CTIF (cap binding complex dependent translation initiation factor) - Rat Genome Database

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Gene: CTIF (cap binding complex dependent translation initiation factor) Canis lupus familiaris
Analyze
Symbol: CTIF
Name: cap binding complex dependent translation initiation factor
RGD ID: 12426366
Description: ENCODES a protein that exhibits RNA binding (inferred); translation activator activity (inferred); INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (inferred); regulation of translational initiation (inferred); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (inferred); perinuclear region of cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CBP80/20-dependent translation initiation factor
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1779,780,645 - 79,998,207 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha779,187,287 - 79,465,629 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0779,850,586 - 80,129,031 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl779,847,086 - 80,129,149 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1779,564,029 - 79,842,265 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0779,594,599 - 79,872,494 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0779,880,306 - 80,159,011 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
CTIF
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1779,780,645 - 79,998,207 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha779,187,287 - 79,465,629 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0779,850,586 - 80,129,031 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl779,847,086 - 80,129,149 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1779,564,029 - 79,842,265 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0779,594,599 - 79,872,494 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0779,880,306 - 80,159,011 (-)NCBIUU_Cfam_GSD_1.0
CTIF
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381848,539,031 - 48,863,217 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1848,539,031 - 48,863,217 (+)EnsemblGRCh38hg38GRCh38
GRCh371846,065,402 - 46,389,588 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361844,319,425 - 44,643,582 (+)NCBINCBI36Build 36hg18NCBI36
Build 341844,319,424 - 44,643,582NCBI
Celera1842,914,746 - 43,243,180 (+)NCBICelera
Cytogenetic Map18q21.1NCBI
HuRef1842,914,222 - 43,242,739 (+)NCBIHuRef
CHM1_11846,060,074 - 46,384,236 (+)NCBICHM1_1
T2T-CHM13v2.01848,730,230 - 49,058,523 (+)NCBIT2T-CHM13v2.0
Ctif
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391875,564,279 - 75,830,762 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1875,564,295 - 75,830,625 (-)EnsemblGRCm39 Ensembl
GRCm381875,431,205 - 75,697,696 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1875,431,224 - 75,697,554 (-)EnsemblGRCm38mm10GRCm38
MGSCv371875,590,859 - 75,857,350 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361875,556,570 - 75,822,919 (-)NCBIMGSCv36mm8
Celera1876,665,863 - 76,938,098 (-)NCBICelera
Cytogenetic Map18E3NCBI
cM Map1851.06NCBI
Ctif
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81871,331,222 - 71,602,493 (-)NCBIGRCr8
mRatBN7.21869,056,151 - 69,327,454 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1869,059,519 - 69,327,385 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1871,162,650 - 71,434,191 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01871,832,687 - 72,103,904 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01869,688,678 - 69,959,921 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01871,467,381 - 71,701,423 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1871,463,486 - 71,829,881 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01870,602,149 - 70,834,596 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41872,366,505 - 72,458,414 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11872,439,430 - 72,657,616 (-)NCBI
Celera1867,226,619 - 67,314,620 (-)NCBICelera
Cytogenetic Map18q12.2NCBI
Ctif
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540233,706,788 - 33,987,583 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540233,706,824 - 33,986,476 (+)NCBIChiLan1.0ChiLan1.0
CTIF
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21766,071,128 - 66,399,718 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11851,763,733 - 52,091,168 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01841,923,292 - 42,251,321 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11845,278,297 - 45,604,635 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1845,358,282 - 45,604,625 (+)Ensemblpanpan1.1panPan2
Ctif
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494438,728,250 - 38,993,382 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493649713,967,245 - 14,232,872 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493649713,967,290 - 14,232,409 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CTIF
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl198,133,342 - 98,456,433 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1198,133,313 - 98,455,130 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21107,666,564 - 108,030,875 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CTIF
