ZNF662 (zinc finger protein 662) - Rat Genome Database

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Gene: ZNF662 (zinc finger protein 662) Canis lupus familiaris
Analyze
Symbol: ZNF662
Name: zinc finger protein 662
RGD ID: 12421831
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); metal ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferred); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); genetic disease (ortholog); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Bonobo
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12311,979,768 - 11,994,226 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2311,979,740 - 11,986,393 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2311,945,052 - 11,967,554 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02312,260,912 - 12,283,423 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2312,215,716 - 12,276,770 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12312,062,880 - 12,085,379 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02312,205,059 - 12,224,732 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02312,217,356 - 12,224,436 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
nucleus  (IEA)

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ZNF662
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12311,979,768 - 11,994,226 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2311,979,740 - 11,986,393 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2311,945,052 - 11,967,554 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02312,260,912 - 12,283,423 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2312,215,716 - 12,276,770 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12312,062,880 - 12,085,379 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02312,205,059 - 12,224,732 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02312,217,356 - 12,224,436 (+)NCBIUU_Cfam_GSD_1.0
ZNF662
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38342,906,142 - 42,919,334 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl342,906,142 - 42,919,334 (+)EnsemblGRCh38hg38GRCh38
GRCh37342,947,634 - 42,960,826 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36342,922,406 - 42,934,136 (+)NCBINCBI36Build 36hg18NCBI36
Celera342,885,293 - 42,898,663 (+)NCBICelera
Cytogenetic Map3p22.1NCBI
HuRef342,990,828 - 43,004,283 (+)NCBIHuRef
CHM1_1342,897,398 - 42,910,771 (+)NCBICHM1_1
T2T-CHM13v2.0342,921,723 - 42,934,975 (+)NCBIT2T-CHM13v2.0
ZNF662
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2242,863,375 - 42,880,228 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1342,870,900 - 42,884,990 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0342,809,150 - 42,823,194 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1343,871,977 - 43,883,719 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl343,872,164 - 43,883,699 (+)Ensemblpanpan1.1panPan2
Znf662
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118199,878,264 - 199,895,869 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366952,240,520 - 2,247,742 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF662
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1326,342,004 - 26,352,548 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11326,309,983 - 26,352,554 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21328,978,199 - 29,015,710 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF662
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1224,358,215 - 4,365,977 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl224,358,715 - 4,367,759 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041162,831,042 - 162,841,824 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in ZNF662
246 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 8 11 7 1
Low 4 5 14 6 6 6 6 6 1 8 3 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005634317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005634320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005634321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005634322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014106735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432061 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038432066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038457455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038457456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038457457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038507373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038570606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634791 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038634795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000008650   ⟹   ENSCAFP00000008017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2311,979,740 - 11,986,393 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000070958   ⟹   ENSCAFP00000050735
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2311,981,364 - 11,986,393 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000082340   ⟹   ENSCAFP00000054052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2311,979,975 - 11,986,393 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845037339   ⟹   ENSCAFP00845029249
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2312,215,716 - 12,276,770 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845037413   ⟹   ENSCAFP00845029307
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2312,269,414 - 12,276,071 (+)Ensembl
RefSeq Acc Id: XM_005634317   ⟹   XP_005634374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12311,979,886 - 11,994,226 (+)NCBI
Dog10K_Boxer_Tasha2311,953,694 - 11,967,554 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005634321   ⟹   XP_005634378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12311,980,002 - 11,994,226 (+)NCBI
Dog10K_Boxer_Tasha2311,953,854 - 11,967,554 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005634322   ⟹   XP_005634379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12311,979,768 - 11,994,226 (+)NCBI
Dog10K_Boxer_Tasha2311,953,626 - 11,967,554 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038432061   ⟹   XP_038287989
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,269,554 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038432062   ⟹   XP_038287990
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,269,714 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038432063   ⟹   XP_038287991
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,269,486 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038432064   ⟹   XP_038287992
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,260,912 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038432065   ⟹   XP_038287993
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,261,085 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038432066   ⟹   XP_038287994
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02312,269,715 - 12,283,423 (+)NCBI
RefSeq Acc Id: XM_038457455   ⟹   XP_038313383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2311,945,227 - 11,967,554 (+)NCBI
RefSeq Acc Id: XM_038457456   ⟹   XP_038313384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2311,945,052 - 11,967,554 (+)NCBI
RefSeq Acc Id: XM_038457457   ⟹   XP_038313385
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2311,953,855 - 11,967,554 (+)NCBI
RefSeq Acc Id: XM_038507368   ⟹   XP_038363296
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,071,512 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038507369   ⟹   XP_038363297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,071,672 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038507370   ⟹   XP_038363298
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,071,444 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038507371   ⟹   XP_038363299
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,062,880 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038507372   ⟹   XP_038363300
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,063,048 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038507373   ⟹   XP_038363301
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12312,071,673 - 12,085,379 (+)NCBI
RefSeq Acc Id: XM_038570606   ⟹   XP_038426534
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02312,217,356 - 12,224,436 (+)NCBI
RefSeq Acc Id: XM_038634790   ⟹   XP_038490718
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,213,708 - 12,224,732 (+)NCBI
RefSeq Acc Id: XM_038634791   ⟹   XP_038490719
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,213,868 - 12,224,732 (+)NCBI
RefSeq Acc Id: XM_038634792   ⟹   XP_038490720
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,213,639 - 12,224,732 (+)NCBI
RefSeq Acc Id: XM_038634793   ⟹   XP_038490721
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,205,059 - 12,224,732 (+)NCBI
RefSeq Acc Id: XM_038634794   ⟹   XP_038490722
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,205,241 - 12,224,732 (+)NCBI
RefSeq Acc Id: XM_038634795   ⟹   XP_038490723
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02312,213,869 - 12,224,732 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005634374 (Get FASTA)   NCBI Sequence Viewer  
  XP_005634378 (Get FASTA)   NCBI Sequence Viewer  
  XP_005634379 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287989 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287990 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287991 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287992 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287993 (Get FASTA)   NCBI Sequence Viewer  
  XP_038287994 (Get FASTA)   NCBI Sequence Viewer  
  XP_038313383 (Get FASTA)   NCBI Sequence Viewer  
  XP_038313384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038313385 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363296 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363297 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363298 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363299 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363300 (Get FASTA)   NCBI Sequence Viewer  
  XP_038363301 (Get FASTA)   NCBI Sequence Viewer  
  XP_038426534 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490718 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490719 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490720 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490721 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490722 (Get FASTA)   NCBI Sequence Viewer  
  XP_038490723 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000008017.4
  ENSCAFP00000054052.2
  ENSCAFP00030026139.1
  ENSCAFP00040026979.1
  ENSCAFP00040027040.1
  ENSCAFP00845029249
  ENSCAFP00845029249.1
  ENSCAFP00845029307.1
Reference Protein Sequences
RefSeq Acc Id: XP_005634379   ⟸   XM_005634322
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_005634374   ⟸   XM_005634317
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_005634378   ⟸   XM_005634321
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSCAFP00000050735   ⟸   ENSCAFT00000070958
RefSeq Acc Id: ENSCAFP00000008017   ⟸   ENSCAFT00000008650
RefSeq Acc Id: ENSCAFP00000054052   ⟸   ENSCAFT00000082340
RefSeq Acc Id: XP_038363299   ⟸   XM_038507371
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038363300   ⟸   XM_038507372
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038363298   ⟸   XM_038507370
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038363296   ⟸   XM_038507368
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038363297   ⟸   XM_038507369
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038363301   ⟸   XM_038507373
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038490721   ⟸   XM_038634793
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038490722   ⟸   XM_038634794
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038490720   ⟸   XM_038634792
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038490718   ⟸   XM_038634790
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038490719   ⟸   XM_038634791
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038490723   ⟸   XM_038634795
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038287992   ⟸   XM_038432064
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SWE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038287993   ⟸   XM_038432065
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SWE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038287991   ⟸   XM_038432063
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SWE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038287989   ⟸   XM_038432061
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038287990   ⟸   XM_038432062
- Peptide Label: isoform X2
- UniProtKB: A0A8C0SWE0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038287994   ⟸   XM_038432066
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038313384   ⟸   XM_038457456
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038313383   ⟸   XM_038457455
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038313385   ⟸   XM_038457457
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LKP3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038426534   ⟸   XM_038570606
- Peptide Label: isoform X2
RefSeq Acc Id: ENSCAFP00845029249   ⟸   ENSCAFT00845037339
RefSeq Acc Id: ENSCAFP00845029307   ⟸   ENSCAFT00845037413
Protein Domains
C2H2-type   KRAB

