Il36b (interleukin 36 beta) - Rat Genome Database

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Gene: Il36b (interleukin 36 beta) Ictidomys tridecemlineatus
Analyze
Symbol: Il36b
Name: interleukin 36 beta
RGD ID: 12464350
Description: ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production (ortholog); positive regulation of interleukin-6 production (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH endometriosis (ortholog); genetic disease (ortholog); High Myopia (ortholog); FOUND IN extracellular space (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: interleukin 36, beta; interleukin-36 beta
RGD Orthologs
Human
Mouse
Rat
Dog
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629282,490,126 - 82,495,072 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367831,384,796 - 1,388,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
Il36b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629282,490,126 - 82,495,072 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049367831,384,796 - 1,388,507 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL36B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382113,022,089 - 113,052,867 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2113,022,089 - 113,052,867 (-)EnsemblGRCh38hg38GRCh38
GRCh372113,779,666 - 113,810,444 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362113,496,139 - 113,526,911 (-)NCBINCBI36Build 36hg18NCBI36
Build 342113,501,366 - 113,526,671NCBI
Celera2107,164,821 - 107,195,607 (-)NCBICelera
Cytogenetic Map2q14.1NCBI
HuRef2106,234,584 - 106,265,349 (-)NCBIHuRef
CHM1_12113,783,819 - 113,814,595 (-)NCBICHM1_1
T2T-CHM13v2.02113,448,613 - 113,479,393 (-)NCBIT2T-CHM13v2.0
Il36b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39224,043,184 - 24,050,115 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl224,043,173 - 24,050,531 (+)EnsemblGRCm39 Ensembl
GRCm38224,153,172 - 24,160,103 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl224,153,161 - 24,160,519 (+)EnsemblGRCm38mm10GRCm38
MGSCv37224,008,692 - 24,015,623 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36223,975,176 - 23,982,528 (+)NCBIMGSCv36mm8
Celera223,880,886 - 23,887,820 (+)NCBICelera
Cytogenetic Map2A3NCBI
cM Map216.21NCBI
Il36b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8327,422,980 - 27,521,344 (-)NCBIGRCr8
mRatBN7.237,024,881 - 7,030,388 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl37,021,973 - 7,031,619 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx310,126,429 - 10,131,944 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0318,712,656 - 18,718,171 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0316,902,467 - 16,907,982 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.031,366,123 - 1,464,851 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl31,366,119 - 1,371,626 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.031,359,278 - 1,457,679 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.432,510,815 - 2,515,661 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.132,510,821 - 2,517,016 (-)NCBI
Celera31,862,042 - 1,866,888 (-)NCBICelera
Cytogenetic Map3p13NCBI
IL36B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11737,159,276 - 37,165,841 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1737,159,434 - 37,165,423 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1736,929,297 - 36,935,851 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01737,936,146 - 37,942,700 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1737,936,072 - 37,942,708 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11737,071,575 - 37,078,126 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01737,128,064 - 37,134,618 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01737,341,855 - 37,348,408 (+)NCBIUU_Cfam_GSD_1.0
IL36B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11416,043,133 - 16,054,750 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660803,627,800 - 3,636,821 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il36b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474913,107,596 - 13,128,883 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005340259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAESOR010001352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_005340259   ⟹   XP_005340316
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440629282,490,126 - 82,495,072 (-)NCBI
SpeTri2.0NW_0049367831,384,796 - 1,388,507 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005340316 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3268008 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_005340316   ⟸   XM_005340259
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene Il36b ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-09-26 Il36b  interleukin 36 beta    interleukin 36, beta  Symbol and/or name change 5135510 APPROVED