RUNX1 (RUNX family transcription factor 1) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: RUNX1 (RUNX family transcription factor 1) Canis lupus familiaris
Analyze
Symbol: RUNX1
Name: RUNX family transcription factor 1
RGD ID: 12405646
Description: ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); central nervous system development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: runt related transcription factor 1; runt-related transcription factor 1; runt-related transcription factor 1 (acute myeloid leukemia 1, aml1 oncogene)
RGD Orthologs
Human
Mouse
Rat
Pig
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13130,170,859 - 30,420,344 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3129,270,454 - 29,519,721 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03129,472,070 - 29,721,306 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,721,439 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13129,337,954 - 29,586,748 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03129,353,308 - 29,602,472 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03129,843,623 - 30,092,833 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View
acute lymphoblastic leukemia  (ISO)
acute megakaryocytic leukemia  (ISO)
acute myeloid leukemia  (ISO)
amyotrophic lateral sclerosis  (ISO)
amyotrophic lateral sclerosis type 1  (ISO)
anaplastic ependymoma  (ISO)
atypical chronic myeloid leukemia  (ISO)
autoimmune disease  (ISO)
autosomal dominant intellectual developmental disorder 7  (ISO)
B-lymphoblastic leukemia/lymphoma  (ISO)
blood platelet disease  (ISO)
Bone Fractures  (ISO)
colon signet ring adenocarcinoma  (ISO)
colorectal adenocarcinoma  (ISO)
colorectal cancer  (ISO)
endometrial cancer  (ISO)
endometriosis  (ISO)
esophagus squamous cell carcinoma  (ISO)
Experimental Leukemia  (ISO)
Experimental Mammary Neoplasms  (ISO)
Familial Platelet Disorder with Associated Myeloid Malignancy  (ISO)
genetic disease  (ISO)
glioblastoma  (ISO)
hemorrhagic disease  (ISO)
hepatocellular carcinoma  (ISO)
Hereditary Neoplastic Syndromes  (ISO)
high grade ependymoma  (ISO)
Intestinal Neoplasms  (ISO)
intrahepatic cholangiocarcinoma  (ISO)
juvenile myelomonocytic leukemia  (ISO)
long QT syndrome 6  (ISO)
lung adenocarcinoma  (ISO)
lung non-small cell carcinoma  (ISO)
Lymphatic Metastasis  (ISO)
middle cerebral artery infarction  (ISO)
multicentric Castleman disease  (ISO)
myelodysplastic syndrome  (ISO)
myeloid neoplasm  (ISO)
pancytopenia  (ISO)
Parkinson's disease 20  (ISO)
platelet storage pool deficiency  (ISO)
Prostatic Neoplasms  (ISO)
rheumatoid arthritis  (ISO)
sciatic neuropathy  (ISO)
Spina Bifida Cystica  (ISO)
stomach cancer  (ISO)
T-cell acute lymphoblastic leukemia  (ISO)
T-cell non-Hodgkin lymphoma  (ISO)
thrombocytopenia  (ISO)
transient myeloproliferative syndrome  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
behavioral response to pain  (ISO)
cellular response to transforming growth factor beta stimulus  (ISO)
central nervous system development  (ISO)
chondrocyte differentiation  (IEA)
definitive hemopoiesis  (ISO)
embryonic hemopoiesis  (ISO)
hair follicle morphogenesis  (ISO)
hemopoiesis  (IEA)
in utero embryonic development  (ISO)
liver development  (ISO)
myeloid cell differentiation  (ISO)
myeloid leukocyte differentiation  (IEA)
myeloid progenitor cell differentiation  (ISO)
negative regulation of CD4-positive, alpha-beta T cell differentiation  (ISO)
negative regulation of cell population proliferation  (ISO)
negative regulation of DNA-templated transcription  (ISO)
negative regulation of granulocyte differentiation  (ISO)
negative regulation of transcription by RNA polymerase II  (ISO)
neuron development  (ISO)
neuron differentiation  (IEA,ISO)
neuron fate commitment  (ISO)
ossification  (IEA)
positive regulation of angiogenesis  (ISO)
positive regulation of CD8-positive, alpha-beta T cell differentiation  (ISO)
positive regulation of cell maturation  (ISO)
positive regulation of developmental process  (IEA)
positive regulation of DNA-templated transcription  (IEA,ISO)
positive regulation of granulocyte differentiation  (IEA)
positive regulation of interleukin-2 production  (IEA)
positive regulation of progesterone secretion  (ISO)
positive regulation of transcription by RNA polymerase II  (IEA,ISO)
positive regulation of type II interferon production  (ISO)
regulation of cell differentiation  (IEA)
regulation of DNA-templated transcription  (IEA,ISO)
regulation of hair follicle cell proliferation  (ISO)
regulation of signal transduction  (ISO)
regulation of T cell anergy  (ISO)
response to denervation involved in regulation of muscle adaptation  (ISO)
response to retinoic acid  (ISO)
skeletal system development  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RUNX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13130,170,859 - 30,420,344 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3129,270,454 - 29,519,721 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03129,472,070 - 29,721,306 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,721,439 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13129,337,954 - 29,586,748 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03129,353,308 - 29,602,472 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03129,843,623 - 30,092,833 (-)NCBIUU_Cfam_GSD_1.0