Promoters
RGD ID:13687414
Promoter ID:EPDNEW_C5483
Type:single initiation site
Name:ZNF662_1
Description:zinc finger protein 662
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12311,979,804 - 11,979,864EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000005374 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030016258 UniProtKB/TrEMBL
  ENSCAFG00040016807 UniProtKB/TrEMBL
  ENSCAFG00845021144 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008650.5 UniProtKB/TrEMBL
  ENSCAFT00000082340.2 UniProtKB/TrEMBL
  ENSCAFT00030029984.1 UniProtKB/TrEMBL
  ENSCAFT00040031038.1 UniProtKB/TrEMBL
  ENSCAFT00040031103.1 UniProtKB/TrEMBL
  ENSCAFT00845037339 ENTREZGENE
  ENSCAFT00845037339.1 UniProtKB/TrEMBL
  ENSCAFT00845037413.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene ZNF662 ENTREZGENE
PANTHER GENE 10130-RELATED UniProtKB/TrEMBL
  KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  ZINC FINGER AND SCAN DOMAIN-CONTAINING UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 46 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 747 UniProtKB/TrEMBL
  ZNF44 PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A8C0LKP3 ENTREZGENE
  A0A8C0NGA2_CANLF UniProtKB/TrEMBL
  A0A8C0SW89_CANLF UniProtKB/TrEMBL
  A0A8C0SWE0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PC78_CANLF UniProtKB/TrEMBL
  A0A8I3PER8_CANLF UniProtKB/TrEMBL
  A0A8P0P3K9_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0SAY5 UniProtKB/TrEMBL
VGNC ID VGNC:55024 ENTREZGENE