OR10J14 (olfactory receptor family 10 subfamily J member 14) - Rat Genome Database

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Gene: OR10J14 (olfactory receptor family 10 subfamily J member 14) Canis lupus familiaris
Analyze
Symbol: OR10J14
Name: olfactory receptor family 10 subfamily J member 14
RGD ID: 12408667
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: olfactory receptor; OR12E11; putative olfactory receptor 10J6
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13822,471,969 - 22,473,711 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3822,549,117 - 22,550,040 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03822,595,193 - 22,596,119 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3822,595,193 - 22,596,119 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13822,361,545 - 22,362,467 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03822,894,063 - 22,894,989 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03823,305,365 - 23,306,291 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:14659017   PMID:22301074  


Genomics

Comparative Map Data
OR10J14
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13822,471,969 - 22,473,711 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3822,549,117 - 22,550,040 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03822,595,193 - 22,596,119 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3822,595,193 - 22,596,119 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13822,361,545 - 22,362,467 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03822,894,063 - 22,894,989 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03823,305,365 - 23,306,291 (-)NCBIUU_Cfam_GSD_1.0
OR10J5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381159,535,078 - 159,536,007 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1159,535,078 - 159,536,007 (-)EnsemblGRCh38hg38GRCh38
GRCh371159,504,868 - 159,505,797 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361157,771,492 - 157,772,421 (-)NCBINCBI36Build 36hg18NCBI36
Build 341156,317,940 - 156,318,870NCBI
Celera1132,574,270 - 132,575,199 (-)NCBICelera
Cytogenetic Map1q23.2NCBI
HuRef1130,861,928 - 130,862,857 (-)NCBIHuRef
CHM1_11160,900,347 - 160,901,276 (-)NCBICHM1_1
T2T-CHM13v2.01158,672,150 - 158,673,079 (-)NCBIT2T-CHM13v2.0
Or10j5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,784,335 - 172,785,384 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,777,976 - 172,785,924 (+)EnsemblGRCm39 Ensembl
GRCm381172,956,768 - 172,957,817 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,950,409 - 172,958,357 (+)EnsemblGRCm38mm10GRCm38
MGSCv371174,886,899 - 174,887,948 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361174,793,472 - 174,794,401 (+)NCBIMGSCv36mm8
Celera1175,804,768 - 175,805,817 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map180.33NCBI
Or10j5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81387,962,973 - 87,963,902 (+)NCBIGRCr8
mRatBN7.21385,430,655 - 85,431,584 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1385,424,254 - 85,432,107 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1387,928,998 - 87,929,927 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01389,329,293 - 89,330,222 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01386,514,003 - 86,514,932 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01391,481,461 - 91,482,390 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1391,481,461 - 91,482,390 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01395,994,475 - 95,995,404 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41389,170,387 - 89,171,316 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11389,359,270 - 89,360,200 (+)NCBI
Celera1385,035,965 - 85,036,894 (+)NCBICelera
Cytogenetic Map13q24NCBI
LOC100973313
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2190,322,225 - 90,325,689 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1190,059,875 - 90,063,338 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01134,881,761 - 134,883,765 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11138,679,408 - 138,680,445 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1138,679,477 - 138,680,406 (-)Ensemblpanpan1.1panPan2
LOC101970211
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050585,705,790 - 5,706,810 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367401,040,510 - 1,048,637 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367401,047,708 - 1,048,645 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LOC100155689
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1490,890,488 - 90,896,616 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2498,893,306 - 98,894,235 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103223754
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1204,401,134 - 4,403,747 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660383,531,244 - 3,532,648 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in OR10J14
57 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

endocrine system exocrine system hemolymphoid system hepatobiliary system reproductive system adipose tissue
High
Medium
Low
Below cutoff 1 1 1 1 4 2

Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00845055085   ⟹   ENSCAFP00845043315
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3822,595,193 - 22,596,119 (-)Ensembl
RefSeq Acc Id: NM_001388780   ⟹   NP_001375709
RefSeq Status: INFERRED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha3822,549,117 - 22,550,040 (-)NCBI
ROS_Cfam_1.03822,595,193 - 22,596,119 (-)NCBI
UMICH_Zoey_3.13822,361,545 - 22,362,467 (-)NCBI
UNSW_CanFamBas_1.03822,894,063 - 22,894,989 (-)NCBI
UU_Cfam_GSD_1.03823,305,365 - 23,306,291 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001375709 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein CAD24216 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000017325.3
  ENSCAFP00030022755.1
  ENSCAFP00845043315
  ENSCAFP00845043315.1
Reference Protein Sequences
RefSeq Acc Id: NP_001375709   ⟸   NM_001388780
- UniProtKB: A0A8C0NHZ5 (UniProtKB/TrEMBL),   A0A8P0NDS4 (UniProtKB/TrEMBL),   A0A8I3QW42 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845043315   ⟸   ENSCAFT00845055085
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011785 UniProtKB/TrEMBL
  ENSCAFG00030014070 UniProtKB/TrEMBL
  ENSCAFG00845030993 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018701.4 UniProtKB/TrEMBL
  ENSCAFT00030026057.1 UniProtKB/TrEMBL
  ENSCAFT00845055085 ENTREZGENE
  ENSCAFT00845055085.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene OR12E11 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 10J6-RELATED UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0NHZ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QW42 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NDS4 ENTREZGENE
UniProt Secondary A0A8P0NDS4 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-11-24 OR10J14  olfactory receptor family 10 subfamily J member 14  OR12E11  olfactory receptor  Symbol and/or name change 5135510 APPROVED