FRMPD1 (FERM and PDZ domain containing 1) - Rat Genome Database

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Gene: FRMPD1 (FERM and PDZ domain containing 1) Canis lupus familiaris
Analyze
Symbol: FRMPD1
Name: FERM and PDZ domain containing 1
RGD ID: 12421002
Description: INVOLVED IN establishment of protein localization to membrane (inferred); regulation of G protein-coupled receptor signaling pathway (inferred); ASSOCIATED WITH acromesomelic dysplasia, Maroteaux type (ortholog); distal arthrogryposis type 1A (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FERM and PDZ domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11153,901,625 - 54,051,885 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1153,939,807 - 54,051,756 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1152,402,723 - 52,477,822 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01155,010,993 - 55,161,059 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1155,021,901 - 55,161,057 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11153,509,177 - 53,659,218 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01153,538,813 - 53,688,852 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01154,234,835 - 54,385,113 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074  


Genomics

Comparative Map Data
FRMPD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11153,901,625 - 54,051,885 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1153,939,807 - 54,051,756 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1152,402,723 - 52,477,822 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01155,010,993 - 55,161,059 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1155,021,901 - 55,161,057 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11153,509,177 - 53,659,218 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01153,538,813 - 53,688,852 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01154,234,835 - 54,385,113 (+)NCBIUU_Cfam_GSD_1.0
FRMPD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38937,603,229 - 37,746,904 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl937,650,954 - 37,746,904 (+)EnsemblGRCh38hg38GRCh38
GRCh37937,603,226 - 37,746,901 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36937,641,052 - 37,736,901 (+)NCBINCBI36Build 36hg18NCBI36
Build 34937,641,051 - 37,736,901NCBI
Celera937,584,272 - 37,680,095 (+)NCBICelera
Cytogenetic Map9p13.2NCBI
HuRef937,603,099 - 37,698,949 (+)NCBIHuRef
CHM1_1937,652,768 - 37,748,636 (+)NCBICHM1_1
T2T-CHM13v2.0937,626,930 - 37,770,615 (+)NCBIT2T-CHM13v2.0
Frmpd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39445,183,958 - 45,285,936 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl445,184,875 - 45,285,936 (+)EnsemblGRCm39 Ensembl
GRCm38445,184,420 - 45,285,936 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl445,184,875 - 45,285,936 (+)EnsemblGRCm38mm10GRCm38
MGSCv37445,197,778 - 45,298,808 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36445,206,006 - 45,307,475 (+)NCBIMGSCv36mm8
Celera445,205,799 - 45,307,566 (+)NCBICelera
Cytogenetic Map4B1NCBI
cM Map423.77NCBI
Frmpd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8564,238,730 - 64,340,778 (+)NCBIGRCr8
mRatBN7.2559,443,076 - 59,545,125 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl559,443,076 - 59,545,080 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx561,417,025 - 61,519,412 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0563,236,550 - 63,338,911 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0563,205,781 - 63,308,130 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0560,735,413 - 60,837,773 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl560,809,762 - 60,837,764 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0565,243,896 - 65,346,330 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4561,748,052 - 61,849,848 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1561,792,640 - 61,849,904 (+)NCBI
Celera558,011,145 - 58,113,460 (+)NCBICelera
Cytogenetic Map5q22NCBI
Frmpd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541928,716,494 - 28,888,495 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541928,717,277 - 28,888,486 (-)NCBIChiLan1.0ChiLan1.0
FRMPD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21186,841,662 - 86,987,898 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1986,847,604 - 86,946,318 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0937,497,210 - 37,595,867 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1938,421,706 - 38,519,025 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl938,421,706 - 38,519,025 (+)Ensemblpanpan1.1panPan2
Frmpd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947168,836,752 - 169,009,535 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365245,469,422 - 5,557,117 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365245,469,495 - 5,557,109 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FRMPD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1238,371,336 - 238,511,715 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11238,371,311 - 238,511,714 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21266,330,435 - 266,446,687 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FRMPD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11242,835,352 - 42,981,017 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1242,835,350 - 42,980,486 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603839,902,811 - 40,001,686 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Frmpd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249301,268,904 - 1,364,230 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249301,268,527 - 1,364,017 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in FRMPD1
1034 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 2 1 2
Low 4 5 10 8
Below cutoff 5 5 16 6 6 6 6 10 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014117868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014117869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014117871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490725 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490727 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490729 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490730 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038490731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038552864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616719 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616722 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038616724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682186 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682190 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000003740   ⟹   ENSCAFP00000003459
