TOGARAM1 (TOG array regulator of axonemal microtubules 1) - Rat Genome Database

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Gene: TOGARAM1 (TOG array regulator of axonemal microtubules 1) Canis lupus familiaris
Analyze
Symbol: TOGARAM1
Name: TOG array regulator of axonemal microtubules 1
RGD ID: 12426390
Description: ENCODES a protein that exhibits microtubule binding (inferred); INVOLVED IN cilium assembly (ortholog); positive regulation of microtubule polymerization (ortholog); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); Fanconi anemia (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); microtubule (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: crescerin-1; FAM179B; family with sequence similarity 179 member B; TOG array regulator of axonemal microtubules protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1822,420,718 - 22,499,435 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha822,238,609 - 22,317,222 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0822,579,751 - 22,658,466 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl822,579,900 - 22,658,450 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1822,242,209 - 22,320,885 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0822,308,456 - 22,387,315 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0822,644,576 - 22,723,197 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
TOGARAM1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1822,420,718 - 22,499,435 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha822,238,609 - 22,317,222 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0822,579,751 - 22,658,466 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl822,579,900 - 22,658,450 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1822,242,209 - 22,320,885 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0822,308,456 - 22,387,315 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0822,644,576 - 22,723,197 (+)NCBIUU_Cfam_GSD_1.0
TOGARAM1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381444,962,190 - 45,074,431 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1444,962,190 - 45,074,431 (+)EnsemblGRCh38hg38GRCh38
GRCh371445,431,393 - 45,543,634 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361444,501,166 - 44,613,384 (+)NCBINCBI36Build 36hg18NCBI36
Celera1425,292,672 - 25,404,888 (+)NCBICelera
Cytogenetic Map14q21.2NCBI
HuRef1425,542,156 - 25,654,306 (+)NCBIHuRef
CHM1_11445,369,592 - 45,481,800 (+)NCBICHM1_1
T2T-CHM13v2.01439,154,204 - 39,266,443 (+)NCBIT2T-CHM13v2.0
Togaram1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391265,012,350 - 65,069,347 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1265,012,578 - 65,069,347 (+)EnsemblGRCm39 Ensembl
GRCm381264,965,576 - 65,022,573 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1264,965,804 - 65,022,573 (+)EnsemblGRCm38mm10GRCm38
MGSCv371266,066,729 - 66,123,560 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361265,884,363 - 65,941,180 (+)NCBIMGSCv36mm8
Celera1266,095,803 - 66,152,226 (+)NCBICelera
Cytogenetic Map12C1NCBI
cM Map1227.21NCBI
Togaram1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8688,755,264 - 88,819,599 (+)NCBIGRCr8
mRatBN7.2683,019,025 - 83,083,343 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl683,018,859 - 83,082,807 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0686,713,588 - 86,780,134 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl686,713,604 - 86,780,147 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0696,204,872 - 96,269,113 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4686,315,331 - 86,380,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1686,318,500 - 86,382,884 (+)NCBI
Celera681,587,152 - 81,651,345 (+)NCBICelera
Cytogenetic Map6q24NCBI
Togaram1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540916,886,423 - 16,967,641 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540916,885,564 - 16,967,865 (-)NCBIChiLan1.0ChiLan1.0
TOGARAM1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21546,135,076 - 46,247,358 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11445,351,577 - 45,463,868 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01425,579,069 - 25,691,273 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11443,907,049 - 44,018,042 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1443,907,049 - 44,018,042 (+)Ensemblpanpan1.1panPan2
Togaram1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864054,389,991 - 54,475,059 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365834,213,847 - 4,298,945 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365834,213,853 - 4,298,916 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TOGARAM1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1175,198,385 - 175,275,159 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11175,198,172 - 175,274,309 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21194,997,640 - 195,142,629 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TOGARAM1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12422,078,938 - 22,195,923 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2422,078,158 - 22,195,917 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666116346,271 - 460,942 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Togaram1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473123,461,859 - 23,542,950 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473123,465,516 - 23,542,960 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in TOGARAM1
729 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 9 1
Low 5 5 19 6 6 6 6 6 3 7 10 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014115873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038483157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038544606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673527 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038673531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000022221   ⟹   ENSCAFP00000020635
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000073419   ⟹   ENSCAFP00000054492
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl822,420,937 - 22,497,671 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000077450   ⟹   ENSCAFP00000062424
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000082165   ⟹   ENSCAFP00000052746
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000088665   ⟹   ENSCAFP00000047866
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl822,420,584 - 22,497,671 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002607   ⟹   ENSCAFP00845002075