RUNX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382134,787,801 - 35,049,302 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2134,787,801 - 36,004,667 (-)EnsemblGRCh38hg38GRCh38
GRCh372136,160,098 - 36,421,599 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map21q22.12NCBI
HuRef2121,639,088 - 21,900,490 (-)NCBIHuRef
CHM1_12135,722,384 - 35,983,819 (-)NCBICHM1_1
T2T-CHM13v2.02133,170,406 - 33,432,142 (-)NCBIT2T-CHM13v2.0
Runx1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391692,398,354 - 92,622,962 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1692,398,354 - 92,623,037 (-)EnsemblGRCm39 Ensembl
GRCm381692,601,466 - 92,826,074 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1692,601,466 - 92,826,149 (-)EnsemblGRCm38mm10GRCm38
MGSCv371692,601,711 - 92,826,311 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361692,492,963 - 92,586,187 (-)NCBIMGSCv36mm8
Celera1693,683,427 - 93,779,296 (-)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1653.7NCBI
Runx1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81145,325,778 - 45,560,300 (-)NCBIGRCr8
mRatBN7.21131,839,880 - 32,074,427 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1131,843,764 - 32,074,542 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1140,538,494 - 40,630,001 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01133,209,969 - 33,301,480 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01132,368,563 - 32,460,190 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01132,765,147 - 33,003,061 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1132,769,165 - 33,003,021 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01136,367,315 - 36,601,674 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41132,623,461 - 32,725,404 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11132,679,703 - 32,781,647 (-)NCBI
Celera1131,494,069 - 31,582,728 (-)NCBICelera
RH 3.4 Map11214.7RGD
Cytogenetic Map11q11NCBI
RUNX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13198,371,837 - 198,638,189 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113198,371,835 - 198,635,648 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213208,205,560 - 208,304,379 (-)NCBISscrofa10.2Sscrofa10.2susScr3

Variants

.
Variants in RUNX1
3560 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 2 2 8 4
Low 5 21 6 4 6 4 1 12 5 6
Below cutoff 5 1 5 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022413371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022413374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038443449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038517862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038581437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645810 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645811 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645812 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038645813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000318 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000076 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000015246   ⟹   ENSCAFP00000014108
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000015249   ⟹   ENSCAFP00000014111
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061277   ⟹   ENSCAFP00000061765
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000088967   ⟹   ENSCAFP00000045908
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3130,170,605 - 30,420,839 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000093353   ⟹   ENSCAFP00000054803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl3130,199,645 - 30,260,719 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046111   ⟹   ENSCAFP00845036205
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,721,439 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046187   ⟹   ENSCAFP00845036268
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,720,902 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046247   ⟹   ENSCAFP00845036316
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,568,240 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046326   ⟹   ENSCAFP00845036377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,568,240 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046393   ⟹   ENSCAFP00845036431
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,472,109 - 29,561,544 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845046455   ⟹   ENSCAFP00845036474
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl3129,500,809 - 29,561,544 (-)Ensembl
RefSeq Acc Id: XM_022413371   ⟹   XP_022269079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13130,170,859 - 30,420,328 (-)NCBI
