CTIF (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 7 | 79,780,645 - 79,998,207 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 7 | 79,593,622 - 79,988,409 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 7 | 79,187,287 - 79,465,629 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 7 | 79,850,586 - 80,129,031 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 7 | 79,847,086 - 80,129,149 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 7 | 79,564,029 - 79,842,265 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 7 | 79,594,599 - 79,872,494 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 7 | 79,880,306 - 80,159,011 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
CTIF (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 18 | 48,539,031 - 48,863,217 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 18 | 48,539,031 - 48,863,217 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 18 | 46,065,402 - 46,389,588 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 18 | 44,319,425 - 44,643,582 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 18 | 44,319,424 - 44,643,582 | NCBI | | | | | Celera | 18 | 42,914,746 - 43,243,180 (+) | NCBI | | Celera | | | Cytogenetic Map | 18 | q21.1 | NCBI | | | | | HuRef | 18 | 42,914,222 - 43,242,739 (+) | NCBI | | HuRef | | | CHM1_1 | 18 | 46,060,074 - 46,384,236 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 18 | 48,730,230 - 49,058,523 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ctif (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 18 | 75,564,279 - 75,830,762 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 18 | 75,564,295 - 75,830,625 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 18 | 75,431,205 - 75,697,696 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 18 | 75,431,224 - 75,697,554 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 18 | 75,590,859 - 75,857,350 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 18 | 75,556,570 - 75,822,919 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 18 | 76,665,863 - 76,938,098 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | E3 | NCBI | | | | | cM Map | 18 | 51.06 | NCBI | | | | |
|
Ctif (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 18 | 71,331,222 - 71,602,493 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 18 | 69,056,151 - 69,327,454 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 18 | 69,059,519 - 69,327,385 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 18 | 71,162,650 - 71,434,191 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 18 | 71,832,687 - 72,103,904 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 18 | 69,688,678 - 69,959,921 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 18 | 71,467,381 - 71,701,423 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 18 | 71,463,486 - 71,829,881 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 18 | 70,602,149 - 70,834,596 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 18 | 72,366,505 - 72,458,414 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 18 | 72,439,430 - 72,657,616 (-) | NCBI | | | | | Celera | 18 | 67,226,619 - 67,314,620 (-) | NCBI | | Celera | | | Cytogenetic Map | 18 | q12.2 | NCBI | | | | |
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Ctif (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955402 | 33,706,788 - 33,987,583 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955402 | 33,706,824 - 33,986,476 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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CTIF (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 17 | 66,071,128 - 66,399,718 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 18 | 51,763,733 - 52,091,168 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 18 | 41,923,292 - 42,251,321 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 18 | 45,278,297 - 45,604,635 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 18 | 45,358,282 - 45,604,625 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Ctif (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024404944 | 38,728,250 - 38,993,382 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936497 | 13,967,245 - 14,232,872 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936497 | 13,967,290 - 14,232,409 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
CTIF (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 1 | 98,133,342 - 98,456,433 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 98,133,313 - 98,455,130 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 107,666,564 - 108,030,875 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
CTIF (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 18 | 32,080,042 - 32,409,356 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 18 | 32,083,646 - 32,328,946 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 6,314,797 - 6,645,594 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ctif (Heterocephalus glaber - naked mole-rat) |
|