Edc3 (enhancer of mRNA decapping 3)

Gene: Edc3 (enhancer of mRNA decapping 3) Ictidomys tridecemlineatus

Analyze

Symbol:

Edc3

Name:

enhancer of mRNA decapping 3

RGD ID:

12441026

Description:

ENCODES a protein that exhibits identical protein binding (inferred); mRNA binding (inferred); RNA binding (inferred); INVOLVED IN deadenylation-independent decapping of nuclear-transcribed mRNA (inferred); P-body assembly (inferred); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 50 (ortholog); Bardet-Biedl syndrome (ortholog); Bloom syndrome (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic ribonucleoprotein granule (inferred); P-body (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

enhancer of mRNA decapping 3, transcript variant X1; enhancer of mRNA decapping 3, transcript variant X2; enhancer of mRNA decapping 3, transcript variant X3; enhancer of mRNA decapping 3, transcript variant X4; enhancer of mRNA decapping 3, transcript variant X5; enhancer of mRNA decapping 3, transcript variant X6; enhancer of mRNA decapping 3, transcript variant X7; enhancer of mRNA decapping 3, transcript variant X8; enhancer of mRNA decapping 3, transcript variant X9; enhancer of mRNA-decapping protein 3

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,326 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	33,617,256 - 33,667,390 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal recessive intellectual developmental disorder 50 (ISO)

Bardet-Biedl syndrome (ISO)

Bloom syndrome (ISO)

colorectal cancer (ISO)

genetic disease (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

deadenylation-independent decapping of nuclear-transcribed mRNA (IEA)

P-body assembly (IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic ribonucleoprotein granule (IEA)

P-body (IEA)

Molecular Function

identical protein binding (IEA)

mRNA binding (IEA)

protein binding (ISO)

RNA binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

microRNA pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Edc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,326 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936471	33,617,256 - 33,667,390 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EDC3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	15	74,630,558 - 74,696,024 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	15	74,630,558 - 74,696,292 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	15	74,922,899 - 74,988,365 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	15	72,709,952 - 72,775,413 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	15	51,872,834 - 51,938,502 (-)	NCBI		Celera
Cytogenetic Map	15	q24.1	NCBI
HuRef	15	51,721,060 - 51,786,316 (-)	NCBI		HuRef
CHM1_1	15	75,041,352 - 75,106,833 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	15	72,500,459 - 72,565,921 (-)	NCBI		T2T-CHM13v2.0

Edc3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	57,615,823 - 57,659,782 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	57,615,823 - 57,659,782 (+)	Ensembl		GRCm39 Ensembl
GRCm38	9	57,708,540 - 57,750,163 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	57,708,540 - 57,752,499 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	57,556,376 - 57,597,970 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	57,506,706 - 57,548,300 (+)	NCBI		MGSCv36	mm8
MGSCv36	9	58,243,731 - 58,286,005 (+)	NCBI		MGSCv36	mm8
Celera	9	54,969,110 - 54,979,386 (+)	NCBI		Celera
Cytogenetic Map	9	B	NCBI
cM Map	9	31.37	NCBI

Edc3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	67,002,032 - 67,047,563 (+)	NCBI		GRCr8
mRatBN7.2	8	58,106,147 - 58,151,685 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	58,106,175 - 58,151,671 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	63,639,129 - 63,684,723 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	61,916,703 - 61,962,297 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	59,781,248 - 59,826,843 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	62,482,126 - 62,527,665 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	62,482,140 - 62,526,202 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	62,259,090 - 62,304,624 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	61,472,266 - 61,517,590 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	61,527,057 - 61,536,217 (+)	NCBI
Celera	8	57,571,854 - 57,617,320 (+)	NCBI		Celera
Cytogenetic Map	8	q24	NCBI

Edc3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955450	3,193,150 - 3,249,933 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955450	3,193,150 - 3,249,933 (+)	NCBI	ChiLan1.0	ChiLan1.0

EDC3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	16	63,862,389 - 63,927,743 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	15	68,025,974 - 68,091,384 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	15	53,577,101 - 53,642,504 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	15	73,196,823 - 73,262,222 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	15	73,196,823 - 73,262,214 (-)	Ensembl	panpan1.1		panPan2

EDC3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	30	37,720,063 - 37,770,948 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	30	37,721,656 - 37,770,145 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	30	37,650,807 - 37,704,458 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	30	37,922,686 - 37,976,638 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	30	37,923,652 - 37,976,149 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	30	37,875,270 - 37,929,384 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	30	37,900,950 - 37,954,623 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	30	38,156,310 - 38,210,378 (-)	NCBI		UU_Cfam_GSD_1.0

EDC3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	58,828,727 - 58,897,919 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	58,828,693 - 58,895,475 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	63,517,304 - 63,583,530 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EDC3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	26	8,784,894 - 8,846,616 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	26	8,784,944 - 8,844,576 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	132,783,582 - 132,844,848 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Edc3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624781	35,765 - 41,990 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005316798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358221	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_013358224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021728393	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273904	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273905	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273907	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273908	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273909	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273910	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040273911	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010003700	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSSTOT00000013935 ⟹ ENSSTOP00000012486