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11832,080,042 - 32,409,356 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1832,083,646 - 32,328,946 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660506,314,797 - 6,645,594 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ctif
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477812,085,702 - 12,371,721 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477812,085,856 - 12,371,623 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CTIF
4252 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 1 17 3 3 12 8 4
Low 2 4 5 3 6 3 6 6 8 2 2
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005623132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005623134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014115611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482528 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482530 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482531 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482532 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038482536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038543993 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579249 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579251 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579255 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608095 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038608101 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672805 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672806 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038672809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_547693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000093 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000030290   ⟹   ENSCAFP00000028142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000065637   ⟹   ENSCAFP00000053300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000065974   ⟹   ENSCAFP00000057457
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000081689   ⟹   ENSCAFP00000053508
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000084380   ⟹   ENSCAFP00000059968
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl779,593,622 - 79,988,409 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030460   ⟹   ENSCAFP00845023892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl779,847,086 - 80,129,015 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030541   ⟹   ENSCAFP00845023959
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl779,847,086 - 80,129,015 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030637   ⟹   ENSCAFP00845024039
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl779,847,086 - 80,058,013 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845030954   ⟹   ENSCAFP00845024255
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl779,847,089 - 80,129,149 (-)Ensembl
RefSeq Acc Id: XM_038482528   ⟹   XP_038338456
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,265 (-)NCBI
RefSeq Acc Id: XM_038482530   ⟹   XP_038338458
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,841,240 (-)NCBI
RefSeq Acc Id: XM_038482531   ⟹   XP_038338459
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,841,625 (-)NCBI
RefSeq Acc Id: XM_038482532   ⟹   XP_038338460
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,265 (-)NCBI
RefSeq Acc Id: XM_038482533   ⟹   XP_038338461
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,264 (-)NCBI
RefSeq Acc Id: XM_038482534   ⟹   XP_038338462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,264 (-)NCBI
RefSeq Acc Id: XM_038482535   ⟹   XP_038338463
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,265 (-)NCBI
RefSeq Acc Id: XM_038482536   ⟹   XP_038338464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1779,564,029 - 79,842,264 (-)NCBI
RefSeq Acc Id: XM_038543993   ⟹   XP_038399921
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0779,880,306 - 80,159,011 (-)NCBI
RefSeq Acc Id: XM_038579243   ⟹   XP_038435171
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,629 (-)NCBI
RefSeq Acc Id: XM_038579245   ⟹   XP_038435173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,464,606 (-)NCBI
RefSeq Acc Id: XM_038579248   ⟹   XP_038435176
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,464,987 (-)NCBI
RefSeq Acc Id: XM_038579249   ⟹   XP_038435177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,629 (-)NCBI
RefSeq Acc Id: XM_038579251   ⟹   XP_038435179
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,628 (-)NCBI
RefSeq Acc Id: XM_038579255   ⟹   XP_038435183
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,628 (-)NCBI
RefSeq Acc Id: XM_038579258   ⟹   XP_038435186
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,629 (-)NCBI
RefSeq Acc Id: XM_038579259   ⟹   XP_038435187
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha779,187,287 - 79,465,628 (-)NCBI