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl822,579,900 - 22,657,776 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002644   ⟹   ENSCAFP00845002099
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl822,579,900 - 22,657,776 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002681   ⟹   ENSCAFP00845002123
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl822,579,900 - 22,657,776 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002706   ⟹   ENSCAFP00845002142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl822,580,059 - 22,658,450 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845002749   ⟹   ENSCAFP00845002177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl822,580,059 - 22,658,450 (+)Ensembl
RefSeq Acc Id: XM_014115873   ⟹   XP_013971348
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,719 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,609 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115874   ⟹   XP_013971349
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,720 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,664 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115875   ⟹   XP_013971350
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,720 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,664 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115876   ⟹   XP_013971351
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,721 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,665 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115877   ⟹   XP_013971352
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,718 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,664 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014115878   ⟹   XP_013971353
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1822,420,722 - 22,499,435 (+)NCBI
Dog10K_Boxer_Tasha822,238,665 - 22,317,222 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038483152   ⟹   XP_038339080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,209 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038483153   ⟹   XP_038339081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,264 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038483154   ⟹   XP_038339082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,264 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038483155   ⟹   XP_038339083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,265 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038483156   ⟹   XP_038339084
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,264 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038483157   ⟹   XP_038339085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1822,242,265 - 22,320,885 (+)NCBI
RefSeq Acc Id: XM_038544601   ⟹   XP_038400529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,576 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038544602   ⟹   XP_038400530
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,631 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038544603   ⟹   XP_038400531
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,631 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038544604   ⟹   XP_038400532
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,632 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038544605   ⟹   XP_038400533
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,631 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038544606   ⟹   XP_038400534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0822,644,632 - 22,723,197 (+)NCBI
RefSeq Acc Id: XM_038608728   ⟹   XP_038464656
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,456 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038608729   ⟹   XP_038464657
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,511 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038608730   ⟹   XP_038464658
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,511 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038608731   ⟹   XP_038464659
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,512 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038608732   ⟹   XP_038464660
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,511 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038608733   ⟹   XP_038464661
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0822,308,512 - 22,387,315 (+)NCBI
RefSeq Acc Id: XM_038673526   ⟹   XP_038529454
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,751 - 22,658,466 (+)NCBI
RefSeq Acc Id: XM_038673527   ⟹   XP_038529455
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,806 - 22,658,466 (+)NCBI
RefSeq Acc Id: XM_038673528   ⟹   XP_038529456
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,806 - 22,658,466 (+)NCBI
RefSeq Acc Id: XM_038673529   ⟹   XP_038529457
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,807 - 22,658,466 (+)NCBI
RefSeq Acc Id: XM_038673530   ⟹   XP_038529458
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,806 - 22,658,466 (+)NCBI
RefSeq Acc Id: XM_038673531   ⟹   XP_038529459
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0822,579,807 - 22,658,466 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013971348 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971349 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971350 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971351 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971352 (Get FASTA)   NCBI Sequence Viewer  
  XP_013971353 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339081 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339083 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339084 (Get FASTA)   NCBI Sequence Viewer  
  XP_038339085 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400529 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400530 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400531 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400532 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400533 (Get FASTA)   NCBI Sequence Viewer  
  XP_038400534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464656 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464657 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464658 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464659 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464660 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464661 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529454 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529455 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529456 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529457 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529458 (Get FASTA)   NCBI Sequence Viewer  