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	33,617,371 - 33,667,390 (-)	Ensembl

RefSeq Acc Id:

ENSSTOT00000031654 ⟹ ENSSTOP00000030809

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936471	33,617,256 - 33,667,390 (-)	Ensembl

RefSeq Acc Id:

XM_005316798 ⟹ XP_005316855

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,321 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGAGTTTTGCTAAATTGCTGAGACTGGCCTCCAGTTGGTGATCAGACTTCTGCTTCAACCTC
TCCTGAGTCTCTGGGATTACAGTGGTATCACATCTAAAACATGGCTACGGATTGGCTGGGCAGT
ATTGTGTCCATCAATTGTGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTATCAGCAGTGGATC
AGGTCAGCCAGACCATTTCTCTCACTCGGCCTTTCCACAATGGAGTGAAGTGTCTTGTGCCAGA
AGTCACCTTCAGGGCAGGTGATATAACAGAATTAAAAATTCTGGAGATACCAGGTCCTGGAGAT
AACCAGCATTTTGGAGACCTTCATCAGACAGAATTAGGTCCCTCTGGTGTTGGCTGCCAAATGG
GTATCAATCACAATGGCATGGGCAAGTTGGTCAAGAAGCCAGTCTCTTCCAGTAGTGCCCCTCA
GAACATCCCTAAGAGGACAGATGTGAAGAGCCAAGATGTGACCATTTCTCCCCAGCAGCAGCAG
TGCTCAAAGAGCTATGTGGATAGGCACATGGAATCCCTGAGTCAGTCCAAAAGTTTCCGTCGGC
GGCACAACTCCTGGTCATCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAGAGTGGTTT
GAAGAATGGCCAAATGAAGAATAAAGATGACGAGTGCTTCGGGGATGATATTGAAGAGATCCCA
GACACAGATTTTGATTTTGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTTGAGGAGA
TTGATACCTATGAGAGGAGAAGTGGTACCCGTTCCCGGGGCATCCCAAATGAAAGGCCTACTCG
GTACCGCCATGACGAGAACATCCTGGAATCAGAGCCCATTGTTTACCGAAGGATCACAGTACCC
CACAATGTGAGCAAGGAATTCTGCACAGACTCTGGCCTGGTGGTACCAAGTGTTTCCTATGAAC
TACATAAAAAGCTATTATCTGTAGCTGAGAAGCATGGGCTGACCTTGGAGCGGAGACTGGAGAT
GACAGGTGTATGTGCCAGTCAGATGGCGCTTACCCTTCTTGGAGGACCTAATAGGTTGAATCCT
AAGAATGTTCACCAGAGGCCCACAGTGGCTTTGCTGTGTGGGCCCCATGTGAAGGGGGCTCAGG
GTATTAGTTGCGGAAGGCACCTAGCCAACCATGATGTGCAGGTCATCCTTTTCTTGCCCAATTT
TGTCAAGATGCTAGAGTCCATTACCAACGAGCTGTCTCTTTTCAGCAAGACCCAGGGTCAGCAA
GTATCTAGCCTCAAAGATCTGCCCACTAGCCCTGTTGACCTGGTTATCAACTGCCTGGATTGCC
CCGAGAATGCCTTCCTGCGGGATCAGCCCTGGTACAAAGCGGCCGTGGCCTGGGCCAACCAGAA
CCGGGCACCAGTACTCAGCATAGACCCTCCTGTGCATGAAGTCGAACAGGGCATCGATGCCAAA
TGGTCACTGGCACTGGGCCTGCCTCTGCCACTGGGGGAGCACGCAGGCCGTGTCTATTTGTGTG
ACATTGGCATTCCCCAGCAAGTCTTCCAGGAGGTGGGCATCAACTACCATTCACCCTTTGGCTG
CAAGTTTGTCATCCCTCTACATTCTGCCTAGAGGGGCCCTGGGCAGACTGGACTCTACAGTCCC
TTGCTCCTGCCACCAAACTTGACGATGAACGCCTTAAGGATGTGAAGCTTCATGGACCTTATTG
TTAAGTTTTTCTTTATTT

hide sequence

RefSeq Acc Id:

XM_013358221 ⟹ XP_013213675

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,324 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGAGTAGGCGGCTGTCTTGTTGGCTAAAGAAGACAGATATTCTTTGCCCTATTTTTGTGGAG
TGACACACAATATCAACAAACAAGGAAATACAGATGGTTTTGCTAAATTGCTGAGACTGGCCTC
CAGTTGGTGATCAGACTTCTGCTTCAACCTCTCCTGAGTCTCTGGGATTACAGTGGTATCACAT
CTAAAACATGGCTACGGATTGGCTGGGCAGTATTGTGTCCATCAATTGTGGAGATAGCTTGGGT
GTCTATCAGGGAAGAGTATCAGCAGTGGATCAGGTCAGCCAGACCATTTCTCTCACTCGGCCTT
TCCACAATGGAGTGAAGTGTCTTGTGCCAGAAGTCACCTTCAGGGCAGGTGATATAACAGAATT
AAAAATTCTGGAGATACCAGGTCCTGGAGATAACCAGCATTTTGGAGACCTTCATCAGACAGAA
TTAGGTCCCTCTGGTGTTGGCTGCCAAATGGGTATCAATCACAATGGCATGGGCAAGTTGGTCA
AGAAGCCAGTCTCTTCCAGTAGTGCCCCTCAGAACATCCCTAAGAGGACAGATGTGAAGAGCCA
AGATGTGACCATTTCTCCCCAGCAGCAGCAGTGCTCAAAGAGCTATGTGGATAGGCACATGGAA
TCCCTGAGTCAGTCCAAAAGTTTCCGTCGGCGGCACAACTCCTGGTCATCTAGTAGCAGGCACC
CAAATCAGGCAACTCCAAAGAAGAGTGGTTTGAAGAATGGCCAAATGAAGAATAAAGATGACGA
GTGCTTCGGGGATGATATTGAAGAGATCCCAGACACAGATTTTGATTTTGAAGGGAACCTGGCC
CTTTTTGACAAGGCAGCTGTGTTTGAGGAGATTGATACCTATGAGAGGAGAAGTGGTACCCGTT
CCCGGGGCATCCCAAATGAAAGGCCTACTCGGTACCGCCATGACGAGAACATCCTGGAATCAGA
GCCCATTGTTTACCGAAGGATCACAGTACCCCACAATGTGAGCAAGGAATTCTGCACAGACTCT
GGCCTGGTGGTACCAAGTGTTTCCTATGAACTACATAAAAAGCTATTATCTGTAGCTGAGAAGC
ATGGGCTGACCTTGGAGCGGAGACTGGAGATGACAGGTGTATGTGCCAGTCAGATGGCGCTTAC
CCTTCTTGGAGGACCTAATAGGTTGAATCCTAAGAATGTTCACCAGAGGCCCACAGTGGCTTTG
CTGTGTGGGCCCCATGTGAAGGGGGCTCAGGGTATTAGTTGCGGAAGGCACCTAGCCAACCATG
ATGTGCAGGTCATCCTTTTCTTGCCCAATTTTGTCAAGATGCTAGAGTCCATTACCAACGAGCT
GTCTCTTTTCAGCAAGACCCAGGGTCAGCAAGTATCTAGCCTCAAAGATCTGCCCACTAGCCCT
GTTGACCTGGTTATCAACTGCCTGGATTGCCCCGAGAATGCCTTCCTGCGGGATCAGCCCTGGT
ACAAAGCGGCCGTGGCCTGGGCCAACCAGAACCGGGCACCAGTACTCAGCATAGACCCTCCTGT
GCATGAAGTCGAACAGGGCATCGATGCCAAATGGTCACTGGCACTGGGCCTGCCTCTGCCACTG
GGGGAGCACGCAGGCCGTGTCTATTTGTGTGACATTGGCATTCCCCAGCAAGTCTTCCAGGAGG
TGGGCATCAACTACCATTCACCCTTTGGCTGCAAGTTTGTCATCCCTCTACATTCTGCCTAGAG
GGGCCCTGGGCAGACTGGACTCTACAGTCCCTTGCTCCTGCCACCAAACTTGACGATGAACGCC
TTAAGGATGTGAAGCTTCATGGACCTTATTGTTAAGTTTTTCTTTATTT

hide sequence

RefSeq Acc Id:

XM_021728357 ⟹ XP_021584032

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,321 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGAGCTGTCTTGTTGGCTAAAGAAGACAGATATTCTTTGCCCTATTTTTGTGGAGTGACACA
CAATATCAACAAACAAGGAAATACAGATGGTTTTGCTAAATTGCTGAGACTGGCCTCCAGTTGG
TGATCAGACTTCTGCTTCAACCTCTCCTGAGTCTCTGGGATTACAGTGGTATCACATCTAAAAC
ATGGCTACGGATTGGCTGGGCAGTATTGTGTCCATCAATTGTGGAGATAGCTTGGGTGTCTATC
AGGGAAGAGTATCAGCAGTGGATCAGGTCAGCCAGACCATTTCTCTCACTCGGCCTTTCCACAA
TGGAGTGAAGTGTCTTGTGCCAGAAGTCACCTTCAGGGCAGGTGATATAACAGAATTAAAAATT
CTGGAGATACCAGGTCCTGGAGATAACCAGCATTTTGGAGACCTTCATCAGACAGAATTAGGTC
CCTCTGGTGTTGGCTGCCAAATGGGTATCAATCACAATGGCATGGGCAAGTTGGTCAAGAAGCC
AGTCTCTTCCAGTAGTGCCCCTCAGAACATCCCTAAGAGGACAGATGTGAAGAGCCAAGATGTG
ACCATTTCTCCCCAGCAGCAGCAGTGCTCAAAGAGCTATGTGGATAGGCACATGGAATCCCTGA
GTCAGTCCAAAAGTTTCCGTCGGCGGCACAACTCCTGGTCATCTAGTAGCAGGCACCCAAATCA
GGCAACTCCAAAGAAGAGTGGTTTGAAGAATGGCCAAATGAAGAATAAAGATGACGAGTGCTTC
GGGGATGATATTGAAGAGATCCCAGACACAGATTTTGATTTTGAAGGGAACCTGGCCCTTTTTG
ACAAGGCAGCTGTGTTTGAGGAGATTGATACCTATGAGAGGAGAAGTGGTACCCGTTCCCGGGG
CATCCCAAATGAAAGGCCTACTCGGTACCGCCATGACGAGAACATCCTGGAATCAGAGCCCATT
GTTTACCGAAGGATCACAGTACCCCACAATGTGAGCAAGGAATTCTGCACAGACTCTGGCCTGG
TGGTACCAAGTGTTTCCTATGAACTACATAAAAAGCTATTATCTGTAGCTGAGAAGCATGGGCT
GACCTTGGAGCGGAGACTGGAGATGACAGGTGTATGTGCCAGTCAGATGGCGCTTACCCTTCTT
GGAGGACCTAATAGGTTGAATCCTAAGAATGTTCACCAGAGGCCCACAGTGGCTTTGCTGTGTG
GGCCCCATGTGAAGGGGGCTCAGGGTATTAGTTGCGGAAGGCACCTAGCCAACCATGATGTGCA
GGTCATCCTTTTCTTGCCCAATTTTGTCAAGATGCTAGAGTCCATTACCAACGAGCTGTCTCTT
TTCAGCAAGACCCAGGGTCAGCAAGTATCTAGCCTCAAAGATCTGCCCACTAGCCCTGTTGACC
TGGTTATCAACTGCCTGGATTGCCCCGAGAATGCCTTCCTGCGGGATCAGCCCTGGTACAAAGC
GGCCGTGGCCTGGGCCAACCAGAACCGGGCACCAGTACTCAGCATAGACCCTCCTGTGCATGAA
GTCGAACAGGGCATCGATGCCAAATGGTCACTGGCACTGGGCCTGCCTCTGCCACTGGGGGAGC
ACGCAGGCCGTGTCTATTTGTGTGACATTGGCATTCCCCAGCAAGTCTTCCAGGAGGTGGGCAT
CAACTACCATTCACCCTTTGGCTGCAAGTTTGTCATCCCTCTACATTCTGCCTAGAGGGGCCCT
GGGCAGACTGGACTCTACAGTCCCTTGCTCCTGCCACCAAACTTGACGATGAACGCCTTAAGGA
TGTGAAGCTTCATGGACCTTATTGTTAAGTTTTTCTTTATTT

hide sequence

RefSeq Acc Id:

XM_021728363 ⟹ XP_021584038

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,325 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,663,733 (-)	NCBI

Sequence:

show sequence

ATTTTTATGTGGTGCTGAGGATGGAACCCAGCGCCCCGCGCATGCCAGGCTGTCTTGTTGGCTA
AAGAAGACAGATATTCTTTGCCCTATTTTTGTGGAGTGACACACAATATCAACAAACAAGGAAA
TACAGATGTGGTATCACATCTAAAACATGGCTACGGATTGGCTGGGCAGTATTGTGTCCATCAA
TTGTGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTATCAGCAGTGGATCAGGTCAGCCAGACC
ATTTCTCTCACTCGGCCTTTCCACAATGGAGTGAAGTGTCTTGTGCCAGAAGTCACCTTCAGGG
CAGGTGATATAACAGAATTAAAAATTCTGGAGATACCAGGTCCTGGAGATAACCAGCATTTTGG
AGACCTTCATCAGACAGAATTAGGTCCCTCTGGTGTTGGCTGCCAAATGGGTATCAATCACAAT
GGCATGGGCAAGTTGGTCAAGAAGCCAGTCTCTTCCAGTAGTGCCCCTCAGAACATCCCTAAGA
GGACAGATGTGAAGAGCCAAGATGTGACCATTTCTCCCCAGCAGCAGCAGTGCTCAAAGAGCTA
TGTGGATAGGCACATGGAATCCCTGAGTCAGTCCAAAAGTTTCCGTCGGCGGCACAACTCCTGG
TCATCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAGAGTGGTTTGAAGAATGGCCAAA
TGAAGAATAAAGATGACGAGTGCTTCGGGGATGATATTGAAGAGATCCCAGACACAGATTTTGA
TTTTGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTTGAGGAGATTGATACCTATGAG
AGGAGAAGTGGTACCCGTTCCCGGGGCATCCCAAATGAAAGGCCTACTCGGTACCGCCATGACG
AGAACATCCTGGAATCAGAGCCCATTGTTTACCGAAGGATCACAGTACCCCACAATGTGAGCAA
GGAATTCTGCACAGACTCTGGCCTGGTGGTACCAAGTGTTTCCTATGAACTACATAAAAAGCTA
TTATCTGTAGCTGAGAAGCATGGGCTGACCTTGGAGCGGAGACTGGAGATGACAGGTGTATGTG
CCAGTCAGATGGCGCTTACCCTTCTTGGAGGACCTAATAGGTTGAATCCTAAGAATGTTCACCA
GAGGCCCACAGTGGCTTTGCTGTGTGGGCCCCATGTGAAGGGGGCTCAGGGTATTAGTTGCGGA
AGGCACCTAGCCAACCATGATGTGCAGGTCATCCTTTTCTTGCCCAATTTTGTCAAGATGCTAG
AGTCCATTACCAACGAGCTGTCTCTTTTCAGCAAGACCCAGGGTCAGCAAGTATCTAGCCTCAA
AGATCTGCCCACTAGCCCTGTTGACCTGGTTATCAACTGCCTGGATTGCCCCGAGAATGCCTTC
CTGCGGGATCAGCCCTGGTACAAAGCGGCCGTGGCCTGGGCCAACCAGAACCGGGCACCAGTAC
TCAGCATAGACCCTCCTGTGCATGAAGTCGAACAGGGCATCGATGCCAAATGGTCACTGGCACT
GGGCCTGCCTCTGCCACTGGGGGAGCACGCAGGCCGTGTCTATTTGTGTGACATTGGCATTCCC
CAGCAAGTCTTCCAGGAGGTGGGCATCAACTACCATTCACCCTTTGGCTGCAAGTTTGTCATCC
CTCTACATTCTGCCTAGAGGGGCCCTGGGCAGACTGGACTCTACAGTCCCTTGCTCCTGCCACC
AAACTTGACGATGAACGCCTTAAGGATGTGAAGCTTCATGGACCTTATTGTTAAGTTTTTCTTT
ATTT

