| Gene: Pla2g3 (phospholipase A2 group III) Ictidomys tridecemlineatus |
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Analyze |
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| Symbol: |
Pla2g3 |
| Name: |
phospholipase A2 group III |
| Description: |
PARTICIPATES IN arachidonic acid metabolic pathway; glutamate signaling pathway; glycerophospholipid metabolic pathway |
| Type: |
protein-coding
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| RefSeq Status: |
MODEL |
| Also known as: |
group 3 secretory phospholipase A2 |
| Orthologs: |
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| Latest Assembly: |
SpeTri2.0 - Squirrel SpeTri2.0 Assembly |
| Position: |
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| JBrowse: |
View Region in Genome Browser (JBrowse)
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| Model |
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 Molecular Pathway Annotations |
Molecular Pathway Annotations
Genomics
Comparative Map Data
Pla2g3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PLA2G3
(Homo sapiens - human) |
| Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 Ensembl | 22 | 31,134,807 - 31,140,508 (-) | Ensembl | | | | | GRCh38 | 22 | 31,134,807 - 31,140,508 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh37 | 22 | 31,530,793 - 31,536,469 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 22 | 29,860,793 - 29,866,469 (-) | NCBI | NCBI36 | | hg18 | NCBI36 | Build 34 | 22 | 29,855,346 - 29,861,023 | NCBI | | | | | Celera | 22 | 15,330,868 - 15,336,544 (-) | NCBI | | | | | Cytogenetic Map | 22 | q12.2 | NCBI | | | | | HuRef | 22 | 14,492,451 - 14,498,127 (-) | NCBI | | HuRef | | | CHM1_1 | 22 | 31,490,658 - 31,496,458 (-) | NCBI | | CHM1_1 | | |
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Pla2g3
(Mus musculus - house mouse) |
| Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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GRCm38 Ensembl | 11 | 3,488,284 - 3,499,350 (+) | Ensembl | | | | | GRCm38 | 11 | 3,488,158 - 3,499,346 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | MGSCv37 | 11 | 3,388,230 - 3,394,169 (+) | NCBI | GRCm37 | | mm9 | NCBIm37 | MGSCv36 | 11 | 3,388,302 - 3,399,353 (+) | NCBI | | | mm8 | | Celera | 11 | 3,979,003 - 3,985,078 (+) | NCBI | | Celera | | | Cytogenetic Map | 11 | A1 | NCBI | | | | |
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Pla2g3
(Rattus norvegicus - Norway rat) |
| Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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Rnor_6.0 | 14 | 83,724,828 - 83,730,614 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 14 | 83,724,933 - 83,730,614 (+) | Ensembl | | | | | Rnor_5.0 | 14 | 84,412,999 - 84,418,680 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 14 | 84,119,872 - 84,125,552 (+) | NCBI | RGSC3.4 | | rn4 | RGSC3.4 | RGSC_v3.1 | 14 | 84,130,645 - 84,143,800 (+) | NCBI | | | | | Celera | 14 | 77,281,569 - 77,287,249 (+) | NCBI | | Celera | | | Cytogenetic Map | 14 | q21 | NCBI | | | | |
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Pla2g3
(Chinchilla lanigera - long-tailed chinchilla) |
| Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 | NW_004955455 | 5,314,520 - 5,320,151 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PLA2G3
(Pan paniscus - bonobo/pygmy chimpanzee) |
| Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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| JBrowse | NCBI | UCSC | Ensembl |
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PanPan1.1 | 22 | 29,995,364 - 30,001,160 (-) | NCBI | panpan1.1 | PanPan1.1 | | | Bonobo Cytomap | 22 | | NCBI | | | | |
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PLA2G3
(Canis lupus familiaris - dog) |
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PLA2G3
(Sus scrofa - pig) |
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Expression
Sequence
Nucleotide Sequences
Reference Sequences
| RefSeq Acc Id: |
XM_005339855 ⟹ XP_005339912 |
| RefSeq Status: |
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| Type: |
CODING
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| Position: |
| Squirrel Assembly | Chr | Position (strand) | Source |
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SpeTri2.0 | NW_004936755 | 307,166 - 312,683 (-) | NCBI | |
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| Sequence: |
ATGGGGGTTCTGGCAGTGCTGCTAGGGGTGCTTGGCTTTCTGGGGTTGACTCCAGGGGGCTCCC
AAGCCCTCCACTGGGATAGCACTTCTTGCCACTTGGCCAGATCCATCCCTGGCAGCCCTCTTGG
GTCCTTGAGCTTCCTGGGCAAGGATACCCAGGGACTGGCACTGTTCCACGCCCGCTGGGATGCA
CACAGAAAGCTGCAGGTATGTAGCAGGCTGGATGAACCAGAGCTCACGGCAACCTTCGGTGCTC
TCTGTGTTCATGAGATCACCCAGGGCTTCTTCATTCACACCCCCGGACCTGAGCTTCAGAGAAC
ACTGGCCATGCTTCAGAGTCAGTGGGAAACCTGCCGAGGACCTGAGGAAGGTCCAGCAAGGGCC
AGGGAGAAGAGAATGGCAGGGCAAAGTGAAGCACCTGGCAGAGGGCATCTGCGAACAAAGAGAG
GCTGGACCATGCCTGGCACATTGTGGTGTGGAGTTGGAGACTCTGCTGGGAACTCCTCGGAGTT
GGGGATCTTCCAGGGCCCTGATCTCTGCTGCCGGGAACATGACCGCTGCCCAAAGAACATCTCG
CCCTTGCAGTATAACTATGGCATCCGAAACTTCAGATTCCATACCATCTCCCACTGTGACTGTG
ATACCAGGTTCCAGCAATGCCTGAGGAACCAGCATGACTCCATCTCGGACATTGTGGGTGTAGC
CTTCTTCAACGTACTGGAGATCCCCTGCTTTGTGCTGAAGGAGAAGGAGGCGTGTGTGGTGTGG
TACTGGTGGGGAGGGTGTAGGACGTATGGCTCGGTGCTCCTCGCCCATCTCCAGCCCCCTACCT
ACTACAATGCCTCCTGGAGATCCCCCATCACCTCCCTGACTCCAAGTCCCCAAAGCCTAGCCCC
CACCAAATTGCAACAAAAGCAGCACCCTCAGAAGAGGCAGCCACAGCTAAAAAACTCCAGGTAC
CCCAGTCTGGCCAATACCACAGTCTTCCAGGCCACATCCTCCAGGACTGATGTAACCCCCACAG
CTGAGACATGGGCTCCCCATCCAGTTCTCCAGCACCTAAAACCTCGGGGTGCCCACAGGGCCTG
CCGTAGCTTCCGCCGCCTGGACCAGTGTGAGCACCAAATTAAGCCCCAGGAAACCAAGTTCCAG
CTGCTCAACAGTGCCCGTGGGCCCCTTTTCCACTGCAACTGCACACAACGTCTGGCACGCTTCC
TGAGGCTCCATAGCCCACCTGCAGGTGCCAACATGCTCTGGGAGTTGCTGGGCACCACCTGCTT
CAAACTGGTCCCTTCACTGGACTGTGCTGAGGACAAAGGCTGTTCCAAAGACCCAAGGGCCATC
AAGGTGTCAGCACGGCACTTGCGGCGACTTCAGAAGATACGATTCCAACTCAGGGATAAACACA
CAGAGGAAGGGCAGGCATGGCCATTGGAGTCCGCAGGGACTCCTGTGTCATTCTACAACCAGTG
CCTGCAGCTAACCCAGGCAACCTGGAGACTTAATGGGCAGCAGAAATTCTGGAGCTAGTGACCT
CAGTTCCAGTTCTCTTGAGCATCAGCTTGGACCTTATCCCTAGCTTGACCAAGCACTGGGAATC
TTGGCCTCTTCTCCGTGGGTTAGACTGCAGCATGGCAGAAGCTCTTATGGAAAGCCGGGAGGCT
AGAGGTGGGGGACCTTAAAGCTCAAATACCAGAGCATGTCTCCTGCAGTGCTGGGTGACCTTAA
GCTGGTGACAAAAACCCTCTGTGAAGTTTTGTGAACGTGGTATTCAGGAGGCTCACTCTAATGC
CCTGGGCTTAGGGTCTTATACAGGAAACTTCATATTTGAATGGAAATGGGGAGAGTAACTTATT
GCAGCAGCCCCAGGAGGTCCCAGAAGGAGGTATATGTGTATTCATGTTGCAAAATTAATACATG
TCTCAATAACCTGCCTAGGAAAGCCCTAGCACCTTATCATGAAGCCCAGGGCAGCTGGTAGGAA
GCTAGGAATGTCACAGAAGTACCTGCATCTGAATCCAGGATGGGGGCACTGGAGAGGGCTTCCC
AACTCCTCTCTTTCTAGGGGGCTCCTTCTTTTAATAGCTGATACAACCTTCCTAGCCTAGGCCT
GGACCATTCTTTCTGCCCTAAACCTAATTCAAATCTGTTCTGTGCACTGGGGCAAAGGACCTCC
CTCCCCTGTTCTAAGCCTTGATTTCCTCCTCTGAAAAGGGTGTGTGTGTATACCAGAGCTACCT
CATAGTCTTTTGGGGATCAAGTGAACTAATATATACATACTTATAGCACTTAGCACCTAGTAAA
TATTCCTTCTCTAACACAGCCAAACTGCTTTGGTGTAAAATCCTGAGAAACTGATGTAACCTCT
TGGAGACCTCAATTTGCTCTCCCATGCCTGAGTCTAAGAATGGCACTGAACCCATTTGGTTGTG
GTTAAAGGAGATGGCATGAATCCCATATATAGTACCTGGTAAATGTCAATTCTGTCATTCTCTT
ACCTCTTTATT
hide sequence
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Protein Sequences
Reference Sequences
| RefSeq Acc Id: |
XP_005339912 ⟸ XM_005339855 |
| - Sequence: |
MGVLAVLLGVLGFLGLTPGGSQALHWDSTSCHLARSIPGSPLGSLSFLGKDTQGLALFHARWDA
HRKLQVCSRLDEPELTATFGALCVHEITQGFFIHTPGPELQRTLAMLQSQWETCRGPEEGPARA
REKRMAGQSEAPGRGHLRTKRGWTMPGTLWCGVGDSAGNSSELGIFQGPDLCCREHDRCPKNIS
PLQYNYGIRNFRFHTISHCDCDTRFQQCLRNQHDSISDIVGVAFFNVLEIPCFVLKEKEACVVW
YWWGGCRTYGSVLLAHLQPPTYYNASWRSPITSLTPSPQSLAPTKLQQKQHPQKRQPQLKNSRY
PSLANTTVFQATSSRTDVTPTAETWAPHPVLQHLKPRGAHRACRSFRRLDQCEHQIKPQETKFQ
LLNSARGPLFHCNCTQRLARFLRLHSPPAGANMLWELLGTTCFKLVPSLDCAEDKGCSKDPRAI
KVSARHLRRLQKIRFQLRDKHTEEGQAWPLESAGTPVSFYNQCLQLTQATWRLNGQQKFWS
hide sequence
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Protein Domains
PA2c
Additional Information
External Database Links |
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| RGD Object Information |
| RGD ID: |
12448089 |
| Created: |
2017-01-27 |
| Species: |
Ictidomys tridecemlineatus |
| Last Modified: |
2019-11-27 |
| Status: |
ACTIVE |
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