COPG1 (COPI coat complex subunit gamma 1)

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Gene: COPG1 (COPI coat complex subunit gamma 1) Canis lupus familiaris

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Symbol:

COPG1

Name:

COPI coat complex subunit gamma 1

RGD ID:

12399007

Description:

ENCODES a protein that exhibits structural molecule activity (inferred); INVOLVED IN establishment of Golgi localization (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH alkaptonuria (ortholog); combined immunodeficiency (ortholog); immunodeficiency 21 (ortholog); FOUND IN COPI vesicle coat (inferred); COPI-coated vesicle membrane (inferred); cytoplasm (inferred); INTERACTS WITH mocetinostat

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

coatomer protein complex subunit gamma 1; coatomer subunit gamma-1; COPG

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	2,832,150 - 2,860,356 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	2,832,198 - 2,860,320 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	2,869,065 - 2,897,262 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	2,852,770 - 2,880,977 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	2,844,919 - 2,880,996 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	2,572,649 - 2,600,856 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	2,895,653 - 2,923,949 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	2,860,084 - 2,888,263 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

alkaptonuria (ISO)

combined immunodeficiency (ISO)

immunodeficiency 21 (ISO)

malignant mesothelioma (ISO)

polyclonal hypergammaglobulinemia (ISO)

Primary Lymphedema with Myelodysplasia (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

mocetinostat (EXP)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

establishment of Golgi localization (ISO)

intracellular protein transport (IEA)

organelle transport along microtubule (ISO)

protein transport (IEA)

vesicle-mediated transport (IEA)

Cellular Component

COPI vesicle coat (IEA)

COPI-coated vesicle membrane (IEA)

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

Golgi apparatus (IEA)

Golgi membrane (IEA)

membrane (IEA)

Molecular Function

protein binding (ISO)

structural molecule activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202	PMID:30404858

Genomics

Comparative Map Data

COPG1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	2,832,150 - 2,860,356 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	2,832,198 - 2,860,320 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	2,869,065 - 2,897,262 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	2,852,770 - 2,880,977 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	2,844,919 - 2,880,996 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	2,572,649 - 2,600,856 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	2,895,653 - 2,923,949 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	2,860,084 - 2,888,263 (-)	NCBI		UU_Cfam_GSD_1.0

COPG1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	129,249,606 - 129,277,773 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	129,249,606 - 129,277,773 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	128,968,449 - 128,996,616 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	130,451,143 - 130,479,306 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	130,451,150 - 130,479,312	NCBI
Celera	3	127,399,234 - 127,427,322 (+)	NCBI		Celera
Cytogenetic Map	3	q21.3	NCBI
HuRef	3	126,353,590 - 126,381,662 (+)	NCBI		HuRef
CHM1_1	3	128,931,675 - 128,959,852 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	131,994,406 - 132,022,572 (+)	NCBI		T2T-CHM13v2.0

Copg1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	87,864,801 - 87,890,577 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	87,864,796 - 87,890,577 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	87,887,819 - 87,913,595 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	87,887,814 - 87,913,595 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	87,837,934 - 87,863,589 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	87,853,581 - 87,879,236 (+)	NCBI		MGSCv36	mm8
Celera	6	89,824,999 - 89,850,681 (+)	NCBI		Celera
Cytogenetic Map	6	D1	NCBI
cM Map	6	39.13	NCBI

Copg1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	121,923,644 - 121,949,819 (+)	NCBI		GRCr8
mRatBN7.2	4	120,366,540 - 120,392,502 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	120,366,542 - 120,415,616 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	125,839,212 - 125,863,727 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	121,613,989 - 121,638,505 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	120,238,238 - 120,262,752 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	119,815,041 - 119,840,997 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	119,815,139 - 119,864,114 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	185,062,623 - 185,088,579 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	122,109,613 - 122,134,049 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	4	109,326,188 - 109,350,625 (+)	NCBI		Celera
Cytogenetic Map	4	q34	NCBI

Copg1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	13,578,494 - 13,616,463 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	13,582,676 - 13,615,801 (+)	NCBI	ChiLan1.0	ChiLan1.0

COPG1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	127,185,345 - 127,213,547 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	127,190,069 - 127,218,271 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	126,310,558 - 126,338,726 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	133,664,856 - 133,693,633 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	133,664,856 - 133,694,849 (+)	Ensembl	panpan1.1		panPan2

Copg1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	20,196,871 - 20,218,086 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936798	238,571 - 260,083 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936798	238,741 - 259,962 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COPG1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	71,672,733 - 71,730,399 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	71,707,097 - 71,730,402 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	79,410,094 - 79,420,841 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COPG1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	51,787,002 - 51,812,031 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	51,787,340 - 51,812,026 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	114,585,201 - 114,613,333 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Copg1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624872	299,625 - 320,974 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in COPG1
219 total Variants

