Ctdspl2 (CTD small phosphatase like 2)

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Gene: Ctdspl2 (CTD small phosphatase like 2) Ictidomys tridecemlineatus

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Symbol:

Ctdspl2

Name:

CTD small phosphatase like 2

RGD ID:

12447724

Description:

ENCODES a protein that exhibits phosphatase activity (inferred); phosphoprotein phosphatase activity (inferred); RNA polymerase II CTD heptapeptide repeat phosphatase activity (inferred); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of protein export from nucleus (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CTD small phosphatase like 2, transcript variant X1; CTD small phosphatase like 2, transcript variant X2; CTD small phosphatase like 2, transcript variant X3; CTD small phosphatase-like protein 2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	89,577,496 - 89,657,911 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	7,425,590 - 7,503,980 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	7,425,543 - 7,502,299 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Bloom syndrome (ISO)

colorectal cancer (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of BMP signaling pathway (IEA,ISO)

positive regulation of protein export from nucleus (IEA,ISO)

protein dephosphorylation (ISO)

protein export from nucleus (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

nucleoplasm (IEA)

nucleus (IEA)

Molecular Function

phosphatase activity (IEA)

phosphoprotein phosphatase activity (IEA)

protein binding (ISO)

RNA polymerase II CTD heptapeptide repeat phosphatase activity (IEA)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Ctdspl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	89,577,496 - 89,657,911 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	7,425,590 - 7,503,980 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	7,425,543 - 7,502,299 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CTDSPL2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	44,427,629 - 44,529,038 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	44,427,622 - 44,529,038 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	44,719,827 - 44,821,236 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	42,506,871 - 42,606,722 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	21,609,344 - 21,709,186 (+)	NCBI		Celera
Cytogenetic Map	15	q15.3-q21.1	NCBI
HuRef	15	21,542,511 - 21,642,657 (+)	NCBI		HuRef
CHM1_1	15	44,837,772 - 44,937,540 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	15	42,234,989 - 42,336,704 (+)	NCBI		T2T-CHM13v2.0

Ctdspl2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	121,785,879 - 121,845,807 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	121,786,482 - 121,844,123 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	121,955,398 - 122,015,326 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	121,956,001 - 122,013,642 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	121,782,189 - 121,839,322 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	121,647,894 - 121,705,027 (+)	NCBI		MGSCv36	mm8
Celera	2	123,105,063 - 123,161,640 (+)	NCBI		Celera
Cytogenetic Map	2	E5	NCBI
cM Map	2	60.46	NCBI

Ctdspl2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	129,365,709 - 129,424,232 (+)	NCBI		GRCr8
mRatBN7.2	3	108,915,263 - 108,970,620 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	108,915,280 - 108,967,227 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	112,589,499 - 112,641,835 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	121,185,039 - 121,237,372 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	118,845,411 - 118,897,746 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	113,906,803 - 113,957,289 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	113,918,629 - 113,960,101 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	120,445,979 - 120,498,692 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	108,742,714 - 108,796,435 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	108,648,286 - 108,702,007 (+)	NCBI
Celera	3	107,814,236 - 107,864,724 (+)	NCBI		Celera
Cytogenetic Map	3	q35	NCBI

Ctdspl2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955416	10,970,492 - 11,046,179 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955416	10,970,487 - 11,046,179 (+)	NCBI	ChiLan1.0	ChiLan1.0

CTDSPL2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	33,674,389 - 33,774,598 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	37,837,417 - 37,940,172 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	23,384,416 - 23,483,508 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	41,554,276 - 41,654,736 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	41,554,276 - 41,654,736 (+)	Ensembl	panpan1.1		panPan2

CTDSPL2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	11,109,571 - 11,194,985 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	11,109,664 - 11,193,534 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	11,166,102 - 11,254,634 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	11,245,681 - 11,334,277 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	11,245,772 - 11,334,259 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	11,152,895 - 11,241,371 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	11,276,652 - 11,363,904 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	11,395,449 - 11,483,617 (+)	NCBI		UU_Cfam_GSD_1.0

CTDSPL2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	127,028,887 - 127,125,392 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	127,029,445 - 127,125,747 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	141,621,919 - 141,627,665 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CTDSPL2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	38,516,044 - 38,626,963 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	38,519,094 - 38,627,099 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	102,416,240 - 102,525,619 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ctdspl2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624804	11,703,529 - 11,781,542 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005316506	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013359876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021726456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040274927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000002215 ⟹ ENSSTOP00000001975

