OR10V5 (olfactory receptor family 10 subfamily V member 5) - Rat Genome Database

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Gene: OR10V5 (olfactory receptor family 10 subfamily V member 5) Canis lupus familiaris
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Symbol: OR10V5
Name: olfactory receptor family 10 subfamily V member 5
RGD ID: 12429518
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC483444; olfactory receptor 10V1; olfactory receptor 10V1-like
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11837,036,211 - 37,038,328 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1837,037,163 - 37,038,191 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1836,684,729 - 36,685,945 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01837,675,211 - 37,676,427 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11837,265,379 - 37,266,595 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01836,841,254 - 36,842,470 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01837,470,952 - 37,472,170 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Variants

.
Variants in OR10V5
36 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low
Below cutoff 2 5 7 2 2 1 5 5 7 3

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000039281   ⟹   ENSCAFP00000035108
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1837,037,163 - 37,038,191 (-)Ensembl
RefSeq Acc Id: XM_038423503   ⟹   XP_038279431
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01837,675,211 - 37,676,427 (-)NCBI
RefSeq Acc Id: XM_038501757   ⟹   XP_038357685
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11837,265,379 - 37,266,595 (-)NCBI
RefSeq Acc Id: XM_038562457   ⟹   XP_038418385
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01837,470,952 - 37,472,170 (-)NCBI
RefSeq Acc Id: XM_038626554   ⟹   XP_038482482
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01836,841,254 - 36,842,470 (-)NCBI
RefSeq Acc Id: XM_540562   ⟹   XP_540562
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11837,036,211 - 37,038,328 (-)NCBI
Dog10K_Boxer_Tasha1836,684,729 - 36,685,945 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: XP_540562   ⟸   XM_540562
- UniProtKB: A0A8P0SQM6 (UniProtKB/TrEMBL),   A0A8C0JLC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000035108   ⟸   ENSCAFT00000039281
RefSeq Acc Id: XP_038357685   ⟸   XM_038501757
RefSeq Acc Id: XP_038482482   ⟸   XM_038626554
RefSeq Acc Id: XP_038279431   ⟸   XM_038423503
- UniProtKB: A0A8I3NQA1 (UniProtKB/TrEMBL),   A0A8C0JLC2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038418385   ⟸   XM_038562457
- UniProtKB: A0A8C0JLC2 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007556 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00845016748 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000039281.4 UniProtKB/TrEMBL
  ENSCAFT00845029665 ENTREZGENE
  ENSCAFT00845029665.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
KEGG Report cfa:483444 UniProtKB/TrEMBL
NCBI Gene LOC483444 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0JLC2 ENTREZGENE
  A0A8I3NQA1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SQM6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:83922 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-11-26 OR10V5  olfactory receptor family 10 subfamily V member 5  LOC483444  olfactory receptor 10V1-like  Symbol and/or name change 5135510 APPROVED