RefSeq Acc Id: XM_038608094   ⟹   XP_038464022
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,494 (-)NCBI
RefSeq Acc Id: XM_038608095   ⟹   XP_038464023
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,871,468 (-)NCBI
RefSeq Acc Id: XM_038608096   ⟹   XP_038464024
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,871,852 (-)NCBI
RefSeq Acc Id: XM_038608097   ⟹   XP_038464025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,494 (-)NCBI
RefSeq Acc Id: XM_038608098   ⟹   XP_038464026
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,493 (-)NCBI
RefSeq Acc Id: XM_038608099   ⟹   XP_038464027
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,493 (-)NCBI
RefSeq Acc Id: XM_038608100   ⟹   XP_038464028
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,494 (-)NCBI
RefSeq Acc Id: XM_038608101   ⟹   XP_038464029
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0779,594,599 - 79,872,493 (-)NCBI
RefSeq Acc Id: XM_038672802   ⟹   XP_038528730
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,031 (-)NCBI
RefSeq Acc Id: XM_038672803   ⟹   XP_038528731
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,127,998 (-)NCBI
RefSeq Acc Id: XM_038672804   ⟹   XP_038528732
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,128,383 (-)NCBI
RefSeq Acc Id: XM_038672805   ⟹   XP_038528733
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,031 (-)NCBI
RefSeq Acc Id: XM_038672806   ⟹   XP_038528734
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,030 (-)NCBI
RefSeq Acc Id: XM_038672807   ⟹   XP_038528735
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,030 (-)NCBI
RefSeq Acc Id: XM_038672808   ⟹   XP_038528736
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,031 (-)NCBI
RefSeq Acc Id: XM_038672809   ⟹   XP_038528737
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0779,850,586 - 80,129,030 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038338456 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338458 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338459 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338460 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338461 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338462 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338463 (Get FASTA)   NCBI Sequence Viewer  
  XP_038338464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038399921 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435171 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435173 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435176 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435177 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435179 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435183 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435186 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435187 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464022 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464023 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464024 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464025 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464026 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464027 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464028 (Get FASTA)   NCBI Sequence Viewer  
  XP_038464029 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528730 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528731 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528732 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528733 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528734 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528735 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528736 (Get FASTA)   NCBI Sequence Viewer  
  XP_038528737 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000028142.3
  ENSCAFP00000053300.1
  ENSCAFP00000057457.1
  ENSCAFP00000059968.1
  ENSCAFP00030002409.1
  ENSCAFP00030002420.1
  ENSCAFP00030002444.1
  ENSCAFP00030002477.1
  ENSCAFP00030002499.1
  ENSCAFP00030002524.1
  ENSCAFP00040023522.1
  ENSCAFP00040023596.1
  ENSCAFP00040023692.1
  ENSCAFP00845023892
  ENSCAFP00845023892.1
  ENSCAFP00845023959
  ENSCAFP00845023959.1
  ENSCAFP00845024039
  ENSCAFP00845024039.1
  ENSCAFP00845024255
  ENSCAFP00845024255.1
RefSeq Acc Id: ENSCAFP00000028142   ⟸   ENSCAFT00000030290
RefSeq Acc Id: ENSCAFP00000059968   ⟸   ENSCAFT00000084380
RefSeq Acc Id: ENSCAFP00000053300   ⟸   ENSCAFT00000065637
RefSeq Acc Id: ENSCAFP00000057457   ⟸   ENSCAFT00000065974
RefSeq Acc Id: ENSCAFP00000053508   ⟸   ENSCAFT00000081689
RefSeq Acc Id: XP_038338463   ⟸   XM_038482535
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038338460   ⟸   XM_038482532
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038338456   ⟸   XM_038482528
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038338464   ⟸   XM_038482536
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038338462   ⟸   XM_038482534
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038338461   ⟸   XM_038482533
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038338459   ⟸   XM_038482531