Dog10K_Boxer_Tasha3129,270,460 - 29,519,717 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022413372   ⟹   XP_022269080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13130,170,859 - 30,420,326 (-)NCBI
Dog10K_Boxer_Tasha3129,270,460 - 29,519,709 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022413373   ⟹   XP_022269081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13130,170,859 - 30,420,338 (-)NCBI
Dog10K_Boxer_Tasha3129,270,454 - 29,519,720 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022413374   ⟹   XP_022269082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.13130,170,859 - 30,420,344 (-)NCBI
Dog10K_Boxer_Tasha3129,270,454 - 29,519,721 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038443446   ⟹   XP_038299374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03129,472,077 - 29,721,302 (-)NCBI
RefSeq Acc Id: XM_038443447   ⟹   XP_038299375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03129,472,077 - 29,721,294 (-)NCBI
RefSeq Acc Id: XM_038443448   ⟹   XP_038299376
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03129,472,071 - 29,721,305 (-)NCBI
RefSeq Acc Id: XM_038443449   ⟹   XP_038299377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.03129,472,070 - 29,721,306 (-)NCBI
RefSeq Acc Id: XM_038517859   ⟹   XP_038373787
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13129,337,961 - 29,586,744 (-)NCBI
RefSeq Acc Id: XM_038517860   ⟹   XP_038373788
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13129,337,961 - 29,586,736 (-)NCBI
RefSeq Acc Id: XM_038517861   ⟹   XP_038373789
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13129,337,955 - 29,586,747 (-)NCBI
RefSeq Acc Id: XM_038517862   ⟹   XP_038373790
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.13129,337,954 - 29,586,748 (-)NCBI
RefSeq Acc Id: XM_038581434   ⟹   XP_038437362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03129,843,631 - 30,092,830 (-)NCBI
RefSeq Acc Id: XM_038581435   ⟹   XP_038437363
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03129,843,630 - 30,092,822 (-)NCBI
RefSeq Acc Id: XM_038581436   ⟹   XP_038437364
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03129,843,623 - 30,092,833 (-)NCBI
RefSeq Acc Id: XM_038581437   ⟹   XP_038437365
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.03129,843,623 - 30,092,833 (-)NCBI
RefSeq Acc Id: XM_038645810   ⟹   XP_038501738
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03129,353,314 - 29,602,468 (-)NCBI
RefSeq Acc Id: XM_038645811   ⟹   XP_038501739
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03129,353,314 - 29,602,460 (-)NCBI
RefSeq Acc Id: XM_038645812   ⟹   XP_038501740
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03129,353,308 - 29,602,471 (-)NCBI
RefSeq Acc Id: XM_038645813   ⟹   XP_038501741
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.03129,353,308 - 29,602,472 (-)NCBI
Protein Sequences
Protein RefSeqs XP_022269079 (Get FASTA)   NCBI Sequence Viewer  
  XP_022269080 (Get FASTA)   NCBI Sequence Viewer  
  XP_022269081 (Get FASTA)   NCBI Sequence Viewer  
  XP_022269082 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299374 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299375 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299376 (Get FASTA)   NCBI Sequence Viewer  
  XP_038299377 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373787 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373788 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373789 (Get FASTA)   NCBI Sequence Viewer  
  XP_038373790 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437363 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038437365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501738 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501739 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501740 (Get FASTA)   NCBI Sequence Viewer  
  XP_038501741 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000014108.3
  ENSCAFP00000014111.4
  ENSCAFP00000045908.2
  ENSCAFP00000054803.1
  ENSCAFP00000061765.2
  ENSCAFP00000073274.1
  ENSCAFP00030042070.1
  ENSCAFP00040031253.1
  ENSCAFP00040031307.1
  ENSCAFP00040031344.1
  ENSCAFP00040031421.1
  ENSCAFP00845036205
  ENSCAFP00845036205.1
  ENSCAFP00845036268
  ENSCAFP00845036268.1
  ENSCAFP00845036316.1
  ENSCAFP00845036377
  ENSCAFP00845036377.1
  ENSCAFP00845036431.1
  ENSCAFP00845036474.1
RefSeq Acc Id: XP_022269082   ⟸   XM_022413374
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PTG2 (UniProtKB/TrEMBL),   A0A8P0PAK4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022269081   ⟸   XM_022413373
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LJJ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022269079   ⟸   XM_022413371
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL),   A0A8C0LJJ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022269080   ⟸   XM_022413372
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL),   A0A8C0LJJ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000014111   ⟸   ENSCAFT00000015249
