Nudt2 (nudix hydrolase 2) - Rat Genome Database

Name: Nudt2
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Nudt2 (nudix hydrolase 2) Ictidomys tridecemlineatus

Analyze

Symbol:

Nudt2

Name:

nudix hydrolase 2

RGD ID:

12461585

Description:

ENCODES a protein that exhibits bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (inferred); bis(5'-nucleosyl)-tetraphosphatase activity (inferred); hydrolase activity (inferred); INVOLVED IN AMP biosynthetic process (inferred); ATP biosynthetic process (inferred); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acromesomelic dysplasia, Maroteaux type (ortholog); Breast Neoplasms (ortholog); distal arthrogryposis type 1A (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]; nudix hydrolase 2, transcript variant X1; nudix hydrolase 2, transcript variant X2; nudix hydrolase 2, transcript variant X3; nudix hydrolase 2, transcript variant X4

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NUDT2 (nudix hydrolase 2)	NCBI	Ortholog
Mus musculus (house mouse):	Nudt2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nudt2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nudt2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NUDT2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	NUDT2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NUDT2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103219273 (bis(5'-nucleosyl)-tetraphosphatase [asymmetrical])	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nudt2 (nudix hydrolase 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	165,891,335 - 165,905,018 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	2,441,860 - 2,454,174 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	2,438,947 - 2,452,647 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acromesomelic dysplasia, Maroteaux type (ISO)

Breast Neoplasms (ISO)

distal arthrogryposis type 1A (ISO)

Episodic Ataxia Type 9 (ISO)

frontotemporal dementia and/or amyotrophic lateral sclerosis 6 (ISO)

galactosemia (ISO)

genetic disease (ISO)

INTELLECTUAL DEVELOPMENTAL DISORDER WITH OR WITHOUT PERIPHERAL NEUROPATHY (ISO)

intellectual disability (ISO)

primary ciliary dyskinesia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

AMP biosynthetic process (IEA)

ATP biosynthetic process (IEA)

Molecular Function

bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (IEA)

bis(5'-nucleosyl)-tetraphosphatase activity (IEA)

hydrolase activity (IEA)

nucleotide binding (IEA)

protein binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

adenine phoshoribosyltransferase deficiency pathway (ISO)

adenosine monophosphate deaminase deficiency pathway (ISO)

adenylosuccinate lyase deficiency pathway (ISO)

AICA-ribosuria pathway (ISO)

azathioprine pharmacodynamics pathway (ISO)

Kelley-Seegmiller syndrome pathway (ISO)

Lesch-Nyhan syndrome pathway (ISO)

mercaptopurine pharmacodynamics pathway (ISO)

molybdenum cofactor deficiency pathway (ISO)

purine metabolic pathway (ISO)

purine nucleoside phosphorylase deficiency pathway (ISO)

tioguanine pharmacodynamics pathway (ISO)

xanthinuria type I pathway (ISO)

xanthinuria pathway (ISO)

xanthinuria type II pathway (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Nudt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	165,891,335 - 165,905,018 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936524	2,441,860 - 2,454,174 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936524	2,438,947 - 2,452,647 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NUDT2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	34,329,569 - 34,343,699 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	34,329,506 - 34,343,711 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	34,329,567 - 34,343,697 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	34,319,504 - 34,333,696 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	34,319,503 - 34,333,696	NCBI
Celera	9	34,261,031 - 34,275,223 (+)	NCBI		Celera
Cytogenetic Map	9	p13.3	NCBI
HuRef	9	34,284,744 - 34,298,958 (+)	NCBI		HuRef
CHM1_1	9	34,328,965 - 34,343,459 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	34,348,133 - 34,362,241 (+)	NCBI		T2T-CHM13v2.0

Nudt2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	41,465,085 - 41,480,926 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	41,465,151 - 41,480,926 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	41,465,081 - 41,480,926 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	41,465,151 - 41,480,926 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	41,412,181 - 41,427,959 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	41,653,819 - 41,669,597 (+)	NCBI		MGSCv36	mm8
Celera	4	41,126,503 - 41,142,238 (+)	NCBI		Celera
Cytogenetic Map	4	A5	NCBI
cM Map	4	21.65	NCBI