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038338458   ⟸   XM_038482530
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038464028   ⟸   XM_038608100
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038464025   ⟸   XM_038608097
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038464022   ⟸   XM_038608094
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038464029   ⟸   XM_038608101
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038464027   ⟸   XM_038608099
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038464026   ⟸   XM_038608098
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038464024   ⟸   XM_038608096
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038464023   ⟸   XM_038608095
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038528736   ⟸   XM_038672808
- Peptide Label: isoform X5
- UniProtKB: A0A8I3P1Z8 (UniProtKB/TrEMBL),   A0A8P0TC01 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528733   ⟸   XM_038672805
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528730   ⟸   XM_038672802
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528737   ⟸   XM_038672809
- Peptide Label: isoform X6
- UniProtKB: A0A8C0SM38 (UniProtKB/TrEMBL),   A0A8I3P249 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528735   ⟸   XM_038672807
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528734   ⟸   XM_038672806
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZ29 (UniProtKB/TrEMBL),   A0A8I3NXS3 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528732   ⟸   XM_038672804
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038528731   ⟸   XM_038672803
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435186   ⟸   XM_038579258
- Peptide Label: isoform X5
- UniProtKB: A0A8I3P1Z8 (UniProtKB/TrEMBL),   A0A8P0TC01 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435177   ⟸   XM_038579249
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435171   ⟸   XM_038579243
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435187   ⟸   XM_038579259
- Peptide Label: isoform X6
- UniProtKB: A0A8C0SM38 (UniProtKB/TrEMBL),   A0A8I3P249 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435183   ⟸   XM_038579255
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435179   ⟸   XM_038579251
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LZ29 (UniProtKB/TrEMBL),   A0A8I3NXS3 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435176   ⟸   XM_038579248
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435173   ⟸   XM_038579245
- Peptide Label: isoform X1
- UniProtKB: A0A8C0M0V0 (UniProtKB/TrEMBL),   A0A8I3NZA5 (UniProtKB/TrEMBL),   A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038399921   ⟸   XM_038543993
- Peptide Label: isoform X4
- UniProtKB: A0A8C0RAC6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845023892   ⟸   ENSCAFT00845030460
RefSeq Acc Id: ENSCAFP00845023959   ⟸   ENSCAFT00845030541
RefSeq Acc Id: ENSCAFP00845024039   ⟸   ENSCAFT00845030637
RefSeq Acc Id: ENSCAFP00845024255   ⟸   ENSCAFT00845030954
Protein Domains
MIF4G


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019076 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030001497 UniProtKB/TrEMBL
  ENSCAFG00040014677 UniProtKB/TrEMBL
  ENSCAFG00845017217 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030290.5 UniProtKB/TrEMBL
  ENSCAFT00000065637.2 UniProtKB/TrEMBL
  ENSCAFT00000065974.2 UniProtKB/TrEMBL
  ENSCAFT00000084380.2 UniProtKB/TrEMBL
  ENSCAFT00030002701.1 UniProtKB/TrEMBL
  ENSCAFT00030002714.1 UniProtKB/TrEMBL
  ENSCAFT00030002741.1 UniProtKB/TrEMBL
  ENSCAFT00030002782.1 UniProtKB/TrEMBL
  ENSCAFT00030002809.1 UniProtKB/TrEMBL
  ENSCAFT00030002842.1 UniProtKB/TrEMBL
  ENSCAFT00040027064.1 UniProtKB/TrEMBL
  ENSCAFT00040027152.1 UniProtKB/TrEMBL
  ENSCAFT00040027262.1 UniProtKB/TrEMBL
  ENSCAFT00845030460 ENTREZGENE
  ENSCAFT00845030460.1 UniProtKB/TrEMBL
  ENSCAFT00845030541 ENTREZGENE
  ENSCAFT00845030541.1 UniProtKB/TrEMBL
  ENSCAFT00845030637 ENTREZGENE
  ENSCAFT00845030637.1 UniProtKB/TrEMBL
  ENSCAFT00845030954 ENTREZGENE
  ENSCAFT00845030954.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.40.180 UniProtKB/TrEMBL
InterPro ARM-type_fold UniProtKB/TrEMBL
  MIF4G-like_typ-3 UniProtKB/TrEMBL
NCBI Gene CTIF ENTREZGENE
PANTHER CBP80/20-DEPENDENT TRANSLATION INITIATION FACTOR UniProtKB/TrEMBL
  EIF4G DOMAIN PROTEIN UniProtKB/TrEMBL
Pfam MIF4G UniProtKB/TrEMBL
SMART MIF4G UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A8C0LVN5_CANLF UniProtKB/TrEMBL
  A0A8C0LZ29 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M0V0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0M122_CANLF UniProtKB/TrEMBL
  A0A8C0RAC6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SM38 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NXS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NZA5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P1Z8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P249 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TC01 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:39698 ENTREZGENE