hide sequence

RefSeq Acc Id:

XM_021728378 ⟹ XP_021584053

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,324 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGAGTAGGCGGTTTTGCTAAATTGCTGAGACTGGCCTCCAGTTGGTGATCAGACTTCTGCTT
CAACCTCTCCTGAGTCTCTGGGATTACAGTGGTATCACATCTAAAACATGGCTACGGATTGGCT
GGGCAGTATTGTGTCCATCAATTGTGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTATCAGCA
GTGGATCAGGTCAGCCAGACCATTTCTCTCACTCGGCCTTTCCACAATGGAGTGAAGTGTCTTG
TGCCAGAAGTCACCTTCAGGGCAGGTGATATAACAGAATTAAAAATTCTGGAGATACCAGGTCC
TGGAGATAACCAGCATTTTGGAGACCTTCATCAGACAGAATTAGGTCCCTCTGGTGTTGGCTGC
CAAATGGGTATCAATCACAATGGCATGGGCAAGTTGGTCAAGAAGCCAGTCTCTTCCAGTAGTG
CCCCTCAGAACATCCCTAAGAGGACAGATGTGAAGAGCCAAGATGTGACCATTTCTCCCCAGCA
GCAGCAGTGCTCAAAGAGCTATGTGGATAGGCACATGGAATCCCTGAGTCAGTCCAAAAGTTTC
CGTCGGCGGCACAACTCCTGGTCATCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAGA
GTGGTTTGAAGAATGGCCAAATGAAGAATAAAGATGACGAGTGCTTCGGGGATGATATTGAAGA
GATCCCAGACACAGATTTTGATTTTGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTT
GAGGAGATTGATACCTATGAGAGGAGAAGTGGTACCCGTTCCCGGGGCATCCCAAATGAAAGGC
CTACTCGGTACCGCCATGACGAGAACATCCTGGAATCAGAGCCCATTGTTTACCGAAGGATCAC
AGTACCCCACAATGTGAGCAAGGAATTCTGCACAGACTCTGGCCTGGTGGTACCAAGTGTTTCC
TATGAACTACATAAAAAGCTATTATCTGTAGCTGAGAAGCATGGGCTGACCTTGGAGCGGAGAC
TGGAGATGACAGGTGTATGTGCCAGTCAGATGGCGCTTACCCTTCTTGGAGGACCTAATAGGTT
GAATCCTAAGAATGTTCACCAGAGGCCCACAGTGGCTTTGCTGTGTGGGCCCCATGTGAAGGGG
GCTCAGGGTATTAGTTGCGGAAGGCACCTAGCCAACCATGATGTGCAGGTCATCCTTTTCTTGC
CCAATTTTGTCAAGATGCTAGAGTCCATTACCAACGAGCTGTCTCTTTTCAGCAAGACCCAGGG
TCAGCAAGTATCTAGCCTCAAAGATCTGCCCACTAGCCCTGTTGACCTGGTTATCAACTGCCTG
GATTGCCCCGAGAATGCCTTCCTGCGGGATCAGCCCTGGTACAAAGCGGCCGTGGCCTGGGCCA
ACCAGAACCGGGCACCAGTACTCAGCATAGACCCTCCTGTGCATGAAGTCGAACAGGGCATCGA
TGCCAAATGGTCACTGGCACTGGGCCTGCCTCTGCCACTGGGGGAGCACGCAGGCCGTGTCTAT
TTGTGTGACATTGGCATTCCCCAGCAAGTCTTCCAGGAGGTGGGCATCAACTACCATTCACCCT
TTGGCTGCAAGTTTGTCATCCCTCTACATTCTGCCTAGAGGGGCCCTGGGCAGACTGGACTCTA
CAGTCCCTTGCTCCTGCCACCAAACTTGACGATGAACGCCTTAAGGATGTGAAGCTTCATGGAC
CTTATTGTTAAGTTTTTCTTTATTT

hide sequence

RefSeq Acc Id:

XM_021728386 ⟹ XP_021584061

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,326 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGAGTAGGCGTGGTATCACATCTAAAACATGGCTACGGATTGGCTGGGCAGTATTGTGTCCA
TCAATTGTGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTATCAGCAGTGGATCAGGTCAGCCA
GACCATTTCTCTCACTCGGCCTTTCCACAATGGAGTGAAGTGTCTTGTGCCAGAAGTCACCTTC
AGGGCAGGTGATATAACAGAATTAAAAATTCTGGAGATACCAGGTCCTGGAGATAACCAGCATT
TTGGAGACCTTCATCAGACAGAATTAGGTCCCTCTGGTGTTGGCTGCCAAATGGGTATCAATCA
CAATGGCATGGGCAAGTTGGTCAAGAAGCCAGTCTCTTCCAGTAGTGCCCCTCAGAACATCCCT
AAGAGGACAGATGTGAAGAGCCAAGATGTGACCATTTCTCCCCAGCAGCAGCAGTGCTCAAAGA
GCTATGTGGATAGGCACATGGAATCCCTGAGTCAGTCCAAAAGTTTCCGTCGGCGGCACAACTC
CTGGTCATCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAGAGTGGTTTGAAGAATGGC
CAAATGAAGAATAAAGATGACGAGTGCTTCGGGGATGATATTGAAGAGATCCCAGACACAGATT
TTGATTTTGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTTGAGGAGATTGATACCTA
TGAGAGGAGAAGTGGTACCCGTTCCCGGGGCATCCCAAATGAAAGGCCTACTCGGTACCGCCAT
GACGAGAACATCCTGGAATCAGAGCCCATTGTTTACCGAAGGATCACAGTACCCCACAATGTGA
GCAAGGAATTCTGCACAGACTCTGGCCTGGTGGTACCAAGTGTTTCCTATGAACTACATAAAAA
GCTATTATCTGTAGCTGAGAAGCATGGGCTGACCTTGGAGCGGAGACTGGAGATGACAGGTGTA
TGTGCCAGTCAGATGGCGCTTACCCTTCTTGGAGGACCTAATAGGTTGAATCCTAAGAATGTTC
ACCAGAGGCCCACAGTGGCTTTGCTGTGTGGGCCCCATGTGAAGGGGGCTCAGGGTATTAGTTG
CGGAAGGCACCTAGCCAACCATGATGTGCAGGTCATCCTTTTCTTGCCCAATTTTGTCAAGATG
CTAGAGTCCATTACCAACGAGCTGTCTCTTTTCAGCAAGACCCAGGGTCAGCAAGTATCTAGCC
TCAAAGATCTGCCCACTAGCCCTGTTGACCTGGTTATCAACTGCCTGGATTGCCCCGAGAATGC
CTTCCTGCGGGATCAGCCCTGGTACAAAGCGGCCGTGGCCTGGGCCAACCAGAACCGGGCACCA
GTACTCAGCATAGACCCTCCTGTGCATGAAGTCGAACAGGGCATCGATGCCAAATGGTCACTGG
CACTGGGCCTGCCTCTGCCACTGGGGGAGCACGCAGGCCGTGTCTATTTGTGTGACATTGGCAT
TCCCCAGCAAGTCTTCCAGGAGGTGGGCATCAACTACCATTCACCCTTTGGCTGCAAGTTTGTC
ATCCCTCTACATTCTGCCTAGAGGGGCCCTGGGCAGACTGGACTCTACAGTCCCTTGCTCCTGC
CACCAAACTTGACGATGAACGCCTTAAGGATGTGAAGCTTCATGGACCTTATTGTTAAGTTTTT
CTTTATTT

hide sequence

RefSeq Acc Id:

XM_021728393 ⟹ XP_021584068

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,324 (-)	NCBI
SpeTri2.0	NW_004936471	33,617,256 - 33,667,371 (-)	NCBI