Nudt2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	61,424,176 - 61,439,018 (+)	NCBI		GRCr8
mRatBN7.2	5	56,628,265 - 56,643,104 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	56,628,265 - 56,643,104 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	58,610,809 - 58,625,618 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	60,429,611 - 60,444,420 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	60,410,289 - 60,425,109 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	57,845,819 - 57,860,658 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	57,845,819 - 57,860,658 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	62,373,683 - 62,388,703 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	58,887,126 - 58,901,965 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	58,887,304 - 58,902,144 (+)	NCBI
Celera	5	55,224,185 - 55,239,014 (+)	NCBI		Celera
Cytogenetic Map	5	q22	NCBI

Nudt2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955472	1,759,900 - 1,774,539 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955472	1,760,046 - 1,774,539 (-)	NCBI	ChiLan1.0	ChiLan1.0

NUDT2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	90,260,687 - 90,274,948 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	90,266,630 - 90,280,888 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	34,165,452 - 34,179,722 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	34,974,218 - 34,988,453 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	34,974,240 - 34,988,453 (+)	Ensembl	panpan1.1		panPan2

NUDT2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	51,049,992 - 51,064,317 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	51,050,053 - 51,064,178 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	49,679,551 - 49,693,877 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	51,991,703 - 52,006,029 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	51,860,446 - 52,008,042 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	50,654,675 - 50,668,990 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	50,522,494 - 50,536,832 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	51,287,553 - 51,301,886 (+)	NCBI		UU_Cfam_GSD_1.0

NUDT2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	32,451,064 - 32,466,839 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	32,450,986 - 32,466,893 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	36,618,569 - 36,654,875 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103219273
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	46,260,652 - 46,274,678 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666226	9,862 - 23,828 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nudt2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	38,744,895 - 38,761,499 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	38,745,476 - 38,761,156 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005326201	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005326203	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021726929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021726930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285930	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000010100 ⟹ ENSSTOP00000009060

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936524	2,441,860 - 2,454,174 (+)	Ensembl

RefSeq Acc Id:

XM_005326201 ⟹ XP_005326258

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	165,891,335 - 165,905,018 (+)	NCBI
SpeTri2.0	NW_004936524	2,438,947 - 2,452,647 (+)	NCBI

Sequence:

show sequence

TACCCAATACTGAAGGGCTACGGAACTACGATGCAGCTGTCTTGATTGGCCGGTGTACTTCCGG
CCTCCGTTGAAGACCCACTTCCTGCCTCTCTTTTGCTTCGGTTCTTAGATAGACCATGGCCCTG
AGAGCATGTGGCTTGATCATCTTCCGAAGACGCCTTATTCCCAAGGTGGACAACGATTCAATTG
AATTTCTACTGCTGCAGGCATCAAATGGCATTCATCACTGGACTCCTCCCAAAGGCCATGTGGA
CCCAGGAGAGAATGACTTGGAGACAGCCCTAAGAGAGACTCGGGAGGAAGCAGGAATAGAAGCT
CACCAGCTGACCATCATTGAGGGGTTCAGAAAGGAGCTCAATTATGTTGCATGGCAGAAGCCTA
AAACAGTCATTTACTGGCTGGCAGAAGTGAAGGACTACGATGTGGAGATCCGCCTCTCCAATGA
ACACCAAGCCTACCGCTGGCTGGGGCTGGATGAGGCCTGCCAGTTGGCTGAGTTCAAGGAGATG
AAGGCAGCACTCCAAGAAGGACACCATTTTCTTTGCTCCACAGCGGCCTAAGCTGACCAGAGCA
GTCATTTGCTTCCAAAGGATTCTTGAGGGCTGTTGGAAATTAACCCTGCCCTTTGGTCCAAGGA
AAGATATGCGGGTCTTTGGCTTGTTACAGACAAGAGCAGAAAGTTTACTGAAGTCAGTTTAGGA
TTGTCAAATGAGAACAAGTAAGAAAATTAGCTGAGTGAAAAGACAAAGTATTAAAAAAAAAAAA
ACCACAACAGTAAGTGCATTTTTTACTTTATAAATAAACCTCAAGTAGCTTATCTGTC

hide sequence

RefSeq Acc Id:

XM_005326203 ⟹ XP_005326260

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	165,891,358 - 165,905,018 (+)	NCBI
SpeTri2.0	NW_004936524	2,438,966 - 2,452,647 (+)	NCBI

Sequence:

show sequence

ACGGAACTACGATGCAGCTGTCTTGATTGGCCGGTGTACTTCCGGCCTCCGTTGAAGACCCACT
TCCTGCCTCTCTTTTGCTTCGGCCAGATAGCAAAGATCGCAAAATGACTCAGCAGTTTATTCTC
TGAGAAGAAGGAAATGGTAGATGTCCAGAAAAAGATTTTTTCTAACCACCTCAGGCGTTCTGCC
ACTTTTCTGAAGTGTGAATTGCCTGCTGTCAGCCTGGAGTTCTCACCTCTGCAATCCTGGCTGC
AGGCATATTTGCATATTGGATGCTATGTTCTTTAACCCCCTGAGGTTTGAATGGGCTTGGAGTC
TGTGTGAAAGCTGGCTCCTTTCAAACCCCTGGACAGTTTCAGTTCTCTGGTCTCCAGAAAAACA
GAAAACCCCAACAATAGCGCCATTGACTTTTATGTAAATGGTACTCTTCTGGAAGACACTGGGC
TATTTCCCAGGGCCCCAGAACATACTCAAACATTTGTTTGAGTGGGAGGTGGGGGAGAAAGTTC
TGTTGAGTCAATGAACATCTGTTGAGATCTGCTATGCTGAGTCCCAGTGAAACAGAGCTCAGTC
TGGCTCTTCCTTGCCAGAGGAAGATTTGCCAACATAGAATTACCATACTAGTTCTTAGATAGAC
CATGGCCCTGAGAGCATGTGGCTTGATCATCTTCCGAAGACGCCTTATTCCCAAGGTGGACAAC
GATTCAATTGAATTTCTACTGCTGCAGGCATCAAATGGCATTCATCACTGGACTCCTCCCAAAG
GCCATGTGGACCCAGGAGAGAATGACTTGGAGACAGCCCTAAGAGAGACTCGGGAGGAAGCAGG
AATAGAAGCTCACCAGCTGACCATCATTGAGGGGTTCAGAAAGGAGCTCAATTATGTTGCATGG
CAGAAGCCTAAAACAGTCATTTACTGGCTGGCAGAAGTGAAGGACTACGATGTGGAGATCCGCC
TCTCCAATGAACACCAAGCCTACCGCTGGCTGGGGCTGGATGAGGCCTGCCAGTTGGCTGAGTT
CAAGGAGATGAAGGCAGCACTCCAAGAAGGACACCATTTTCTTTGCTCCACAGCGGCCTAAGCT
GACCAGAGCAGTCATTTGCTTCCAAAGGATTCTTGAGGGCTGTTGGAAATTAACCCTGCCCTTT
GGTCCAAGGAAAGATATGCGGGTCTTTGGCTTGTTACAGACAAGAGCAGAAAGTTTACTGAAGT
CAGTTTAGGATTGTCAAATGAGAACAAGTAAGAAAATTAGCTGAGTGAAAAGACAAAGTATTAA
AAAAAAAAAAACCACAACAGTAAGTGCATTTTTTACTTTATAAATAAACCTCAAGTAGCTTATC
TGTC

hide sequence

RefSeq Acc Id:

XM_021726929 ⟹ XP_021582604

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	165,891,358 - 165,905,018 (+)	NCBI
SpeTri2.0	NW_004936524	2,438,966 - 2,452,647 (+)	NCBI