RefSeq Acc Id: ENSCAFP00000014108   ⟸   ENSCAFT00000015246
RefSeq Acc Id: ENSCAFP00000045908   ⟸   ENSCAFT00000088967
RefSeq Acc Id: ENSCAFP00000054803   ⟸   ENSCAFT00000093353
RefSeq Acc Id: ENSCAFP00000061765   ⟸   ENSCAFT00000061277
RefSeq Acc Id: XP_038373790   ⟸   XM_038517862
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038373789   ⟸   XM_038517861
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038373787   ⟸   XM_038517859
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038373788   ⟸   XM_038517860
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038501741   ⟸   XM_038645813
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038501740   ⟸   XM_038645812
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038501738   ⟸   XM_038645810
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038501739   ⟸   XM_038645811
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038299377   ⟸   XM_038443449
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PTG2 (UniProtKB/TrEMBL),   A0A8P0PAK4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299376   ⟸   XM_038443448
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LJJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299374   ⟸   XM_038443446
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL),   A0A8C0LJJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038299375   ⟸   XM_038443447
- Peptide Label: isoform X1
- UniProtKB: A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL),   A0A8C0LJJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437365   ⟸   XM_038581437
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PTG2 (UniProtKB/TrEMBL),   A0A8P0PAK4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437364   ⟸   XM_038581436
- Peptide Label: isoform X2
- UniProtKB: A0A8C0LJJ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437363   ⟸   XM_038581435
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LJJ8 (UniProtKB/TrEMBL),   A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038437362   ⟸   XM_038581434
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LJJ8 (UniProtKB/TrEMBL),   A0A8C0T5L9 (UniProtKB/TrEMBL),   A0A8I3PXI2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845036377   ⟸   ENSCAFT00845046326
RefSeq Acc Id: ENSCAFP00845036205   ⟸   ENSCAFT00845046111
RefSeq Acc Id: ENSCAFP00845036431   ⟸   ENSCAFT00845046393
RefSeq Acc Id: ENSCAFP00845036268   ⟸   ENSCAFT00845046187
RefSeq Acc Id: ENSCAFP00845036474   ⟸   ENSCAFT00845046455
RefSeq Acc Id: ENSCAFP00845036316   ⟸   ENSCAFT00845046247
Protein Domains
Runt


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009596 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030026003 UniProtKB/TrEMBL
  ENSCAFG00040019321 UniProtKB/TrEMBL
  ENSCAFG00845026139 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000015246.6 UniProtKB/TrEMBL
  ENSCAFT00000015249.5 UniProtKB/TrEMBL
  ENSCAFT00000061277.2 UniProtKB/TrEMBL
  ENSCAFT00000088967.2 UniProtKB/TrEMBL
  ENSCAFT00000093353.2 UniProtKB/TrEMBL
  ENSCAFT00000094101.1 UniProtKB/TrEMBL
  ENSCAFT00030048085.1 UniProtKB/TrEMBL
  ENSCAFT00040035875.1 UniProtKB/TrEMBL
  ENSCAFT00040035938.1 UniProtKB/TrEMBL
  ENSCAFT00040035985.1 UniProtKB/TrEMBL
  ENSCAFT00040036082.1 UniProtKB/TrEMBL
  ENSCAFT00845046111 ENTREZGENE
  ENSCAFT00845046111.1 UniProtKB/TrEMBL
  ENSCAFT00845046187 ENTREZGENE
  ENSCAFT00845046187.1 UniProtKB/TrEMBL
  ENSCAFT00845046247.1 UniProtKB/TrEMBL
  ENSCAFT00845046326 ENTREZGENE
  ENSCAFT00845046326.1 UniProtKB/TrEMBL
  ENSCAFT00845046393.1 UniProtKB/TrEMBL
  ENSCAFT00845046455.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.720 UniProtKB/TrEMBL
InterPro AML1_Runt UniProtKB/TrEMBL
  p53-like_TF_DNA-bd UniProtKB/TrEMBL
  p53/RUNT-type_TF_DNA-bd_sf UniProtKB/TrEMBL
  Runt_dom UniProtKB/TrEMBL
  Runx_central_dom_sf UniProtKB/TrEMBL
  RunxI_C_dom UniProtKB/TrEMBL
  TF_Runt-rel_RUNX UniProtKB/TrEMBL
NCBI Gene RUNX1 ENTREZGENE
PANTHER PTHR11950 UniProtKB/TrEMBL
  RUNT-RELATED TRANSCRIPTION FACTOR 1 UniProtKB/TrEMBL
Pfam Runt UniProtKB/TrEMBL
  RunxI UniProtKB/TrEMBL
PIRSF TF_Runt-rel_RUNX UniProtKB/TrEMBL
PRINTS ONCOGENEAML1 UniProtKB/TrEMBL
PROSITE RUNT UniProtKB/TrEMBL
Superfamily-SCOP SSF49417 UniProtKB/TrEMBL
UniProt A0A8C0LJJ8 ENTREZGENE
  A0A8C0PMG0_CANLF UniProtKB/TrEMBL
  A0A8C0T5L9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0T6V3_CANLF UniProtKB/TrEMBL
  A0A8C0T9B4_CANLF UniProtKB/TrEMBL
  A0A8I3PSG0_CANLF UniProtKB/TrEMBL
  A0A8I3PSM8_CANLF UniProtKB/TrEMBL
  A0A8I3PT42_CANLF UniProtKB/TrEMBL
  A0A8I3PTG2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PTR6_CANLF UniProtKB/TrEMBL
  A0A8I3PXI2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NW31_CANLF UniProtKB/TrEMBL
  A0A8P0PAK4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TRZ5_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:49641 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-16 RUNX1  RUNX family transcription factor 1    runt related transcription factor 1  Symbol and/or name change 5135510 APPROVED