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1153,939,807 - 54,051,756 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845024653   ⟹   ENSCAFP00845019398
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1155,021,901 - 55,161,057 (+)Ensembl
RefSeq Acc Id: XM_014117871   ⟹   XP_013973346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11154,019,360 - 54,051,885 (+)NCBI
Dog10K_Boxer_Tasha1152,445,318 - 52,477,822 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038490722   ⟹   XP_038346650
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,509,177 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490724   ⟹   XP_038346652
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,543,129 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490725   ⟹   XP_038346653
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,527,405 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490726   ⟹   XP_038346654
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,527,405 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490727   ⟹   XP_038346655
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,568,523 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490728   ⟹   XP_038346656
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,568,952 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490729   ⟹   XP_038346657
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,584,128 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490730   ⟹   XP_038346658
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,509,178 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038490731   ⟹   XP_038346659
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11153,626,716 - 53,659,218 (+)NCBI
RefSeq Acc Id: XM_038552855   ⟹   XP_038408783
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,234,835 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552856   ⟹   XP_038408784
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,268,804 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552858   ⟹   XP_038408786
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,253,075 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552859   ⟹   XP_038408787
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,253,075 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552860   ⟹   XP_038408788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,294,195 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552861   ⟹   XP_038408789
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,294,624 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552862   ⟹   XP_038408790
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,309,798 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552863   ⟹   XP_038408791
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,234,836 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038552864   ⟹   XP_038408792
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01154,352,605 - 54,385,113 (+)NCBI
RefSeq Acc Id: XM_038616716   ⟹   XP_038472644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,538,813 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616717   ⟹   XP_038472645
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,572,766 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616718   ⟹   XP_038472646
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,557,034 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616719   ⟹   XP_038472647
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,557,034 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616720   ⟹   XP_038472648
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,598,168 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616721   ⟹   XP_038472649
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,598,597 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616722   ⟹   XP_038472650
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,613,765 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616723   ⟹   XP_038472651
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,538,814 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038616724   ⟹   XP_038472652
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01153,656,350 - 53,688,852 (+)NCBI
RefSeq Acc Id: XM_038663555   ⟹   XP_038519483
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1152,402,723 - 52,477,822 (+)NCBI
RefSeq Acc Id: XM_038663560   ⟹   XP_038519488
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1152,402,723 - 52,477,822 (+)NCBI
RefSeq Acc Id: XM_038682186   ⟹   XP_038538114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,010,993 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682187   ⟹   XP_038538115
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,044,939 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682188   ⟹   XP_038538116
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,029,226 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682189   ⟹   XP_038538117
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,029,226 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682190   ⟹   XP_038538118
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,070,342 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682191   ⟹   XP_038538119
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,070,771 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682192   ⟹   XP_038538120
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,085,950 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682193   ⟹   XP_038538121
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,010,994 - 55,161,059 (+)NCBI
RefSeq Acc Id: XM_038682194   ⟹   XP_038538122
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01155,128,547 - 55,161,059 (+)NCBI
Protein Sequences
Protein RefSeqs XP_013973346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346650 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346653 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346654 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346655 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346656 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346657 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346658 (Get FASTA)   NCBI Sequence Viewer  
  XP_038346659 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408783 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408784 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408786 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408787 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408788 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408789 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408790 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408791 (Get FASTA)   NCBI Sequence Viewer  
