UBTF (upstream binding transcription factor) - Rat Genome Database

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Gene: UBTF (upstream binding transcription factor) Canis lupus familiaris
Analyze
Symbol: UBTF
Name: upstream binding transcription factor
RGD ID: 12435084
Description: ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase I cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); rDNA heterochromatin assembly (ortholog); PARTICIPATES IN cisplatin drug pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Childhood-Onset Neurodegeneration with Brain Atrophy (ortholog); genetic disease (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: nucleolar transcription factor 1; upstream binding transcription factor, RNA polymerase I
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1919,177,778 - 19,189,805 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl919,179,174 - 19,189,181 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha918,565,897 - 18,580,760 (+)NCBI
ROS_Cfam_1.0919,870,605 - 19,885,473 (+)NCBI
ROS_Cfam_1.0 Ensembl919,870,765 - 19,887,013 (+)Ensembl
UMICH_Zoey_3.1918,724,292 - 18,739,147 (+)NCBI
UNSW_CanFamBas_1.0918,907,547 - 18,922,382 (+)NCBI
UU_Cfam_GSD_1.0919,051,984 - 19,066,857 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
UBTF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1919,177,778 - 19,189,805 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl919,179,174 - 19,189,181 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha918,565,897 - 18,580,760 (+)NCBI
ROS_Cfam_1.0919,870,605 - 19,885,473 (+)NCBI
ROS_Cfam_1.0 Ensembl919,870,765 - 19,887,013 (+)Ensembl
UMICH_Zoey_3.1918,724,292 - 18,739,147 (+)NCBI
UNSW_CanFamBas_1.0918,907,547 - 18,922,382 (+)NCBI
UU_Cfam_GSD_1.0919,051,984 - 19,066,857 (+)NCBI
UBTF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381744,205,040 - 44,221,304 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1744,205,033 - 44,221,626 (-)EnsemblGRCh38hg38GRCh38
GRCh371742,282,408 - 42,298,672 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361739,637,927 - 39,653,776 (-)NCBINCBI36hg18NCBI36
Build 341739,639,487 - 39,651,190NCBI
Celera1738,991,137 - 39,006,972 (-)NCBI
Cytogenetic Map17q21.31NCBI
HuRef1738,046,143 - 38,062,692 (-)NCBIHuRef
CHM1_11742,517,584 - 42,534,295 (-)NCBICHM1_1
Ubtf
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911102,195,386 - 102,214,738 (-)NCBIGRCm39mm39
GRCm39 Ensembl11102,195,386 - 102,210,568 (-)Ensembl
GRCm3811102,304,560 - 102,323,649 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11102,304,560 - 102,319,742 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711102,165,874 - 102,180,410 (-)NCBIGRCm37mm9NCBIm37
MGSCv3611102,122,081 - 102,132,564 (-)NCBImm8
Celera11114,011,670 - 114,026,179 (-)NCBICelera
Cytogenetic Map11DNCBI
Ubtf
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21087,258,217 - 87,274,291 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1087,258,217 - 87,272,969 (-)Ensembl
Rnor_6.01090,250,275 - 90,265,772 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1090,250,275 - 90,265,017 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01090,036,613 - 90,051,685 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41091,385,368 - 91,398,458 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11091,400,434 - 91,410,657 (-)NCBI
Celera1085,973,415 - 86,009,030 (-)NCBICelera
Cytogenetic Map10q32.1NCBI
Ubtf
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545117,294,251 - 17,302,746 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545117,294,163 - 17,302,807 (-)NCBIChiLan1.0ChiLan1.0
UBTF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11713,343,349 - 13,356,836 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1713,343,349 - 13,356,836 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01713,176,228 - 13,191,283 (+)NCBIMhudiblu_PPA_v0panPan3
Ubtf
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560218,507,113 - 18,523,420 (+)NCBI
SpeTri2.0NW_004936541671,178 - 687,485 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UBTF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1218,989,836 - 19,006,141 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11218,989,833 - 19,006,145 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21219,292,305 - 19,302,395 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UBTF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11662,168,288 - 62,184,902 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1662,171,666 - 62,182,320 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607732,937,552 - 32,954,106 (+)NCBIVero_WHO_p1.0