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	7,452,687 - 7,500,852 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039436 ⟹ ENSSTOP00000024235

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	7,425,590 - 7,503,980 (+)	Ensembl

RefSeq Acc Id:

XM_005316506 ⟹ XP_005316563

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	89,577,496 - 89,654,796 (+)	NCBI
SpeTri2.0	NW_004936471	7,425,544 - 7,502,299 (+)	NCBI

Sequence:

show sequence

CGGGGAGGCCGCTTTTCATCCGGGTCCCTGTCCGTGCGGTGCAGCAGGTCGGTAGGCGGGAAAT
GGCGACTGGCTGAAGGAGCTGGTTCTGTTCCTGCTGTGGGCTAAGCGCGAAAGACACCCCACAC
TGCGCATTCGGGACCATCGCCGGAGCCTGAGGACACTTCTCTGTCGTCACAGTTAGTTTTACAT
GTGGCACCCATAAAAGATGAGGCTGAGAACACGGAAAGCTTCTCAGCAGTCAAATCAAATCCAA
ACACAACGCACTGCCAGAGCAAAAAGGAAATATTCAGAGGTTGATGATGGGCTGCCATCAGGAG
GAGAAAAACCACCGAAGAATGAAACCGGCCTATTGTCTTCTATTAAAAAATTCATTAAAGGAAG
CACACCCAAGGAAGAGAGAGAAAATCCTTCAAAGCGGAGTAGAATTGAACGTGATATAGATAAT
AATTTGATCACATCATCACCAAGAACAGGAGAAAAGCCTAACAAACAGATATCTCGAGTAAGAC
GGAAAAGTCAAGTAAATGGAGAAGCTGGTAGTTATGAAATGACAAATCAACATGCAAAACAAAA
TGGGAAATTAGAAGAACATCCTTCCTCTGGCAGTCCTCCAAGGACTACATTGTTGGGGACCATA
TTTTCTCCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACGTCAGGATCAGATTCCC
CAGGACAGGCTGTGGAAGCTGAAGAGATAGTAAAACAACTTGACATGGAACAGGTGGATGAGAT
CACTACCAGTACTACAACATCAACAAATGGAGCAGCTTACTCAAATCAAGCAGTACAAGTGAGG
CCATCGATAAATAATGGTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTA
CAGCACCAGTAACTCCAGAGAGTGGTTATTCATCAGCCCATGCAGAAGCCACCTATGAAGAAGA
CTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTTCCACCACTGACAGAAGAACAACTA
AATAGGAAACCTGCTCTTCCATTGAAAACAAGAAGCACACCAGAATTCTCCTTAGTTTTAGACC
TGGATGAAACACTAGTGCATTGTAGCCTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGT
CCTTTTCCAAGATGTCATTTATCAGGTTTATGTGAGATTAAGACCATTCTTCAGGGAATTCCTG
GAACGAATGTCTCAGATGTATGAGATCATTCTTTTTACTGCTTCTAAGAAGGTGTATGCAGACA
AGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGAACATTG
TGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATCCTTGGAAGGGATCTTTCAAAAACT
ATAATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTTTCTAATGGAATCCCTATAGAAA
GTTGGTTTATGGATAAAAATGACAATGAACTCCTAAAATTGATTCCATTTCTGGAGAAGCTTGT
AGAACTGAATGAAGATGTCCGACCTCACATCAGAGACAGATTTCGCTTGCATGATTTGCTGCCC
CCAGATTAAGTACAAAGACTTGTCAAATCACTGAAGGGGGAGAGAATGCAGGACCCTTTTGGAC
TGAAACAAAAACATTGCCATTACTGTTGAAATTTTGCATTTTTGTACCCCGTCTTGCTTTTCTT
ATCTTTGGTGCCCAATAATAATCAAGGGTTACAGAAAGAGACTATCTCAGATTGAATACATACA
GTAGGTAGGCTAAAACAGAAGAGTCTTTAAAACTAGTGCAACTCCAGTGAAATTTTTTTATGTA
CAGGACATCTGCAGTTTATAAAGAATTCTGTTTCTGCCACCAGCAGTTTGACCTGTAGTTACAC
AGGATTTTATGATAATAACAGAGATGAAAATGGACTTTTATTTTCTCTCTGTTTGGTGCTCTAA
GTGGGTTTGTAGCCACTTTTCTGTTACTTTATGATTCTCATTTCAACAGGAATGGCCAGTAAAA
GTTGTTTTATTTTTTCCTGTTAAGGTTTATAACCTTTTTACATTTTTGACCTGTATTAGATTAG
AATTTCATTATGCATTCCTTTTAGTTGAGGCGCTTCATAGTTTTCTGGAAATAGTCAGTTTTTA
GTTTTTTATTATACATTTGAATGGCCGTTTTCCTGCTTTGTATGCCTGCATATTGTATATTTGT
TTAAAAATATTCTCTACTTTTAGTCCATGTAAGTTTCATTTAAAAAGACATGCATTTATATTTT
GTTTCTGTAATATTCTACTGTAGGTGAAATCTTTTTAAAAATCAAGAGACTGGGTAGATAAGAA
TATATATGATGACTAATATTCAAAAGATTTAAACCATTGTGATGGCGTGTATTCCCAAATGGTA
ATATCTTGCAACGGCACACAGATTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACC
AATCTTTGAGGAGAAAAGTTTAGTCACCTGTTGGGCTTGATTTAGTTACTGCTGCCTTTTGGTT
TTCTCCAGGAATGAAGTATGCAGCACAGTGACTCAGTATTTTTAGTTACTTTGCATGGGCTGGT
AGTACCTCTGTTATGCTCTCAGTTACAATCAGTTTAAAACTCTGTGTAACAGTCTTGGTACCTA
ACAGTAGCTATGCATAATCCTGTGGCACAGTACACTCCCAAGCCACCAATGCAGTTAATAGGCT
CTCATAGTGGTTTTCTATGCTATATGAAAATAGTCTTCAAGCCTTGGTTCTCTAATGCAGCTAC
CACAAGAGGTTGATATTTTTATAGTGGTGTGTAATCTCCTTTTCGGGAGGCTTTTTATGGAAGG
TAGAATTTGTAAAAGTTAGTATGCTTTGCCTCTCAACTGCATTAACATGCCACAGGCTTAGACT
GTTTTTGTGTAAAGGATGTCAAAGAACGGCACTTTTTCTAAAGAGAAGTTTGATATTTTGTATG
CTTGTTAAGAAAGTACAGTATTGGAAATTAAAGGTGGACAACTGATAA