  XP_038408792 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472644 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472645 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472646 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472647 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472648 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472649 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472650 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472651 (Get FASTA)   NCBI Sequence Viewer  
  XP_038472652 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519483 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519488 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538114 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538115 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538116 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538117 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538118 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538119 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538120 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538121 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538122 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000003459.4
  ENSCAFP00000072350.1
  ENSCAFP00030008722.1
  ENSCAFP00040026549.1
  ENSCAFP00845019398
  ENSCAFP00845019398.1
Reference Protein Sequences
RefSeq Acc Id: XP_013973346   ⟸   XM_014117871
- Peptide Label: isoform X3
- UniProtKB: A0A8P0S874 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000003459   ⟸   ENSCAFT00000003740
RefSeq Acc Id: XP_038346650   ⟸   XM_038490722
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346658   ⟸   XM_038490730
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038346653   ⟸   XM_038490725
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346654   ⟸   XM_038490726
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346652   ⟸   XM_038490724
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346655   ⟸   XM_038490727
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346656   ⟸   XM_038490728
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346657   ⟸   XM_038490729
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038346659   ⟸   XM_038490731
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038472644   ⟸   XM_038616716
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472651   ⟸   XM_038616723
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038472646   ⟸   XM_038616718
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472647   ⟸   XM_038616719
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472645   ⟸   XM_038616717
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472648   ⟸   XM_038616720
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472649   ⟸   XM_038616721
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472650   ⟸   XM_038616722
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038472652   ⟸   XM_038616724
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038538114   ⟸   XM_038682186
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538121   ⟸   XM_038682193
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KZJ2 (UniProtKB/TrEMBL),   A0A8C0YZZ9 (UniProtKB/TrEMBL),   A0A8I3S0E1 (UniProtKB/TrEMBL),   A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538116   ⟸   XM_038682188
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538117   ⟸   XM_038682189
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538115   ⟸   XM_038682187
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538118   ⟸   XM_038682190
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538119   ⟸   XM_038682191
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538120   ⟸   XM_038682192
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538122   ⟸   XM_038682194
- Peptide Label: isoform X3
- UniProtKB: A0A8P0S874 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519483   ⟸   XM_038663555
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519488   ⟸   XM_038663560
- Peptide Label: isoform X2
- UniProtKB: A0A8P0TR23 (UniProtKB/TrEMBL),   A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408783   ⟸   XM_038552855
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408791   ⟸   XM_038552863
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL),   A0A8P0TR23 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408786   ⟸   XM_038552858
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408787   ⟸   XM_038552859
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408784   ⟸   XM_038552856
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408788   ⟸   XM_038552860
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408789   ⟸   XM_038552861
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408790   ⟸   XM_038552862
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHU3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038408792   ⟸   XM_038552864
- Peptide Label: isoform X3
- UniProtKB: A0A8P0S874 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845019398   ⟸   ENSCAFT00845024653
Protein Domains
FERM   PDZ


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002386 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030005439 UniProtKB/TrEMBL
  ENSCAFG00040016541 UniProtKB/TrEMBL
  ENSCAFG00845013816 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000003740.5 UniProtKB/TrEMBL
  ENSCAFT00000099158.1 UniProtKB/TrEMBL
  ENSCAFT00030009962.1 UniProtKB/TrEMBL
  ENSCAFT00040030544.1 UniProtKB/TrEMBL
  ENSCAFT00845024653 ENTREZGENE
  ENSCAFT00845024653.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.80.10 UniProtKB/TrEMBL
  2.30.29.30 UniProtKB/TrEMBL
  2.30.42.10 UniProtKB/TrEMBL
InterPro Band_41_domain UniProtKB/TrEMBL
  FERM/acyl-CoA-bd_prot_sf UniProtKB/TrEMBL
  FERM_2 UniProtKB/TrEMBL
  FERM_central UniProtKB/TrEMBL
  FERM_domain UniProtKB/TrEMBL
  FRMPD1/3/4_FERM_C UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
  PDZ_sf UniProtKB/TrEMBL
  PH-like_dom_sf UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/TrEMBL
NCBI Gene FRMPD1 ENTREZGENE
PANTHER FERM AND PDZ DOMAIN-CONTAINING PROTEIN 1 UniProtKB/TrEMBL
  FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER UniProtKB/TrEMBL
Pfam FERM_M UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
PROSITE FERM_3 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
SMART B41 UniProtKB/TrEMBL
  PDZ UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF47031 UniProtKB/TrEMBL
  SSF50156 UniProtKB/TrEMBL
  SSF54236 UniProtKB/TrEMBL
UniProt A0A8C0KZJ2 ENTREZGENE
  A0A8C0MHU3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YZZ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3S0E1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0S874 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TR23 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:51720 ENTREZGENE