Dck (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024405285 | 15,366,311 - 15,391,122 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936598 | 3,817,994 - 3,843,241 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936598 | 3,819,239 - 3,846,692 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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DCK (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 4 | 70,993,649 - 71,030,914 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 4 | 70,992,538 - 71,030,914 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 4 | 71,859,366 - 71,896,631 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 4 | 72,078,256 - 72,115,477 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 4 | 72,224,426 - 72,261,648 | NCBI | | | | | Celera | 4 | 69,216,290 - 69,253,648 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | q13.3 | NCBI | | | | | HuRef | 4 | 67,664,417 - 67,701,817 (+) | NCBI | | HuRef | | | CHM1_1 | 4 | 71,895,140 - 71,932,501 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 4 | 74,336,086 - 74,373,339 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Dck (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 5 | 88,912,872 - 88,931,136 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 5 | 88,912,855 - 88,931,140 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 5 | 88,765,013 - 88,783,277 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 5 | 88,764,996 - 88,783,281 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 5 | 89,194,038 - 89,212,302 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 5 | 89,839,588 - 89,857,838 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 5 | 86,914,328 - 86,932,500 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | E1 | NCBI | | | | | cM Map | 5 | 43.96 | NCBI | | | | |
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Dck (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 14 | 19,589,298 - 19,610,326 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 14 | 19,305,218 - 19,326,247 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 14 | 19,305,218 - 19,326,247 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 14 | 19,294,940 - 19,315,959 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 14 | 20,613,805 - 20,634,822 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 14 | 19,316,197 - 19,337,208 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 14 | 20,935,442 - 20,952,939 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 20,935,369 - 20,953,095 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 14 | 20,845,716 - 20,863,008 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 20,886,700 - 20,904,305 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 20,886,695 - 20,904,305 (-) | NCBI | | | | | Celera | 14 | 18,648,191 - 18,665,287 (-) | NCBI | | Celera | | | Cytogenetic Map | 14 | p22 | NCBI | | | | |
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Dck (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955447 | 2,031,258 - 2,067,210 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955447 | 2,031,851 - 2,067,005 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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DCK (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 3 | 59,054,071 - 59,094,834 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 4 | 59,249,120 - 59,286,370 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 4 | 53,193,475 - 53,230,708 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 4 | 59,537,350 - 59,574,537 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 4 | 59,536,997 - 59,574,537 (-) | Ensembl | panpan1.1 | | panPan2 | |
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DCK (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 13 | 60,206,742 - 60,236,338 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 13 | 60,205,937 - 60,235,678 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 13 | 59,940,643 - 59,971,419 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 13 | 61,012,272 - 61,043,696 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 13 | 61,011,720 - 61,076,885 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 13 | 60,627,511 - 60,658,525 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 13 | 60,119,020 - 60,150,439 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 13 | 61,266,521 - 61,297,680 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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DCK (Sus scrofa - pig) |
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DCK (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 7 | 19,503,855 - 19,535,355 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 7 | 19,504,038 - 19,535,674 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666084 | 3,326,990 - 3,358,445 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Dck (Heterocephalus glaber - naked mole-rat) |
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