Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Shmt2 (serine hydroxymethyltransferase 2) Ictidomys tridecemlineatus
Analyze
Symbol: Shmt2
Name: serine hydroxymethyltransferase 2
Description: ENCODES a protein that exhibits amino acid binding (ortholog); chromatin binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN glycine biosynthetic process (ortholog); glycine biosynthetic process from serine (ortholog); glycine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN BRISC complex (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: serine hydroxymethyltransferase, mitochondrial
Orthologs:
Homo sapiens (human) : SHMT2 (serine hydroxymethyltransferase 2)  HGNC  Alliance
Mus musculus (house mouse) : Shmt2 (serine hydroxymethyltransferase 2 (mitochondrial))  MGI  Alliance
Rattus norvegicus (Norway rat) : Shmt2 (serine hydroxymethyltransferase 2)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Shmt2 (serine hydroxymethyltransferase 2)
Pan paniscus (bonobo/pygmy chimpanzee) : SHMT2 (serine hydroxymethyltransferase 2)
Canis lupus familiaris (dog) : SHMT2 (serine hydroxymethyltransferase 2)
Sus scrofa (pig) : SHMT2 (serine hydroxymethyltransferase 2)
Chlorocebus sabaeus (African green monkey) : SHMT2 (serine hydroxymethyltransferase 2)
Heterocephalus glaber (naked mole-rat) : Shmt2 (serine hydroxymethyltransferase 2)
more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366461,422,844 - 1,427,929 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations

Genomics

Comparative Map Data

Expression


Sequence

Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
 
More on Shmt2
NCBI Gene
Ensembl Gene
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 12466279
Created: 2017-01-27
Species: Ictidomys tridecemlineatus
Last Modified: 2019-11-27
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.