCCCAGTTAAAGGCCCAAGAGGAAGAACGTCAGAAGAGGGAGGCAGAAGAAAAGGAGGCTCA
GCTTGAGAGAAAACGAGAAGAGAAAAGACTGAAGAAAATGAAAGAACTAGAGAAACAGAAGAGA
ATTAAAAGGAACCAAGAGTTGGAAGCAGTAGCCACAGAACATTATAAAAAGCTCTTGCTAAGAA
AAAAAGGTCTAGAACCTTGGAAGAGATTGAGAATGCAAAGCAAACAAAACACCCAGGTGGCAGA
AGAACATCACTCTTTGGCTCTACAAAGGAAATGCCTGCTGACCTGGTTCCAGTGTAGTCAGGAC
AGTCTGACTAGGAAGATGGCCCAGGCAGATCAATTTTATTCCCACATATTGCTTAGAAGAGTCT
TTCAGGGATGGCTACAGTACATGACTGATCTGGAGGAACAAGTGAGAAAACTTTGTGTACATTT
CCTTCAGAAGAGGATTTTCAGAGCCTGGTTTACAGTGGTCAAAGAGGCGAAGATTGATGCTCAG
AACAAGCACGAGATCTCAGTGGAACATAGTGACAGGAGGATTCTCAGCCAAGCATTTCAGACAT
GGAAGACATCTGTAAGATTTATGAAAGACGAAAGGGGGAAAGAAGAAAGGCGAGAGCAGCTCCG
CAGGAAGGTGGCTGAAATTCTCCCAGACTTCCAGATGTTGGCACCATCATGACTATTACTTACC
CCTTCAGTCAGATACTCATCCCTTGAGTAAGAGAAGTCTTTTGTGTACCCATAAATACAGATGC
AGTGGCCATTTGGTCCAGAATGTGTGTATATGTTATCTCTACCCACCCACGTACATTCCTGGAC
CTGGTCTGTTTCTGAGATACTTTGTTTTTGAACTTGTAATCCTCTTGCTAGTCATTTACTATAG
CATTTAGCACAGTGGGATCATATGAAGTTAGAGTCTAGGACACTACTATTCAAGTGTATCCTAT
ACACTTTTAGCATAGTAAACTTTAAAAAGGACAAGTCTTTGCCTGCTGAGCCTGTGAAGGAAAA
TATGTGTCCTTATATCTTAATTTGAGCTGTTGATAGAAACCTTCTACTTTAAATATAGTAAGTA
CTCAGAAAAGGAAGCATGGATGGTCAGAGTTTGAGGACAAGTGTCCTACAACACCCATCCCTTT
TTGGCCACCCCTTATGGCAAACCATGTAACACAGCTGCTTTGGAGGGTAGCAGCTTATCCTGAT
TTTTAGAGGAACTGGGTCAATGAATATAATATACCTTGATAAGCATAAATTCCAAAAGTTAATA
ACTCTGTCAAAGACAGTCCAGCAATCCATTAAAATATCTATTCATGCTCCCAATTGCAACTTCA
TATAAGCCACCGGATTTGTCTTCTAGTCCTCAGCTCAGTTTGATCTAGATGTTAAATTACTTAT
CTCTAAGGTACTTGAAGGTACACTGATAAAATGGTCTTGTCTTATAAGCTGTCTTAGAGAATTA
CCTGGTAGGAAAAAATTTTCATCACCAATACATGTTTATTGTGGCAATTCAAATAATCTACTAA
TACACATGGTAAAACAAGTAAGATCCTTGTCGCCCTGAGGGATCTGTTATATGGTGTGTTAGAA
ATGTGAATTGGTAAAATAAAGTCTTATGGTTTTTCAAGTGAAA
hide sequence
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| RefSeq Acc Id: |
XM_040270347 ⟹ XP_040126281 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,607 - 136,069,220 (+) | NCBI |
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| RefSeq Acc Id: |
XM_040270348 ⟹ XP_040126282 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,607 - 136,069,220 (+) | NCBI |
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| RefSeq Acc Id: |
XM_040270349 ⟹ XP_040126283 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,607 - 136,069,220 (+) | NCBI |
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| RefSeq Acc Id: |
XM_040270350 ⟹ XP_040126284 |
| Type: |
CODING |
| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
|---|
HiC_Itri_2 | NW_024405602 | 135,995,683 - 136,069,220 (+) | NCBI |
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| RefSeq Acc Id: |
XP_005327736 ⟸ XM_005327679 |
| - Peptide Label: |
isoform X1 |
| - UniProtKB: |
I3LWC4 (UniProtKB/TrEMBL) |
| - Sequence: |
MLLATQEKSTSKKRMGVNRWKQFTRKPNPKPVFDPDNVEHWIKRVEKASEFAVLNAFSARNLHL
PGRIQDQMIDLETSEQTVDHDEVYTEAQELVNDWLDTKLKQELASDGEGDSENTVTSSTAMPEA
SGHLKYDKFDDLYGYLEEEEESTTVQKFIDHLLHREVVDSGMLEDLGMKENQDKKQQKDPRLTM
EMRHKQVKENRLRREKELEYQKIEKALKKSAFLEAQYLVQEEKRRKALEAKKEKEDIQREMVKL
RREILERRRTVEEAWKIEKKRQEENFQKNPEKDMFPSAHVLLNEEKVAKERKRKLKELLIQTFK
ENHQCQKRYFSAWHKLILDHRIKLGKAGTLSDWKLQLKVLRAWRDYTRSQKLERETQALENDLR
EENRKQQLATEYNRKQVLQHCFAEWHHWCNAEVLKRELARAKEETRKKMDELLKAASLGKLSTS
GWSSGISVPEEATATVDSLVRNMEVTAVPSLSENSSLESNGCMLIPPPGKTTMSNLQCPLQNVS
QNIPDSKPKSLDAELSEQPSSEDKLRTTSHKAEPACVKHFCNRHVFQQQLIEKQKKKLQEQQKT
ILDLKEKQRLAEAQWAAKHAAVVTDAHNHLLLKSLGAEEPKGTCQMLLNSSVISRRTEGRSDSQ
NSLSGPKRNPKQLKAPHPILKAMEERAIQRAERRQILAERKKKLEEEKLAQLKAQEEERQKREA
EEKEAQLERKREEKRLKKMKELEKQKRIKRNQELEAVATEHYKKLLLRKKGLEPWKRLRMQSKQ
NTQVAEEHHSLALQRKCLLTWFQCSQDSLTRKMAQADQFYSHILLRRVFQGWLQYMTDLEEQVR
KLCVHFLQKRIFRAWFTVVKEAKIDAQNKHEISVEHSDRRILSQAFQTWKTSVRFMKDERGKEE
RREQLRRKVAEILPDFQMLAPS
hide sequence
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| RefSeq Acc Id: |
XP_040126283 ⟸ XM_040270349 |
| - Peptide Label: |
isoform X4 |
| RefSeq Acc Id: |
XP_040126282 ⟸ XM_040270348 |
| - Peptide Label: |
isoform X3 |
| RefSeq Acc Id: |
XP_040126281 ⟸ XM_040270347 |
| - Peptide Label: |
isoform X2 |
| RefSeq Acc Id: |
XP_040126284 ⟸ XM_040270350 |
| - Peptide Label: |
isoform X5 |
| RefSeq Acc Id: |
ENSSTOP00000000268 ⟸ ENSSTOT00000000300 |
Additional Information
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