Sequence:

show sequence

ACGGAACTACGATGCAGCTGTCTTGATTGGCCGGTGTACTTCCGGCCTCCGTTGAAGACCCACT
TCCTGCCTCTCTTTTGCTTCGGCCAGATAGCAAAGATCGCAAAATGACTCAGCAGTTTATTCTC
TGAGAAGAAGGAAATGGTAGATGTCCAGAAAAAGTTCTTAGATAGACCATGGCCCTGAGAGCAT
GTGGCTTGATCATCTTCCGAAGACGCCTTATTCCCAAGGTGGACAACGATTCAATTGAATTTCT
ACTGCTGCAGGCATCAAATGGCATTCATCACTGGACTCCTCCCAAAGGCCATGTGGACCCAGGA
GAGAATGACTTGGAGACAGCCCTAAGAGAGACTCGGGAGGAAGCAGGAATAGAAGCTCACCAGC
TGACCATCATTGAGGGGTTCAGAAAGGAGCTCAATTATGTTGCATGGCAGAAGCCTAAAACAGT
CATTTACTGGCTGGCAGAAGTGAAGGACTACGATGTGGAGATCCGCCTCTCCAATGAACACCAA
GCCTACCGCTGGCTGGGGCTGGATGAGGCCTGCCAGTTGGCTGAGTTCAAGGAGATGAAGGCAG
CACTCCAAGAAGGACACCATTTTCTTTGCTCCACAGCGGCCTAAGCTGACCAGAGCAGTCATTT
GCTTCCAAAGGATTCTTGAGGGCTGTTGGAAATTAACCCTGCCCTTTGGTCCAAGGAAAGATAT
GCGGGTCTTTGGCTTGTTACAGACAAGAGCAGAAAGTTTACTGAAGTCAGTTTAGGATTGTCAA
ATGAGAACAAGTAAGAAAATTAGCTGAGTGAAAAGACAAAGTATTAAAAAAAAAAAAACCACAA
CAGTAAGTGCATTTTTTACTTTATAAATAAACCTCAAGTAGCTTATCTGTC

hide sequence

RefSeq Acc Id:

XM_021726930 ⟹ XP_021582605

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	165,891,357 - 165,905,018 (+)	NCBI
SpeTri2.0	NW_004936524	2,438,966 - 2,452,647 (+)	NCBI

Sequence:

show sequence

ACGGAACTACGATGCAGCTGTCTTGATTGGCCGGTGTACTTCCGGCCTCCGTTGAAGACCCACT
TCCTGCCTCTCTTTTGCTTCGGCTCTGCTTCTCTGACTGAACTCTGTAGTAAAAGTTTGTCGAG
TAATTAGAAACCAGAAGGCTTCACAGGTAAAGGTAACATTTGAGCTGCTTCAGAAGGGTTCTTA
GATAGACCATGGCCCTGAGAGCATGTGGCTTGATCATCTTCCGAAGACGCCTTATTCCCAAGGT
GGACAACGATTCAATTGAATTTCTACTGCTGCAGGCATCAAATGGCATTCATCACTGGACTCCT
CCCAAAGGCCATGTGGACCCAGGAGAGAATGACTTGGAGACAGCCCTAAGAGAGACTCGGGAGG
AAGCAGGAATAGAAGCTCACCAGCTGACCATCATTGAGGGGTTCAGAAAGGAGCTCAATTATGT
TGCATGGCAGAAGCCTAAAACAGTCATTTACTGGCTGGCAGAAGTGAAGGACTACGATGTGGAG
ATCCGCCTCTCCAATGAACACCAAGCCTACCGCTGGCTGGGGCTGGATGAGGCCTGCCAGTTGG
CTGAGTTCAAGGAGATGAAGGCAGCACTCCAAGAAGGACACCATTTTCTTTGCTCCACAGCGGC
CTAAGCTGACCAGAGCAGTCATTTGCTTCCAAAGGATTCTTGAGGGCTGTTGGAAATTAACCCT
GCCCTTTGGTCCAAGGAAAGATATGCGGGTCTTTGGCTTGTTACAGACAAGAGCAGAAAGTTTA
CTGAAGTCAGTTTAGGATTGTCAAATGAGAACAAGTAAGAAAATTAGCTGAGTGAAAAGACAAA
GTATTAAAAAAAAAAAAACCACAACAGTAAGTGCATTTTTTACTTTATAAATAAACCTCAAGTA
GCTTATCTGTC

hide sequence

RefSeq Acc Id:

XM_040285930 ⟹ XP_040141864

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	165,891,358 - 165,905,018 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005326258	(Get FASTA)	NCBI Sequence Viewer
	XP_005326260	(Get FASTA)	NCBI Sequence Viewer
	XP_021582604	(Get FASTA)	NCBI Sequence Viewer
	XP_021582605	(Get FASTA)	NCBI Sequence Viewer
	XP_040141864	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000009060.2
GenBank Protein	KAG3287402	(Get FASTA)	NCBI Sequence Viewer
	KAG3287403	(Get FASTA)	NCBI Sequence Viewer
	KAG3287404	(Get FASTA)	NCBI Sequence Viewer
	KAG3287405	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005326258 ⟸ XM_005326201
- UniProtKB:	I3MEU0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALRACGLIIFRRRLIPKVDNDSIEFLLLQASNGIHHWTPPKGHVDPGENDLETALRETREEAG IEAHQLTIIEGFRKELNYVAWQKPKTVIYWLAEVKDYDVEIRLSNEHQAYRWLGLDEACQLAEF KEMKAALQEGHHFLCSTAA hide sequence

RefSeq Acc Id:	XP_005326260 ⟸ XM_005326203
- UniProtKB:	I3MEU0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALRACGLIIFRRRLIPKVDNDSIEFLLLQASNGIHHWTPPKGHVDPGENDLETALRETREEAG IEAHQLTIIEGFRKELNYVAWQKPKTVIYWLAEVKDYDVEIRLSNEHQAYRWLGLDEACQLAEF KEMKAALQEGHHFLCSTAA hide sequence

RefSeq Acc Id:	XP_021582604 ⟸ XM_021726929
- UniProtKB:	I3MEU0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALRACGLIIFRRRLIPKVDNDSIEFLLLQASNGIHHWTPPKGHVDPGENDLETALRETREEAG IEAHQLTIIEGFRKELNYVAWQKPKTVIYWLAEVKDYDVEIRLSNEHQAYRWLGLDEACQLAEF KEMKAALQEGHHFLCSTAA hide sequence

RefSeq Acc Id:	XP_021582605 ⟸ XM_021726930
- UniProtKB:	I3MEU0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALRACGLIIFRRRLIPKVDNDSIEFLLLQASNGIHHWTPPKGHVDPGENDLETALRETREEAG IEAHQLTIIEGFRKELNYVAWQKPKTVIYWLAEVKDYDVEIRLSNEHQAYRWLGLDEACQLAEF KEMKAALQEGHHFLCSTAA hide sequence

RefSeq Acc Id:	XP_040141864 ⟸ XM_040285930
- UniProtKB:	I3MEU0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000009060 ⟸ ENSSTOT00000010100

Protein Domains

Nudix hydrolase

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000010108	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000010100.3	UniProtKB/TrEMBL
Gene3D-CATH	Nucleoside Triphosphate Pyrophosphohydrolase	UniProtKB/TrEMBL
InterPro	NUDIX_hydrolase-like_dom_sf	UniProtKB/TrEMBL
	NUDIX_hydrolase_CS	UniProtKB/TrEMBL
	NUDIX_hydrolase_dom	UniProtKB/TrEMBL
	Tetra_PHTase	UniProtKB/TrEMBL
NCBI Gene	Nudt2	ENTREZGENE
PANTHER	BIS(5'-NUCLEOSYL)-TETRAPHOSPHATASE [ASYMMETRICAL]	UniProtKB/TrEMBL
	DIADENOSINE 5,5-P1,P4-TETRAPHOSPHATE PYROPHOSPHOHYDROLASE MUTT	UniProtKB/TrEMBL
Pfam	NUDIX	UniProtKB/TrEMBL
PRINTS	TETRPHPHTASE	UniProtKB/TrEMBL
PROSITE	NUDIX	UniProtKB/TrEMBL
	NUDIX_BOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF55811	UniProtKB/TrEMBL
UniProt	I3MEU0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB