Folr2 (folate receptor beta) - Rat Genome Database

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Gene: Folr2 (folate receptor beta) Ictidomys tridecemlineatus
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Symbol: Folr2
Name: folate receptor beta
RGD ID: 12449151
Description: ENCODES a protein that exhibits folic acid binding (ortholog); folic acid receptor activity (ortholog); methotrexate binding (ortholog); INVOLVED IN folic acid transport (ortholog); monocyte chemotaxis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); intellectual disability (ortholog); neural tube defect (ortholog); FOUND IN anchored component of external side of plasma membrane (ortholog); cell surface (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: folate receptor beta, transcript variant X1; folate receptor beta, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494759,917,164 - 59,922,642 (+)NCBI
SpeTri2.0NW_0049364981,516,719 - 1,522,187 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
Folr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494759,917,164 - 59,922,642 (+)NCBI
SpeTri2.0NW_0049364981,516,719 - 1,522,187 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FOLR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1172,216,601 - 72,221,950 (+)EnsemblGRCh38hg38GRCh38
GRCh381172,216,794 - 72,221,950 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371171,927,838 - 71,932,994 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361171,605,488 - 71,610,637 (+)NCBINCBI36hg18NCBI36
Build 341171,605,490 - 71,610,635NCBI
Celera1169,229,223 - 69,234,398 (+)NCBI
Cytogenetic Map11q13.4NCBI
HuRef1168,220,979 - 68,226,155 (+)NCBIHuRef
CHM1_11171,811,270 - 71,816,445 (+)NCBICHM1_1
Folr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397101,489,195 - 101,506,397 (-)NCBIGRCm39mm39
GRCm39 Ensembl7101,489,195 - 101,506,401 (-)Ensembl
GRCm387101,839,988 - 101,857,190 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7101,839,988 - 101,857,194 (-)EnsemblGRCm38mm10GRCm38
MGSCv377108,988,502 - 109,005,704 (-)NCBIGRCm37mm9NCBIm37
MGSCv367101,713,809 - 101,731,011 (-)NCBImm8
Celera7102,211,727 - 102,229,006 (-)NCBICelera
Cytogenetic Map7E2NCBI
Folr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21156,200,044 - 156,218,380 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1156,200,060 - 156,205,724 (-)Ensembl
Rnor_6.01166,915,045 - 166,933,377 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1166,915,045 - 166,919,302 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01173,104,830 - 173,123,162 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41159,295,773 - 159,314,107 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11159,374,969 - 159,379,040 (-)NCBI
Celera1154,279,465 - 154,297,790 (-)NCBICelera
Cytogenetic Map1q32NCBI
FOLR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11170,518,931 - 70,524,088 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1170,518,931 - 70,524,088 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01167,295,305 - 67,300,463 (+)NCBIMhudiblu_PPA_v0panPan3
LOC476816
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12125,917,476 - 25,923,267 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2125,687,133 - 25,692,920 (-)NCBI
ROS_Cfam_1.02126,126,072 - 26,131,869 (-)NCBI
UMICH_Zoey_3.12125,917,551 - 25,923,336 (-)NCBI
UNSW_CanFamBas_1.02126,133,737 - 26,139,526 (-)NCBI
UU_Cfam_GSD_1.02126,035,288 - 26,041,078 (-)NCBI
FOLR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl96,785,303 - 6,790,465 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.196,785,308 - 6,790,466 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.297,546,813 - 7,551,961 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FOLR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1163,436,430 - 63,441,924 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl163,436,684 - 63,441,743 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604362,442,495 - 62,447,826 (-)NCBIVero_WHO_p1.0
LOC101721569
(Heterocephalus glaber - naked mole-rat)
No map positions available.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_005323156   ⟹   XP_005323213
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494759,917,164 - 59,922,642 (+)NCBI
SpeTri2.0NW_0049364981,516,719 - 1,522,187 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021725058   ⟹   XP_021580733
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049364981,517,660 - 1,522,187 (+)NCBI
Sequence:
RefSeq Acc Id: XM_040284897   ⟹   XP_040140831
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494759,917,167 - 59,922,642 (+)NCBI
RefSeq Acc Id: XM_040284898   ⟹   XP_040140832
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440494759,917,164 - 59,922,642 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005323213 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140831 (Get FASTA)   NCBI Sequence Viewer  
  XP_040140832 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3286074 (Get FASTA)   NCBI Sequence Viewer  
  KAG3286075 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_005323213   ⟸   XM_005323156
- UniProtKB: I3M4T2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021580733   ⟸   XM_021725058
- Sequence:
RefSeq Acc Id: XP_040140832   ⟸   XM_040284898
RefSeq Acc Id: XP_040140831   ⟸   XM_040284897


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000004760 ENTREZGENE
Ensembl Protein ENSSTOP00000004258 ENTREZGENE
NCBI Gene Folr2 ENTREZGENE
UniProt I3M4T2 ENTREZGENE