Ubtf
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624795768,627 - 779,174 (+)NCBIHetGla_female_1.0hetGla2


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 3 19 3 6 3 6 4 12 10 6
Low 2 3 3 3 2 8
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_038485348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038485352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038611087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038629373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038676272 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_537622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000022660   ⟹   ENSCAFP00000021044
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl919,179,174 - 19,189,181 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000079708   ⟹   ENSCAFP00000045646
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl919,179,174 - 19,189,033 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845015445   ⟹   ENSCAFP00845011995
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,870,765 - 19,885,520 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845015527   ⟹   ENSCAFP00845012061
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,870,765 - 19,885,520 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845015631   ⟹   ENSCAFP00845012151
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,870,765 - 19,885,470 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845015691   ⟹   ENSCAFP00845012203
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,871,295 - 19,885,473 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845015780   ⟹   ENSCAFP00845012271
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl919,872,800 - 19,887,013 (+)Ensembl
RefSeq Acc Id: XM_038485348   ⟹   XP_038341276
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,725,000 - 18,739,147 (+)NCBI
RefSeq Acc Id: XM_038485349   ⟹   XP_038341277
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,726,385 - 18,739,147 (+)NCBI
RefSeq Acc Id: XM_038485350   ⟹   XP_038341278
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,726,871 - 18,739,147 (+)NCBI
RefSeq Acc Id: XM_038485351   ⟹   XP_038341279
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,724,292 - 18,739,147 (+)NCBI
RefSeq Acc Id: XM_038485352   ⟹   XP_038341280
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1918,725,000 - 18,739,147 (+)NCBI
RefSeq Acc Id: XM_038547115   ⟹   XP_038403043
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0919,052,695 - 19,066,857 (+)NCBI
RefSeq Acc Id: XM_038547116   ⟹   XP_038403044
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0919,054,082 - 19,066,857 (+)NCBI
RefSeq Acc Id: XM_038547117   ⟹   XP_038403045
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0919,054,568 - 19,066,857 (+)NCBI
RefSeq Acc Id: XM_038547118   ⟹   XP_038403046
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0919,051,984 - 19,066,857 (+)NCBI
RefSeq Acc Id: XM_038547119   ⟹   XP_038403047
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0919,052,695 - 19,066,857 (+)NCBI
RefSeq Acc Id: XM_038611083   ⟹   XP_038467011
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,908,253 - 18,922,382 (+)NCBI
RefSeq Acc Id: XM_038611084   ⟹   XP_038467012
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,909,638 - 18,922,382 (+)NCBI
RefSeq Acc Id: XM_038611085   ⟹   XP_038467013
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,910,124 - 18,922,382 (+)NCBI
RefSeq Acc Id: XM_038611086   ⟹   XP_038467014
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,907,547 - 18,922,382 (+)NCBI
RefSeq Acc Id: XM_038611087   ⟹   XP_038467015
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0918,908,253 - 18,922,382 (+)NCBI
RefSeq Acc Id: XM_038629369   ⟹   XP_038485297
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha918,566,605 - 18,580,760 (+)NCBI
RefSeq Acc Id: XM_038629370   ⟹   XP_038485298
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha918,567,991 - 18,580,760 (+)NCBI
RefSeq Acc Id: XM_038629371   ⟹   XP_038485299
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha918,568,477 - 18,580,760 (+)NCBI
RefSeq Acc Id: XM_038629372   ⟹   XP_038485300
