Uts2r (urotensin 2 receptor) - Rat Genome Database

Name: Uts2r
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: Uts2r (urotensin 2 receptor) Ictidomys tridecemlineatus

Analyze

Symbol:

Uts2r

Name:

urotensin 2 receptor

RGD ID:

12458556

Description:

ENCODES a protein that exhibits urotensin II receptor activity (ortholog); INVOLVED IN negative regulation of blood pressure (ortholog); negative regulation of glomerular filtration (ortholog); negative regulation of urine volume (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); cardiomyopathy (ortholog); Diabetic Nephropathies (ortholog); FOUND IN early endosome (ortholog); recycling endosome (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

urotensin-2 receptor

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UTS2R (urotensin 2 receptor)	NCBI	Ortholog
Mus musculus (house mouse):	Uts2r (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Uts2r (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Uts2r (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UTS2R (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	UTS2R (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	UTS2R (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	UTS2R (urotensin 2 receptor)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	541,802 - 546,097 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936923	24,952 - 31,083 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute kidney failure (ISO)

cardiomyopathy (ISO)

Diabetic Nephropathies (ISO)

endomyocardial fibrosis (ISO)

Experimental Diabetes Mellitus (ISO)

hypertension (ISO)

myocardial infarction (ISO)

Myocardial Reperfusion Injury (ISO)

type 2 diabetes mellitus (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of blood pressure (ISO)

negative regulation of glomerular filtration (ISO)

negative regulation of urine volume (ISO)

positive regulation of angiogenesis (ISO)

positive regulation of blood pressure (ISO)

positive regulation of cell growth (ISO)

positive regulation of circadian sleep/wake cycle, REM sleep (ISO)

positive regulation of circadian sleep/wake cycle, wakefulness (ISO)

positive regulation of cytosolic calcium ion concentration (ISO)

positive regulation of fibroblast proliferation (ISO)

positive regulation of vasoconstriction (ISO)

response to xenobiotic stimulus (ISO)

Cellular Component

early endosome (ISO)

recycling endosome (ISO)

Molecular Function

urotensin II receptor activity (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Uts2r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	541,802 - 546,097 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936923	24,952 - 31,083 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UTS2R
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	82,371,765 - 82,377,458 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	82,371,765 - 82,377,458 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	80,329,641 - 80,335,334 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	77,925,490 - 77,926,659 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	77,925,489 - 77,926,659	NCBI
Celera	17	76,924,342 - 76,925,511 (+)	NCBI		Celera
Cytogenetic Map	17	q25.3	NCBI
HuRef	17	75,730,768 - 75,731,937 (+)	NCBI		HuRef
CHM1_1	17	80,417,675 - 80,418,844 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	83,240,931 - 83,246,624 (+)	NCBI		T2T-CHM13v2.0

Uts2r
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	121,051,097 - 121,052,799 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	121,051,097 - 121,052,799 (+)	Ensembl		GRCm39 Ensembl
GRCm38	11	121,160,271 - 121,161,973 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	121,160,271 - 121,161,973 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	121,021,585 - 121,023,287 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	120,976,361 - 120,978,063 (+)	NCBI		MGSCv36	mm8
Celera	11	132,898,462 - 132,900,164 (+)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	85.02	NCBI

Uts2r
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	106,936,398 - 106,937,558 (+)	NCBI		GRCr8
mRatBN7.2	10	106,438,092 - 106,439,252 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	106,438,092 - 106,439,252 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	111,540,796 - 111,541,956 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	111,003,849 - 111,005,009 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	106,358,527 - 106,359,687 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	110,364,291 - 110,365,451 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	110,364,291 - 110,365,451 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	109,951,008 - 109,952,168 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	110,394,782 - 110,395,942 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	110,409,285 - 110,410,446 (+)	NCBI
Celera	10	104,976,678 - 104,977,838 (+)	NCBI		Celera
Cytogenetic Map	10	q32.3	NCBI

Uts2r
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955506	756,859 - 761,891 (-)	NCBI	ChiLan1.0	ChiLan1.0

UTS2R
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	98,913,633 - 98,918,934 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	103,817,766 - 103,823,271 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	76,783,432 - 76,788,639 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	82,592,312 - 82,593,702 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	82,592,312 - 82,593,702 (+)	Ensembl	panpan1.1		panPan2

UTS2R
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Dog10K_Boxer_Tasha	9	587,915 - 589,510 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	579,205 - 580,800 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	579,646 - 580,884 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	573,778 - 575,373 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	734,681 - 736,277 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	809,533 - 811,128 (-)	NCBI		UU_Cfam_GSD_1.0

UTS2R
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1	12	695,765 - 700,678 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	9,985 - 13,120 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UTS2R
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	74,284,472 - 74,291,074 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	74,288,333 - 74,289,502 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	45,928,730 - 45,935,411 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021721231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040268309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_040268309 ⟹ XP_040124243

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	541,802 - 546,097 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_040124243	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	KAG3268227	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_040124243 ⟸ XM_040268309

Additional Information

External Database Links

Database	Acc Id	Source(s)
NCBI Gene	Uts2r	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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