Dlst (dihydrolipoamide S-succinyltransferase) - Rat Genome Database

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Gene: Dlst (dihydrolipoamide S-succinyltransferase) Ictidomys tridecemlineatus
Analyze
Symbol: Dlst
Name: dihydrolipoamide S-succinyltransferase
RGD ID: 12452131
Description: ENCODES a protein that exhibits dihydrolipoyllysine-residue succinyltransferase activity (ortholog); heat shock protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); NADH metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN oxoglutarate dehydrogenase complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864028,007,904 - 28,030,206 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,038,985 - 4,061,087 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049364884,038,985 - 4,061,071 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
Dlst
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864028,007,904 - 28,030,206 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364884,038,985 - 4,061,087 (+)EnsemblSpeTri2.0
SpeTri2.0NW_0049364884,038,985 - 4,061,071 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DLST
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381474,881,916 - 74,903,743 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1474,881,891 - 74,903,743 (+)EnsemblGRCh38hg38GRCh38
GRCh371475,348,619 - 75,370,446 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361474,418,372 - 74,440,199 (+)NCBINCBI36Build 36hg18NCBI36
Build 341474,418,371 - 74,440,196NCBI
Celera1455,386,967 - 55,408,821 (+)NCBICelera
Cytogenetic Map14q24.3NCBI
HuRef1455,516,596 - 55,538,452 (+)NCBIHuRef
CHM1_11475,287,750 - 75,309,620 (+)NCBICHM1_1
T2T-CHM13v2.01469,091,016 - 69,112,843 (+)NCBIT2T-CHM13v2.0
Dlst
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391285,157,597 - 85,180,865 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1285,157,607 - 85,181,619 (+)EnsemblGRCm39 Ensembl
GRCm381285,110,822 - 85,134,091 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1285,110,833 - 85,134,845 (+)EnsemblGRCm38mm10GRCm38
MGSCv371286,451,783 - 86,475,041 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361285,999,999 - 86,023,189 (+)NCBIMGSCv36mm8
Celera1286,568,081 - 86,591,232 (+)NCBICelera
Cytogenetic Map12D1NCBI
Dlst
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.26104,758,511 - 104,783,296 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl6104,758,631 - 104,783,296 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx6104,927,983 - 104,951,140 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.06105,227,149 - 105,250,302 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.06104,596,515 - 104,619,669 (+)NCBIRnor_WKY
Rnor_6.06108,936,534 - 108,961,322 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6108,936,664 - 108,959,803 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06116,595,654 - 116,620,427 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.46109,156,751 - 109,180,537 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.16109,160,220 - 109,183,992 (+)NCBI
Celera6102,581,378 - 102,605,253 (+)NCBICelera
Cytogenetic Map6q31NCBI
Dlst
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955523661,738 - 680,802 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955523660,413 - 680,878 (-)NCBIChiLan1.0ChiLan1.0
DLST
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan11475,180,451 - 75,205,720 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01455,433,358 - 55,455,876 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11474,278,128 - 74,300,133 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1474,278,128 - 74,300,133 (+)Ensemblpanpan1.1panPan2
DLST
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1848,003,730 - 48,025,001 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl848,002,211 - 48,024,999 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha847,687,937 - 47,709,198 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0848,231,361 - 48,252,635 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl848,230,731 - 48,252,633 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1847,902,283 - 47,923,535 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0847,923,602 - 47,944,852 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0848,321,863 - 48,343,131 (+)NCBIUU_Cfam_GSD_1.0
DLST
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl798,091,124 - 98,111,572 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1798,091,161 - 98,111,267 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.27103,935,074 - 103,955,180 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DLST
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12452,098,270 - 52,121,560 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2452,098,349 - 52,120,121 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605340,330,079 - 40,352,940 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dlst
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473426,803,344 - 26,825,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473426,802,902 - 26,824,632 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSSTOT00000014606   ⟹   ENSSTOP00000013084
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049364884,038,985 - 4,061,087 (+)Ensembl
RefSeq Acc Id: XM_005321240   ⟹   XP_005321297
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864028,007,904 - 28,029,993 (-)NCBI
SpeTri2.0NW_0049364884,038,985 - 4,061,071 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040275791   ⟹   XP_040131725
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440864028,007,904 - 28,030,206 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005321297 (Get FASTA)   NCBI Sequence Viewer  
  XP_040131725 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3260688 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005321297   ⟸   XM_005321240
- Peptide Label: isoform X2
- UniProtKB: I3MN85 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_040131725   ⟸   XM_040275791
- Peptide Label: isoform X1
RefSeq Acc Id: ENSSTOP00000013084   ⟸   ENSSTOT00000014606
Protein Domains
Lipoyl-binding


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000014603 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000013084 ENTREZGENE
  ENSSTOP00000013084.2 UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000014606.3 UniProtKB/TrEMBL
Gene3D-CATH 2.40.50.100 UniProtKB/TrEMBL
  3.30.559.10 UniProtKB/TrEMBL
InterPro 2-oxoA_DH_lipoyl-BS UniProtKB/TrEMBL
  2-oxoacid_DH_actylTfrase UniProtKB/TrEMBL
  Biotin_lipoyl UniProtKB/TrEMBL
  CAT-like_dom_sf UniProtKB/TrEMBL
  Single_hybrid_motif UniProtKB/TrEMBL
  SucB UniProtKB/TrEMBL
NCBI Gene Dlst ENTREZGENE
PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL UniProtKB/TrEMBL
  DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED UniProtKB/TrEMBL
Pfam 2-oxoacid_dh UniProtKB/TrEMBL
  Biotin_lipoyl UniProtKB/TrEMBL
PROSITE BIOTINYL_LIPOYL UniProtKB/TrEMBL
  LIPOYL UniProtKB/TrEMBL
Superfamily-SCOP CoA-dependent acyltransferases UniProtKB/TrEMBL
  SSF51230 UniProtKB/TrEMBL
TIGRFAMs sucB UniProtKB/TrEMBL
UniProt I3MN85 ENTREZGENE, UniProtKB/TrEMBL