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha918,565,897 - 18,580,760 (+)NCBI
RefSeq Acc Id: XM_038629373   ⟹   XP_038485301
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha918,566,605 - 18,580,760 (+)NCBI
RefSeq Acc Id: XM_038676268   ⟹   XP_038532196
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,871,313 - 19,885,473 (+)NCBI
RefSeq Acc Id: XM_038676269   ⟹   XP_038532197
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,872,704 - 19,885,473 (+)NCBI
RefSeq Acc Id: XM_038676270   ⟹   XP_038532198
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,873,190 - 19,885,473 (+)NCBI
RefSeq Acc Id: XM_038676271   ⟹   XP_038532199
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,870,605 - 19,885,473 (+)NCBI
RefSeq Acc Id: XM_038676272   ⟹   XP_038532200
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0919,871,313 - 19,885,473 (+)NCBI
Reference Sequences
RefSeq Acc Id: ENSCAFP00000045646   ⟸   ENSCAFT00000079708
RefSeq Acc Id: ENSCAFP00000021044   ⟸   ENSCAFT00000022660
RefSeq Acc Id: XP_038341279   ⟸   XM_038485351
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038341276   ⟸   XM_038485348
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038341280   ⟸   XM_038485352
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038341277   ⟸   XM_038485349
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038341278   ⟸   XM_038485350
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467014   ⟸   XM_038611086
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467011   ⟸   XM_038611083
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467015   ⟸   XM_038611087
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038467012   ⟸   XM_038611084
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038467013   ⟸   XM_038611085
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038532199   ⟸   XM_038676271
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038532196   ⟸   XM_038676268
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038532200   ⟸   XM_038676272
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038532197   ⟸   XM_038676269
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038532198   ⟸   XM_038676270
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038485300   ⟸   XM_038629372
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038485297   ⟸   XM_038629369
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038485301   ⟸   XM_038629373
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038485298   ⟸   XM_038629370
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038485299   ⟸   XM_038629371
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038403046   ⟸   XM_038547118
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038403043   ⟸   XM_038547115
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038403047   ⟸   XM_038547119
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038403044   ⟸   XM_038547116
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038403045   ⟸   XM_038547117
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845012061   ⟸   ENSCAFT00845015527
RefSeq Acc Id: ENSCAFP00845011995   ⟸   ENSCAFT00845015445
RefSeq Acc Id: ENSCAFP00845012271   ⟸   ENSCAFT00845015780
RefSeq Acc Id: ENSCAFP00845012151   ⟸   ENSCAFT00845015631
RefSeq Acc Id: ENSCAFP00845012203   ⟸   ENSCAFT00845015691
Protein Domains
HMG box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014260 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845008774 Ensembl, ENTREZGENE
Ensembl Protein ENSCAFP00000021044 UniProtKB/TrEMBL
  ENSCAFP00000045646 UniProtKB/TrEMBL
  ENSCAFP00845012151 ENTREZGENE
  ENSCAFP00845012203 ENTREZGENE
Ensembl Transcript ENSCAFT00000022660 UniProtKB/TrEMBL
  ENSCAFT00000079708 UniProtKB/TrEMBL
  ENSCAFT00845015631 ENTREZGENE
  ENSCAFT00845015691 ENTREZGENE
Gene3D-CATH 1.10.30.10 UniProtKB/TrEMBL
InterPro HMG_box_5 UniProtKB/TrEMBL
  HMG_box_dom UniProtKB/TrEMBL
  HMG_box_dom_sf UniProtKB/TrEMBL
NCBI Gene UBTF ENTREZGENE
Pfam HMG_box UniProtKB/TrEMBL
  HMG_box_5 UniProtKB/TrEMBL
PROSITE HMG_BOX_2 UniProtKB/TrEMBL
SMART HMG UniProtKB/TrEMBL
Superfamily-SCOP SSF47095 UniProtKB/TrEMBL
UniProt A0A5F4BUV2_CANLF UniProtKB/TrEMBL
  E2RRM0_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:108184 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-02-06 UBTF  upstream binding transcription factor    upstream binding transcription factor, RNA polymerase I  Symbol and/or name change 5135510 APPROVED