Pitpnm3 (PITPNM family member 3) - Rat Genome Database
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Gene: Pitpnm3 (PITPNM family member 3) Ictidomys tridecemlineatus
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Symbol: Pitpnm3
Name: PITPNM family member 3
RGD ID: 12442233
Description: ENCODES a protein that exhibits calcium ion binding (ortholog); receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: membrane-associated phosphatidylinositol transfer protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366771,451,974 - 1,528,864 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
Pitpnm3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366771,451,974 - 1,528,864 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PITPNM3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl176,451,263 - 6,556,555 (-)EnsemblGRCh38hg38GRCh38
GRCh38176,451,263 - 6,556,555 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37176,354,583 - 6,459,875 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36176,299,347 - 6,400,601 (-)NCBINCBI36hg18NCBI36
Build 34176,299,348 - 6,400,601NCBI
Celera176,375,097 - 6,480,841 (-)NCBI
Cytogenetic Map17p13.2-p13.1NCBI
HuRef176,249,941 - 6,355,026 (-)NCBIHuRef
CHM1_1176,364,014 - 6,469,476 (-)NCBICHM1_1
Pitpnm3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,938,354 - 72,026,715 (-)NCBIGRCm39mm39
GRCm39 Ensembl1171,938,354 - 72,026,604 (-)Ensembl
GRCm381172,047,528 - 72,135,889 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,047,528 - 72,135,778 (-)EnsemblGRCm38mm10GRCm38
MGSCv371171,861,030 - 71,949,391 (-)NCBIGRCm37mm9NCBIm37
MGSCv361171,863,723 - 71,951,973 (-)NCBImm8
Celera1179,572,423 - 79,659,844 (-)NCBICelera
Cytogenetic Map11B4NCBI
Pitpnm3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21056,674,697 - 56,766,552 (-)NCBI
Rnor_6.0 Ensembl1058,618,645 - 58,693,754 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01058,618,679 - 58,722,679 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01058,359,697 - 58,463,090 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41058,903,643 - 58,931,871 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11058,917,384 - 58,945,494 (-)NCBI
Celera1055,805,606 - 55,881,692 (-)NCBICelera
Cytogenetic Map10q24NCBI
Pitpnm3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546711,973,181 - 12,051,593 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546711,973,181 - 12,051,388 (-)NCBIChiLan1.0ChiLan1.0
PITPNM3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1176,481,590 - 6,584,379 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl176,481,590 - 6,584,379 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0176,492,567 - 6,595,645 (-)NCBIMhudiblu_PPA_v0panPan3
PITPNM3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl530,754,963 - 30,819,443 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1530,772,794 - 30,820,725 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
PITPNM3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1250,728,910 - 50,898,336 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11250,806,302 - 50,898,316 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21252,805,485 - 52,896,806 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PITPNM3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1165,830,107 - 5,934,979 (-)NCBI
ChlSab1.1 Ensembl165,834,088 - 5,916,697 (-)Ensembl
Pitpnm3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247867,484,829 - 7,568,020 (+)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021734617   ⟹   XP_021590292
RefSeq Status:
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0NW_0049366771,451,974 - 1,528,864 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_021590292 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_021590292   ⟸   XM_021734617
- Sequence:
Protein Domains
DDHD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000011585 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSSTOP00000010402 UniProtKB/TrEMBL
  ENSSTOP00000027859 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000011588 UniProtKB/TrEMBL
  ENSSTOT00000039884 ENTREZGENE, UniProtKB/TrEMBL
InterPro DDHD_dom UniProtKB/TrEMBL
  HAD-like_sf UniProtKB/TrEMBL
  LNS2/PITP UniProtKB/TrEMBL
NCBI Gene Pitpnm3 ENTREZGENE
Pfam DDHD UniProtKB/TrEMBL
PROSITE DDHD UniProtKB/TrEMBL
SMART DDHD UniProtKB/TrEMBL
  LNS2 UniProtKB/TrEMBL
Superfamily-SCOP SSF56784 UniProtKB/TrEMBL
UniProt A0A287D2V1_ICTTR UniProtKB/TrEMBL
  I3MHM3_ICTTR UniProtKB/TrEMBL