RIMKLA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 15 | 853,705 - 888,721 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 15 | 856,719 - 889,138 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 15 | 1,108,525 - 1,143,813 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 15 | 935,312 - 970,597 (-) | NCBI | | ROS_Cfam_1.0 | | | UMICH_Zoey_3.1 | 15 | 844,536 - 879,796 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 15 | 906,054 - 941,309 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 15 | 921,178 - 956,452 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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RIMKLA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 1 | 42,380,792 - 42,424,232 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 42,380,792 - 42,424,232 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 42,846,463 - 42,889,903 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 42,619,064 - 42,653,437 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 1 | 41,128,424 - 41,171,853 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | p34.2 | NCBI | | | | | HuRef | 1 | 40,966,574 - 41,009,995 (+) | NCBI | | HuRef | | | CHM1_1 | 1 | 42,963,386 - 43,006,757 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 42,251,175 - 42,294,608 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Rimkla (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 4 | 119,322,480 - 119,349,795 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 119,322,480 - 119,349,825 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 119,465,283 - 119,492,598 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 119,465,283 - 119,492,628 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 119,137,888 - 119,165,203 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 118,963,215 - 118,990,511 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 118,196,499 - 118,223,900 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | D2.1 | NCBI | | | | | cM Map | 4 | 55.4 | NCBI | | | | |
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Rimkla (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 138,357,463 - 138,384,132 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 133,072,179 - 133,098,840 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 133,073,960 - 133,098,792 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 5 | 138,518,559 - 138,545,577 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 138,521,340 - 138,545,404 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 142,324,385 - 142,350,390 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 140,060,901 - 140,085,824 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 140,067,034 - 140,090,967 (-) | NCBI | | | | | Celera | 5 | 131,595,800 - 131,622,259 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q36 | NCBI | | | | |
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Rimkla (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955537 | 1,992,670 - 2,021,340 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955537 | 1,992,660 - 2,024,331 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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RIMKLA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 184,389,708 - 184,431,363 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 183,531,601 - 183,573,319 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 41,680,447 - 41,722,087 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 43,061,769 - 43,103,043 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 43,061,769 - 43,095,443 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Rimkla (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405058 | 57,975,850 - 58,009,557 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936474 | 23,800,642 - 23,824,145 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936474 | 23,800,632 - 23,827,184 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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RIMKLA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 6 | 168,916,725 - 168,950,046 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 6 | 168,909,477 - 168,949,921 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 6 | 156,332,262 - 156,352,608 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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RIMKLA (Chlorocebus sabaeus - green monkey) |
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Rimkla (Heterocephalus glaber - naked mole-rat) |
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