Sequence:

show sequence

TTCCGGCACGGCAATCGTGGTTGTGGGGGTGGGGTGGAGAAGCCCCCTCTGTGGGTCTTTTCGC
GGTGCGGGGTCGGCTTGGTGTGTTGTGTGGAGGAGGCCCAGACCAGACGGCGCGGAGCTGGGAG
CGAGATGGTATCACATCTAAAACATGGCTACGGATTGGCTGGGCAGTATTGTGTCCATCAATTG
TGGAGATAGCTTGGGTGTCTATCAGGGAAGAGTATCAGCAGTGGATCAGGTCAGCCAGACCATT
TCTCTCACTCGGCCTTTCCACAATGGAGTGAAGTGTCTTGTGCCAGAAGTCACCTTCAGGGCAG
GTGATATAACAGAATTAAAAATTCTGGAGATACCAGGTCCTGGAGATAACCAGCATTTTGGAGA
CCTTCATCAGACAGAATTAGGTCCCTCTGGTGTTGGCTGCCAAATGGGTATCAATCACAATGGC
ATGGGCAAGTTGGTCAAGAAGCCAGTCTCTTCCAGTAGTGCCCCTCAGAACATCCCTAAGAGGA
CAGATGTGAAGAGCCAAGATGTGACCATTTCTCCCCAGCAGCAGCAGTGCTCAAAGAGCTATGT
GGATAGGCACATGGAATCCCTGAGTCAGTCCAAAAGTTTCCGTCGGCGGCACAACTCCTGGTCA
TCTAGTAGCAGGCACCCAAATCAGGCAACTCCAAAGAAGAGTGGTTTGAAGAATGGCCAAATGA
AGAATAAAGATGACGAGTGCTTCGGGGATGATATTGAAGAGATCCCAGACACAGATTTTGATTT
TGAAGGGAACCTGGCCCTTTTTGACAAGGCAGCTGTGTTTGAGGAGATTGATACCTATGAGAGG
AGAAGTGGTACCCGTTCCCGGGGCATCCCAAATGAAAGGCCTACTCGGTACCGCCATGACGAGA
ACATCCTGGAATCAGAGCCCATTGTTTACCGAAGGATCACAGTACCCCACAATGTGAGCAAGGA
ATTCTGCACAGACTCTGGCCTGGTGGTACCAAGTGTTTCCTATGAACTACATAAAAAGCTATTA
TCTGTAGCTGAGAAGCATGGGCTGACCTTGGAGCGGAGACTGGAGATGACAGGTGTATGTGCCA
GTCAGATGGCGCTTACCCTTCTTGGAGGACCTAATAGGTTGAATCCTAAGAATGTTCACCAGAG
GCCCACAGTGGCTTTGCTGTGTGGGCCCCATGTGAAGGGGGCTCAGGGTATTAGTTGCGGAAGG
CACCTAGCCAACCATGATGTGCAGGTCATCCTTTTCTTGCCCAATTTTGTCAAGATGCTAGAGT
CCATTACCAACGAGCTGTCTCTTTTCAGCAAGACCCAGGGTCAGCAAGTATCTAGCCTCAAAGA
TCTGCCCACTAGCCCTGTTGACCTGGTTATCAACTGCCTGGATTGCCCCGAGAATGCCTTCCTG
CGGGATCAGCCCTGGTACAAAGCGGCCGTGGCCTGGGCCAACCAGAACCGGGCACCAGTACTCA
GCATAGACCCTCCTGTGCATGAAGTCGAACAGGGCATCGATGCCAAATGGTCACTGGCACTGGG
CCTGCCTCTGCCACTGGGGGAGCACGCAGGCCGTGTCTATTTGTGTGACATTGGCATTCCCCAG
CAAGTCTTCCAGGAGGTGGGCATCAACTACCATTCACCCTTTGGCTGCAAGTTTGTCATCCCTC
TACATTCTGCCTAGAGGGGCCCTGGGCAGACTGGACTCTACAGTCCCTTGCTCCTGCCACCAAA
CTTGACGATGAACGCCTTAAGGATGTGAAGCTTCATGGACCTTATTGTTAAGTTTTTCTTTATT
T

hide sequence

RefSeq Acc Id:

XM_040273904 ⟹ XP_040129838

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,325 (-)	NCBI

RefSeq Acc Id:

XM_040273905 ⟹ XP_040129839

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,114 (-)	NCBI

RefSeq Acc Id:

XM_040273906 ⟹ XP_040129840

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,818,658 (-)	NCBI

RefSeq Acc Id:

XM_040273907 ⟹ XP_040129841

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,324 (-)	NCBI

RefSeq Acc Id:

XM_040273908 ⟹ XP_040129842

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,114 (-)	NCBI

RefSeq Acc Id:

XM_040273909 ⟹ XP_040129843

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,818,658 (-)	NCBI

RefSeq Acc Id:

XM_040273910 ⟹ XP_040129844

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,321 (-)	NCBI

RefSeq Acc Id:

XM_040273911 ⟹ XP_040129845

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024408640	115,767,399 - 115,819,114 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005316855	(Get FASTA)	NCBI Sequence Viewer
	XP_013213675	(Get FASTA)	NCBI Sequence Viewer
	XP_021584032	(Get FASTA)	NCBI Sequence Viewer
	XP_021584038	(Get FASTA)	NCBI Sequence Viewer
	XP_021584053	(Get FASTA)	NCBI Sequence Viewer
	XP_021584061	(Get FASTA)	NCBI Sequence Viewer
	XP_021584068	(Get FASTA)	NCBI Sequence Viewer
	XP_040129838	(Get FASTA)	NCBI Sequence Viewer
	XP_040129839	(Get FASTA)	NCBI Sequence Viewer
	XP_040129840	(Get FASTA)	NCBI Sequence Viewer
	XP_040129841	(Get FASTA)	NCBI Sequence Viewer
	XP_040129842	(Get FASTA)	NCBI Sequence Viewer
	XP_040129843	(Get FASTA)	NCBI Sequence Viewer
	XP_040129844	(Get FASTA)	NCBI Sequence Viewer
	XP_040129845	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000012486.3
	ENSSTOP00000030809.1
GenBank Protein	KAG3262278	(Get FASTA)	NCBI Sequence Viewer
	KAG3262279	(Get FASTA)	NCBI Sequence Viewer
	KAG3262280	(Get FASTA)	NCBI Sequence Viewer
	KAG3262281	(Get FASTA)	NCBI Sequence Viewer
	KAG3262282	(Get FASTA)	NCBI Sequence Viewer
	KAG3262283	(Get FASTA)	NCBI Sequence Viewer
	KAG3262284	(Get FASTA)	NCBI Sequence Viewer
	KAG3262285	(Get FASTA)	NCBI Sequence Viewer
	KAG3262286	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005316855 ⟸ XM_005316798

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_013213675 ⟸ XM_013358221

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_021584068 ⟸ XM_021728393

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_021584032 ⟸ XM_021728357

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_021584061 ⟸ XM_021728386

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_021584053 ⟸ XM_021728378

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:

XP_021584038 ⟸ XM_021728363

- UniProtKB:

I3MLZ0 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATDWLGSIVSINCGDSLGVYQGRVSAVDQVSQTISLTRPFHNGVKCLVPEVTFRAGDITELKI
LEIPGPGDNQHFGDLHQTELGPSGVGCQMGINHNGMGKLVKKPVSSSSAPQNIPKRTDVKSQDV
TISPQQQQCSKSYVDRHMESLSQSKSFRRRHNSWSSSSRHPNQATPKKSGLKNGQMKNKDDECF
GDDIEEIPDTDFDFEGNLALFDKAAVFEEIDTYERRSGTRSRGIPNERPTRYRHDENILESEPI
VYRRITVPHNVSKEFCTDSGLVVPSVSYELHKKLLSVAEKHGLTLERRLEMTGVCASQMALTLL
GGPNRLNPKNVHQRPTVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKMLESITNELSL
FSKTQGQQVSSLKDLPTSPVDLVINCLDCPENAFLRDQPWYKAAVAWANQNRAPVLSIDPPVHE
VEQGIDAKWSLALGLPLPLGEHAGRVYLCDIGIPQQVFQEVGINYHSPFGCKFVIPLHSA

hide sequence

RefSeq Acc Id:	XP_040129838 ⟸ XM_040273904
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129841 ⟸ XM_040273907
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129844 ⟸ XM_040273910
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129845 ⟸ XM_040273911
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129842 ⟸ XM_040273908
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129839 ⟸ XM_040273905
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129843 ⟸ XM_040273909
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040129840 ⟸ XM_040273906
- UniProtKB:	I3MLZ0 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSSTOP00000012486 ⟸ ENSSTOT00000013935

RefSeq Acc Id:

ENSSTOP00000030809 ⟸ ENSSTOT00000031654

Protein Domains

DFDF Sm YjeF N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000013936	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000013935.3	UniProtKB/TrEMBL
	ENSSTOT00000031654.1	UniProtKB/TrEMBL
Gene3D-CATH	2.30.30.100	UniProtKB/TrEMBL
	3.40.50.10260	UniProtKB/TrEMBL
InterPro	DFDF	UniProtKB/TrEMBL
	FDF_dom	UniProtKB/TrEMBL
	IPR047575	UniProtKB/TrEMBL
	Lsm14-like_N	UniProtKB/TrEMBL
	Lsm16_N	UniProtKB/TrEMBL
	YjeF_N_dom	UniProtKB/TrEMBL
	YjeF_N_dom_sf	UniProtKB/TrEMBL
NCBI Gene	Edc3	ENTREZGENE
PANTHER	ENHANCER OF MRNA-DECAPPING PROTEIN 3	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	Edc3_linker	UniProtKB/TrEMBL
	FDF	UniProtKB/TrEMBL
	LSM14	UniProtKB/TrEMBL
	YjeF_N	UniProtKB/TrEMBL
PROSITE	DFDF	UniProtKB/TrEMBL
	PS52002	UniProtKB/TrEMBL
	YJEF_N	UniProtKB/TrEMBL
SMART	FDF	UniProtKB/TrEMBL
	LSM14	UniProtKB/TrEMBL
Superfamily-SCOP	SSF64153	UniProtKB/TrEMBL
UniProt	I3MLZ0	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

RGD Manual Annotations