  XP_038529459 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000020635.4
  ENSCAFP00000047866.2
  ENSCAFP00000052746.1
  ENSCAFP00000054492.1
  ENSCAFP00000062424.1
  ENSCAFP00030001874.1
  ENSCAFP00030001909.1
  ENSCAFP00030001962.1
  ENSCAFP00030002007.1
  ENSCAFP00040003110.1
  ENSCAFP00040003137.1
  ENSCAFP00040003164.1
  ENSCAFP00040003194.1
  ENSCAFP00845002075
  ENSCAFP00845002075.1
  ENSCAFP00845002099.1
  ENSCAFP00845002123.1
  ENSCAFP00845002142
  ENSCAFP00845002142.1
  ENSCAFP00845002177.1
RefSeq Acc Id: XP_013971348   ⟸   XM_014115873
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013971351   ⟸   XM_014115876
- Peptide Label: isoform X4
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013971352   ⟸   XM_014115877
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PSW0 (UniProtKB/TrEMBL),   A0A8I3ML26 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013971349   ⟸   XM_014115874
- Peptide Label: isoform X2
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013971350   ⟸   XM_014115875
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LG99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013971353   ⟸   XM_014115878
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LZK1 (UniProtKB/TrEMBL),   A0A8I3MKB0 (UniProtKB/TrEMBL),   A0A8C0LG99 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000047866   ⟸   ENSCAFT00000088665
RefSeq Acc Id: ENSCAFP00000062424   ⟸   ENSCAFT00000077450
RefSeq Acc Id: ENSCAFP00000054492   ⟸   ENSCAFT00000073419
RefSeq Acc Id: ENSCAFP00000052746   ⟸   ENSCAFT00000082165
RefSeq Acc Id: ENSCAFP00000020635   ⟸   ENSCAFT00000022221
RefSeq Acc Id: XP_038339080   ⟸   XM_038483152
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038339084   ⟸   XM_038483156
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038339081   ⟸   XM_038483153
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038339082   ⟸   XM_038483154
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038339083   ⟸   XM_038483155
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038339085   ⟸   XM_038483157
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038464656   ⟸   XM_038608728
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038464660   ⟸   XM_038608732
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038464657   ⟸   XM_038608729
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038464658   ⟸   XM_038608730
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038464659   ⟸   XM_038608731
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038464661   ⟸   XM_038608733
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038529454   ⟸   XM_038673526
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529458   ⟸   XM_038673530
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PSW0 (UniProtKB/TrEMBL),   A0A8I3ML26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529455   ⟸   XM_038673527
- Peptide Label: isoform X2
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529456   ⟸   XM_038673528
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LG99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529457   ⟸   XM_038673529
- Peptide Label: isoform X4
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038529459   ⟸   XM_038673531
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LZK1 (UniProtKB/TrEMBL),   A0A8I3MKB0 (UniProtKB/TrEMBL),   A0A8C0LG99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400529   ⟸   XM_038544601
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400533   ⟸   XM_038544605
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PSW0 (UniProtKB/TrEMBL),   A0A8I3ML26 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400530   ⟸   XM_038544602
- Peptide Label: isoform X2
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400531   ⟸   XM_038544603
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LG99 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400532   ⟸   XM_038544604
- Peptide Label: isoform X4
- UniProtKB: A0A8C0M1C2 (UniProtKB/TrEMBL),   A0A8I3MHV1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038400534   ⟸   XM_038544606
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LG99 (UniProtKB/TrEMBL),   A0A8C0LZK1 (UniProtKB/TrEMBL),   A0A8I3MKB0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845002123   ⟸   ENSCAFT00845002681
RefSeq Acc Id: ENSCAFP00845002142   ⟸   ENSCAFT00845002706
RefSeq Acc Id: ENSCAFP00845002099   ⟸   ENSCAFT00845002644
RefSeq Acc Id: ENSCAFP00845002075   ⟸   ENSCAFT00845002607
RefSeq Acc Id: ENSCAFP00845002177   ⟸   ENSCAFT00845002749
Protein Domains
TOG


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014001 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030001222 UniProtKB/TrEMBL
  ENSCAFG00040001911 UniProtKB/TrEMBL
  ENSCAFG00845001513 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000022221.5 UniProtKB/TrEMBL
  ENSCAFT00000073419.2 UniProtKB/TrEMBL
  ENSCAFT00000077450.2 UniProtKB/TrEMBL
  ENSCAFT00000082165.2 UniProtKB/TrEMBL
  ENSCAFT00000088665.2 UniProtKB/TrEMBL
  ENSCAFT00030002123.1 UniProtKB/TrEMBL
  ENSCAFT00030002160.1 UniProtKB/TrEMBL
  ENSCAFT00030002218.1 UniProtKB/TrEMBL
  ENSCAFT00030002267.1 UniProtKB/TrEMBL
  ENSCAFT00040003628.1 UniProtKB/TrEMBL
  ENSCAFT00040003658.1 UniProtKB/TrEMBL
  ENSCAFT00040003688.1 UniProtKB/TrEMBL
  ENSCAFT00040003719.1 UniProtKB/TrEMBL
  ENSCAFT00845002607 ENTREZGENE
  ENSCAFT00845002607.1 UniProtKB/TrEMBL
  ENSCAFT00845002644.1 UniProtKB/TrEMBL
  ENSCAFT00845002681.1 UniProtKB/TrEMBL
  ENSCAFT00845002706 ENTREZGENE
  ENSCAFT00845002706.1 UniProtKB/TrEMBL
  ENSCAFT00845002749.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  TOG UniProtKB/TrEMBL
NCBI Gene TOGARAM1 ENTREZGENE
PANTHER CLASP UniProtKB/TrEMBL
  PTHR21567:SF6 UniProtKB/TrEMBL
Pfam CEP104-like_TOG UniProtKB/TrEMBL
SMART TOG UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A8C0LG99 ENTREZGENE
  A0A8C0LZK1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M1C2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M4D7_CANLF UniProtKB/TrEMBL
  A0A8C0PSW0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PYG1_CANLF UniProtKB/TrEMBL
  A0A8I3MGC3_CANLF UniProtKB/TrEMBL
  A0A8I3MHV1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MKB0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MKQ2_CANLF UniProtKB/TrEMBL
  A0A8I3ML26 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NXW2_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:47705 ENTREZGENE