hide sequence

RefSeq Acc Id:

XM_013359876 ⟹ XP_013215330

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	89,577,536 - 89,654,796 (+)	NCBI
SpeTri2.0	NW_004936471	7,425,543 - 7,502,297 (+)	NCBI

Sequence:

show sequence

GCGGGGAGGCCGCTTTTCATCCGGGTCCCTGTCCGTGCGGTGCAGCAGGTCGGTAGGCGGGAAA
TGGCGACTGGCTGAAGGAGCTGGTTCTGTTCCTGCTGTGGGCTAAGCGCGAAAGACACCCCACA
CTGCGCATTCGGGACCATCGCCGGAGCCTGAGGACACTTCTCTGTCGTCACAGTTAGTTTTACA
TGTGGCACCCATAAAAGATGAGGCTGAGAACACGGAAAGCTTCTCAGCAGTCAAATCAAATCCA
AACACAACGCACTGCCAGAGCAAAAAGGAAATATTCAGAGGTTGATGATGGGCTGCCATCAGGA
GGAGAAAAACCACCGAAGAATGAAACCGGCCTATTGTCTTCTATTAAAAAATTCATTAAAGGAA
GCACACCCAAGGAAGAGAGAGAAAATCCTTCAAAGCGGAGTAGAATTGAACGTGATATAGATAA
TAATTTGATCACATCATCACCAAGAACAGGAGAAAAGCCTAACAAACAGATATCTCGAGTAAGA
CGGAAAAGTCAAGTAAATGGAGCTGGTAGTTATGAAATGACAAATCAACATGCAAAACAAAATG
GGAAATTAGAAGAACATCCTTCCTCTGGCAGTCCTCCAAGGACTACATTGTTGGGGACCATATT
TTCTCCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACGTCAGGATCAGATTCCCCA
GGACAGGCTGTGGAAGCTGAAGAGATAGTAAAACAACTTGACATGGAACAGGTGGATGAGATCA
CTACCAGTACTACAACATCAACAAATGGAGCAGCTTACTCAAATCAAGCAGTACAAGTGAGGCC
ATCGATAAATAATGGTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTACA
GCACCAGTAACTCCAGAGAGTGGTTATTCATCAGCCCATGCAGAAGCCACCTATGAAGAAGACT
GGGAAGTATTTGACCCCTATTATTTCATCAAACATGTTCCACCACTGACAGAAGAACAACTAAA
TAGGAAACCTGCTCTTCCATTGAAAACAAGAAGCACACCAGAATTCTCCTTAGTTTTAGACCTG
GATGAAACACTAGTGCATTGTAGCCTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGTCC
TTTTCCAAGATGTCATTTATCAGGTTTATGTGAGATTAAGACCATTCTTCAGGGAATTCCTGGA
ACGAATGTCTCAGATGTATGAGATCATTCTTTTTACTGCTTCTAAGAAGGTGTATGCAGACAAG
TTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGAACATTGTG
TTTGTGTACAAGGAAACTATATAAAGGACTTAAATATCCTTGGAAGGGATCTTTCAAAAACTAT
AATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTTTCTAATGGAATCCCTATAGAAAGT
TGGTTTATGGATAAAAATGACAATGAACTCCTAAAATTGATTCCATTTCTGGAGAAGCTTGTAG
AACTGAATGAAGATGTCCGACCTCACATCAGAGACAGATTTCGCTTGCATGATTTGCTGCCCCC
AGATTAAGTACAAAGACTTGTCAAATCACTGAAGGGGGAGAGAATGCAGGACCCTTTTGGACTG
AAACAAAAACATTGCCATTACTGTTGAAATTTTGCATTTTTGTACCCCGTCTTGCTTTTCTTAT
CTTTGGTGCCCAATAATAATCAAGGGTTACAGAAAGAGACTATCTCAGATTGAATACATACAGT
AGGTAGGCTAAAACAGAAGAGTCTTTAAAACTAGTGCAACTCCAGTGAAATTTTTTTATGTACA
GGACATCTGCAGTTTATAAAGAATTCTGTTTCTGCCACCAGCAGTTTGACCTGTAGTTACACAG
GATTTTATGATAATAACAGAGATGAAAATGGACTTTTATTTTCTCTCTGTTTGGTGCTCTAAGT
GGGTTTGTAGCCACTTTTCTGTTACTTTATGATTCTCATTTCAACAGGAATGGCCAGTAAAAGT
TGTTTTATTTTTTCCTGTTAAGGTTTATAACCTTTTTACATTTTTGACCTGTATTAGATTAGAA
TTTCATTATGCATTCCTTTTAGTTGAGGCGCTTCATAGTTTTCTGGAAATAGTCAGTTTTTAGT
TTTTTATTATACATTTGAATGGCCGTTTTCCTGCTTTGTATGCCTGCATATTGTATATTTGTTT
AAAAATATTCTCTACTTTTAGTCCATGTAAGTTTCATTTAAAAAGACATGCATTTATATTTTGT
TTCTGTAATATTCTACTGTAGGTGAAATCTTTTTAAAAATCAAGAGACTGGGTAGATAAGAATA
TATATGATGACTAATATTCAAAAGATTTAAACCATTGTGATGGCGTGTATTCCCAAATGGTAAT
ATCTTGCAACGGCACACAGATTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACCAA
TCTTTGAGGAGAAAAGTTTAGTCACCTGTTGGGCTTGATTTAGTTACTGCTGCCTTTTGGTTTT
CTCCAGGAATGAAGTATGCAGCACAGTGACTCAGTATTTTTAGTTACTTTGCATGGGCTGGTAG
TACCTCTGTTATGCTCTCAGTTACAATCAGTTTAAAACTCTGTGTAACAGTCTTGGTACCTAAC
AGTAGCTATGCATAATCCTGTGGCACAGTACACTCCCAAGCCACCAATGCAGTTAATAGGCTCT
CATAGTGGTTTTCTATGCTATATGAAAATAGTCTTCAAGCCTTGGTTCTCTAATGCAGCTACCA
CAAGAGGTTGATATTTTTATAGTGGTGTGTAATCTCCTTTTCGGGAGGCTTTTTATGGAAGGTA
GAATTTGTAAAAGTTAGTATGCTTTGCCTCTCAACTGCATTAACATGCCACAGGCTTAGACTGT
TTTTGTGTAAAGGATGTCAAAGAACGGCACTTTTTCTAAAGAGAAGTTTGATATTTTGTATGCT
TGTTAAGAAAGTACAGTATTGGAAATTAAAGGTGGACAACTGAT

hide sequence

RefSeq Acc Id:

XM_040274925 ⟹ XP_040130859

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	89,577,678 - 89,657,911 (+)	NCBI

RefSeq Acc Id:

XM_040274927 ⟹ XP_040130861

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	89,604,672 - 89,657,911 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005316563	(Get FASTA)	NCBI Sequence Viewer
	XP_013215330	(Get FASTA)	NCBI Sequence Viewer
	XP_040130859	(Get FASTA)	NCBI Sequence Viewer
	XP_040130861	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000001975.3
	ENSSTOP00000024235.1
GenBank Protein	KAG3261785	(Get FASTA)	NCBI Sequence Viewer
	KAG3261786	(Get FASTA)	NCBI Sequence Viewer
	KAG3261787	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005316563 ⟸ XM_005316506
- Peptide Label:	isoform X1
- UniProtKB:	I3LZZ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRTRKASQQSNQIQTQRTARAKRKYSEVDDGLPSGGEKPPKNETGLLSSIKKFIKGSTPKEE RENPSKRSRIERDIDNNLITSSPRTGEKPNKQISRVRRKSQVNGEAGSYEMTNQHAKQNGKLEE HPSSGSPPRTTLLGTIFSPVFNFFSPANKNGTSGSDSPGQAVEAEEIVKQLDMEQVDEITTSTT TSTNGAAYSNQAVQVRPSINNGLEEAEETVNRDIPPLTAPVTPESGYSSAHAEATYEEDWEVFD PYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDV IYQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQG NYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELNED VRPHIRDRFRLHDLLPPD hide sequence

RefSeq Acc Id:	XP_013215330 ⟸ XM_013359876
- Peptide Label:	isoform X2
- UniProtKB:	A0A287CSD3 (UniProtKB/TrEMBL), I3LZZ4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRLRTRKASQQSNQIQTQRTARAKRKYSEVDDGLPSGGEKPPKNETGLLSSIKKFIKGSTPKEE RENPSKRSRIERDIDNNLITSSPRTGEKPNKQISRVRRKSQVNGAGSYEMTNQHAKQNGKLEEH PSSGSPPRTTLLGTIFSPVFNFFSPANKNGTSGSDSPGQAVEAEEIVKQLDMEQVDEITTSTTT STNGAAYSNQAVQVRPSINNGLEEAEETVNRDIPPLTAPVTPESGYSSAHAEATYEEDWEVFDP YYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVI YQVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCVQGN YIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKLVELNEDV RPHIRDRFRLHDLLPPD hide sequence

RefSeq Acc Id:	XP_040130859 ⟸ XM_040274925
- Peptide Label:	isoform X1
- UniProtKB:	I3LZZ4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040130861 ⟸ XM_040274927
- Peptide Label:	isoform X3

Ensembl Acc Id:

ENSSTOP00000024235 ⟸ ENSSTOT00000039436

Ensembl Acc Id:

ENSSTOP00000001975 ⟸ ENSSTOT00000002215

Protein Domains

FCP1 homology

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000002215	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000002215.3	UniProtKB/TrEMBL
	ENSSTOT00000039436.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1000	UniProtKB/TrEMBL
InterPro	Dullard_phosphatase	UniProtKB/TrEMBL
	FCP1_dom	UniProtKB/TrEMBL
	HAD-like_sf	UniProtKB/TrEMBL
	HAD_sf	UniProtKB/TrEMBL
	TIM50	UniProtKB/TrEMBL
NCBI Gene	Ctdspl2	ENTREZGENE
PANTHER	CTD SMALL PHOSPHATASE-LIKE PROTEIN 2	UniProtKB/TrEMBL
	DULLARD PROTEIN PHOSPHATASE	UniProtKB/TrEMBL
Pfam	NIF	UniProtKB/TrEMBL
PROSITE	FCP1	UniProtKB/TrEMBL
SMART	CPDc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF56784	UniProtKB/TrEMBL
UniProt	A0A287CSD3	ENTREZGENE, UniProtKB/TrEMBL
	I3LZZ4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar