Slc16a7 (solute carrier family 16 member 7) - Rat Genome Database

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Gene: Slc16a7 (solute carrier family 16 member 7) Ictidomys tridecemlineatus
Analyze
Symbol: Slc16a7
Name: solute carrier family 16 member 7
RGD ID: 12455982
Description: ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: monocarboxylate transporter 2; solute carrier family 16 member 7, transcript variant X1; solute carrier family 16 member 7, transcript variant X2; solute carrier family 16 member 7, transcript variant X3; solute carrier family 16 member 7, transcript variant X4; solute carrier family 16 member 7, transcript variant X5; solute carrier family 16 member 7, transcript variant X6
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
obesity  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Genomics

Comparative Map Data
Slc16a7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLC16A7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1259,596,029 - 59,789,855 (+)EnsemblGRCh38hg38GRCh38
GRCh381259,595,934 - 59,789,841 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371259,989,810 - 60,183,622 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361258,369,393 - 58,461,675 (+)NCBINCBI36hg18NCBI36
Build 341258,369,392 - 58,461,674NCBI
Celera1259,745,720 - 59,838,012 (+)NCBI
Cytogenetic Map12q14.1NCBI
HuRef1257,038,268 - 57,232,240 (+)NCBIHuRef
CHM1_11259,958,039 - 60,151,803 (+)NCBICHM1_1
Slc16a7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3910125,055,139 - 125,225,455 (-)NCBIGRCm39mm39
GRCm39 Ensembl10125,055,139 - 125,225,334 (-)Ensembl
GRCm3810125,219,270 - 125,389,586 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl10125,219,270 - 125,389,465 (-)EnsemblGRCm38mm10GRCm38
MGSCv3710124,664,541 - 124,765,591 (-)NCBIGRCm37mm9NCBIm37
MGSCv3610124,630,545 - 124,731,595 (-)NCBImm8
Celera10127,630,780 - 127,731,940 (-)NCBICelera
Cytogenetic Map10D3NCBI
Slc16a7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2761,043,667 - 61,211,547 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl761,051,167 - 61,154,994 (-)Ensembl
Rnor_6.0768,438,341 - 68,606,312 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl768,446,193 - 68,549,763 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0768,633,417 - 68,801,189 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4765,210,148 - 65,313,572 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1765,230,721 - 65,390,741 (-)NCBI
Celera758,206,868 - 58,309,915 (-)NCBICelera
Cytogenetic Map7q22NCBI
Slc16a7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554587,232,886 - 7,352,782 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554587,232,886 - 7,352,782 (+)NCBIChiLan1.0ChiLan1.0
SLC16A7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11229,390,576 - 29,587,897 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1229,390,576 - 29,528,851 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01229,128,600 - 29,317,797 (-)NCBIMhudiblu_PPA_v0panPan3
SLC16A7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1103,333,000 - 3,500,684 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl103,334,126 - 3,496,150 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha103,398,668 - 3,564,721 (+)NCBI
ROS_Cfam_1.0103,356,472 - 3,522,599 (+)NCBI
UMICH_Zoey_3.1103,323,639 - 3,489,625 (+)NCBI
UNSW_CanFamBas_1.0103,565,685 - 3,731,591 (+)NCBI
UU_Cfam_GSD_1.0103,691,746 - 3,857,780 (+)NCBI
SLC16A7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl524,713,267 - 24,875,003 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1524,713,009 - 24,871,891 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2526,710,139 - 26,864,757 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLC16A7
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11155,541,313 - 55,709,102 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1155,645,129 - 55,708,356 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666037190,169,996 - 190,345,973 (-)NCBIVero_WHO_p1.0
Slc16a7
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248028,015,061 - 8,191,031 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005335709   ⟹   XP_005335766
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049366463,482,395 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013363053   ⟹   XP_013218507
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013363054   ⟹   XP_013218508
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
SpeTri2.0NW_0049366463,482,148 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_013363055   ⟹   XP_013218509
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,387,878 (-)NCBI
SpeTri2.0NW_0049366463,482,395 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021733546   ⟹   XP_021589221
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,387,848 (-)NCBI
SpeTri2.0NW_0049366463,482,395 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021733547   ⟹   XP_021589222
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,326,926 (-)NCBI
SpeTri2.0NW_0049366463,542,410 - 3,647,466 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040280397   ⟹   XP_040136331
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,222,734 - 55,387,078 (-)NCBI
RefSeq Acc Id: XM_040280398   ⟹   XP_040136332
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,385,725 (-)NCBI
RefSeq Acc Id: XM_040280399   ⟹   XP_040136333
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
RefSeq Acc Id: XM_040280400   ⟹   XP_040136334
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494555,219,046 - 55,388,105 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_013218508   ⟸   XM_013363054
- Sequence:
RefSeq Acc Id: XP_013218507   ⟸   XM_013363053
- Sequence:
RefSeq Acc Id: XP_005335766   ⟸   XM_005335709
- Sequence:
RefSeq Acc Id: XP_013218509   ⟸   XM_013363055
- Sequence:
RefSeq Acc Id: XP_021589221   ⟸   XM_021733546
- Sequence:
RefSeq Acc Id: XP_021589222   ⟸   XM_021733547
- Sequence:
RefSeq Acc Id: XP_040136334   ⟸   XM_040280400
RefSeq Acc Id: XP_040136333   ⟸   XM_040280399
RefSeq Acc Id: XP_040136332   ⟸   XM_040280398
RefSeq Acc Id: XP_040136331   ⟸   XM_040280397


Additional Information

Database Acc Id Source(s)
NCBI Gene Slc16a7 ENTREZGENE