LOC101965577 (glyceraldehyde-3-phosphate dehydrogenase-like) - Rat Genome Database

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Pathways
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Gene: LOC101965577 (glyceraldehyde-3-phosphate dehydrogenase-like) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101965577
Name: glyceraldehyde-3-phosphate dehydrogenase-like
RGD ID: 12467595
Description: ENCODES a protein that exhibits glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (inferred); NAD binding (inferred); nucleotide binding (inferred); INVOLVED IN apoptotic process (inferred); glycolytic process (inferred); regulation of translation (inferred); FOUND IN cytoskeleton (inferred); cytosol (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213113,793,877 - 113,827,925 (+)NCBIHiC_Itri_2
SpeTri2.0NW_004936647829,278 - 830,661 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoskeleton  (IEA)
cytosol  (IEA)
nucleus  (IEA)

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_013363112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010002273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_013363112   ⟹   XP_013218566
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024407213113,793,877 - 113,827,925 (+)NCBI
SpeTri2.0NW_004936647829,278 - 830,661 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013218566 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000023094.2
Reference Protein Sequences
RefSeq Acc Id: XP_013218566   ⟸   XM_013363112
- UniProtKB: I3NFE7 (UniProtKB/TrEMBL)
- Sequence:
Protein Domains
Glyceraldehyde 3-phosphate dehydrogenase NAD(P)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000023113 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000026970.2 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/TrEMBL
InterPro GlycerAld/Erythrose_P_DH UniProtKB/TrEMBL
  GlycerAld_3-P_DH_AS UniProtKB/TrEMBL
  GlycerAld_3-P_DH_cat UniProtKB/TrEMBL
  GlycerAld_3-P_DH_NAD(P)-bd UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC101965577 ENTREZGENE
PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE UniProtKB/TrEMBL
  PTHR10836 UniProtKB/TrEMBL
Pfam Gp_dh_C UniProtKB/TrEMBL
  Gp_dh_N UniProtKB/TrEMBL
PIRSF GAP_DH UniProtKB/TrEMBL
PRINTS G3PDHDRGNASE UniProtKB/TrEMBL
PROSITE GAPDH UniProtKB/TrEMBL
SMART Gp_dh_N UniProtKB/TrEMBL
Superfamily-SCOP Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain UniProtKB/TrEMBL
  SSF51735 UniProtKB/TrEMBL
UniProt I3NFE7 ENTREZGENE, UniProtKB/TrEMBL