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038426766	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502575	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565484	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629606	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_533723	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000006920 ⟹ ENSCAFP00000006404

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	2,832,237 - 2,860,320 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082356 ⟹ ENSCAFP00000061285

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	2,832,198 - 2,860,320 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035221 ⟹ ENSCAFP00845027569

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	2,844,919 - 2,880,952 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035359 ⟹ ENSCAFP00845027677

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	2,852,774 - 2,880,996 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035578 ⟹ ENSCAFP00845027832

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	2,852,775 - 2,880,962 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035714 ⟹ ENSCAFP00845027942

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	2,852,818 - 2,880,992 (-)	Ensembl

RefSeq Acc Id:

XM_038426766 ⟹ XP_038282694

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	2,852,770 - 2,880,977 (-)	NCBI

RefSeq Acc Id:

XM_038502575 ⟹ XP_038358503

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	2,572,649 - 2,600,856 (-)	NCBI

RefSeq Acc Id:

XM_038565484 ⟹ XP_038421412

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	2,860,084 - 2,888,263 (-)	NCBI

RefSeq Acc Id:

XM_038629606 ⟹ XP_038485534

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	2,895,653 - 2,923,949 (-)	NCBI

RefSeq Acc Id:

XM_533723 ⟹ XP_533723

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	2,832,150 - 2,860,356 (-)	NCBI
Dog10K_Boxer_Tasha	20	2,869,065 - 2,897,262 (-)	NCBI

Sequence:

show sequence

TGCGCAGAACGCGGGACTACGTGGCTGGCCGGAAGTGGCCTGTGCGGAGCTGCCCCCGGGTCGC
TGCCGCTTGCTGCACGGGTCTGCCACAGGGCTGCTGCTTCGCGCCCCGCCGGCACCACCATGCT
GAAGAAATTCGACAAGAAAGACGAGGAGTCGGGTGGAGGCTCTAACCCATTCCAGCATCTTGAG
AAGAGTGCAGTACTCCAGGAGGCTCGTGTATTTAATGAAACTCCCATCAATCCTCGAAAATGTG
CGCACATCCTCACCAAGATCCTTTACCTCATAAACCAGGGGGAGCACCTAGGGACCACTGAAGC
AACTGAGGCCTTCTTTGCCATGACCAAGCTCTTTCAGTCCAATGACCCCACGCTCCGTCGGATG
TGCTACTTGACCATCAAGGAGATGTCTTGCATCGCTGAGGATGTTATTATCGTCACCAGCAGCC
TGACAAAGGACATGACTGGGAAAGAAGACAACTACCGGGGCCCAGCTGTGCGTGCCCTTTGCCA
GATTACTGACAGCACCATGCTGCAGGCTATCGAGCGCTACATGAAACAGGCCATCGTGGACAAG
GTGCCCAGTGTCTCCAGTTCTGCCCTGGTGTCTTCCCTGCACCTGCTGAAGTGCAGCTTTGACG
TAGTCAAGCGCTGGGTGAATGAGGCCCAGGAGGCGGCATCCAGCGATAACATCATGGTCCAGTA
CCATGCTCTGGGGCTCCTGTACCATGTGCGTAAGAACGACCGCCTGGCTGTCAACAAGATGATC
AGCAAGTTCACCAGGCACGGCCTCAAGTCTCCCTTTGCCTACTGCATGATGATCCGGGTGGCCA
GCAAGCAGCTGGAGGAGGAGGACGGCAGCCGTGACAGCCCACTGTTTGACTTCATTGAGAGCTG
TTTGCGCAACAAGCATGAGATGGTGGTGTATGAAGCTGCCTCAGCCATCGTCAATCTGCCAGGT
TGCAGCGCCAAAGAGCTGGCCCCAGCTGTGTCAGTGCTCCAGCTTTTCTGCAGCTCACCTAAGG
CCGCTCTCCGCTATGCTGCTGTCCGCACCCTCAATAAGGTGGCCATGAAGCACCCTTCTGCAGT
GACAGCATGCAATCTGGATCTGGAGAACCTGGTGACAGACTCAAACCGTAGCATCGCTACACTG
GCCATCACCACGCTCCTCAAGACCGGCAGTGAGAGCAGCATCGACCGCCTCATGAAGCAGATCT
CGTCCTTCATGTCAGAGATCTCAGATGAGTTCAAGGTGGTGGTGGTCCAGGCCATCAGTGCCCT
GTGTCAGAAGTATCCTCGCAAACACGCTGTGCTCATGAACTTCCTGTTCACCATGCTGCGGGAA
GAGGGTGGCTTTGAATACAAGCGGGCCATCGTGGATTGCATCATCAGCATCATTGAGGAGAACA
CAGAGAGCAAGGAGACGGGGCTGTCACACCTGTGCGAGTTCATCGAGGACTGCGAGTTCACCGT
GCTGGCCACCCGCATCCTGCATCTTCTAGGGCAGGAGGGACCCAAGACCAACAACCCTTCCAAG
TATATCCGCTTCATCTATAACCGTGTAGTTTTGGAGCATGAGGAGGTCCGGGCAGGTGCTGTGA
GTGCTCTGGCCAAGTTTGGAGCCCAGAATGAAGAGATGTTACCCAGTATCTTGGTGTTGCTGAA
GAGGTGTGTGATGGATGATGACAATGAAGTAAGGGACCGAGCCACCTTCTATCTCAATGTCCTG
GAGCAGAAGCAGAAGGCCCTCAATGCAGGGTATATCCTAAATGGTCTGACGGTTTCCATCCCTG
GTCTGGAGAGAGCTCTGCAGCAGTATACTCTAGAACCATCAGAAAAACCTTTTGACCTCAAGTC
TGTGCCCCTGGCCACCACGCCAATGGCAGAGCAGAGAACAGAAAGCACCCCCATCACAGCCGCC
AAGCAGCCTGAGAAAGTGGCAGCTACCCGGCAAGAGATCTTCCAGGAGCAGTTGGCGGCAGTGC
CAGAGTTCCATGGCCTGGGGCCCCTCTTCAAGTCTTCGCCTGAGCCTGTGGCCCTCACTGAATC
AGAGACAGAGTATGTCATCCGCTGCACCAAACACACCTTCACTGATCACATGGTGTTCCAGTTT
GACTGCACAAACACACTCAACGACCAGACCTTGGAGAACGTCACAGTGCAGATGGAGCCCACTG
AAGCCTATGAGGTGGTCTCTTACGTGCCTGCCCGAAGCCTACCCTACAACCAGCCTGGGACCTG
CTACACATTGGTGTCACTGCCCAAGGAAGACCCCACAGCTGTGGCCTGCACATTCAGCTGCATG
ATGAAGTTCACTGTCAAGGACTGTGACCCCACCACTGGGGAGACTGATGATGAAGGCTATGAAG
ATGAATATGTGCTGGAAGATCTGGAAATCACTGTTGCTGATCATATCCAAAAGGTCATGAAACT
GAACTTTGAAGCAGCCTGGGATGAGGTAGGGGATGAGTTTGAGAAAGAGGAAACATTCACCTTG
TCTACTATCAAGACACTTGAAGAGGCTGTGGGCAATATCGTGAAATTCCTGGGAATGCATCCTT
GTGAGAGGTCAGACAAAGTGCCAGATAACAAGAACACCCACACATTGCTTCTGGCTGGTGTGTT
CCGGGGAGGTCATGATATCTTGGTGCGCTCCAGACTGCTGCTTTTGGACACAGTAACAATGCAG
GTGACAGCCAGAAGTTCAGAGGAGCTGCCAGTAGACATCATCTTGGCATCTGTGGGCTAAGGGG
CCAGACTGCATGGACCCTGCTCCTACCCTTTTCCCCTCAACACTACGCAGAAGTCATGCCTTCA
TCCTGAATTCCAATGGAAACTCCTTCCCAAGCCTCTGCATTCAAAAACAACTAGGAATCACTGG
GGAAAAAAAAAAATTTTTTTTCCCTGCAGGACTGCTAGGGGATAACTTTTTTTTTCCTTTTTTT
AAATAGGGGATGATTTTAGCTTGTCCTAGAACCTGTTGCCCTTCTTGTCAGGGTAGGACATCGC
AAATGAATAAAATGCTCGCACCTCCTCTTGAATTTATCCCCAAGAAAACCATCTTATCCATATA
AATAAATCAGCATGTATTTATTGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038282694	(Get FASTA)	NCBI Sequence Viewer
	XP_038358503	(Get FASTA)	NCBI Sequence Viewer
	XP_038421412	(Get FASTA)	NCBI Sequence Viewer
	XP_038485534	(Get FASTA)	NCBI Sequence Viewer
	XP_533723	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000006404.4
	ENSCAFP00000061285.2
	ENSCAFP00000072948.1
	ENSCAFP00000075181.1
	ENSCAFP00030022762.1
	ENSCAFP00040042416.1
	ENSCAFP00040042422.1
	ENSCAFP00845027569.1
	ENSCAFP00845027677
	ENSCAFP00845027677.1
	ENSCAFP00845027832.1
	ENSCAFP00845027942.1

RefSeq Acc Id:

XP_533723 ⟸ XM_533723

- UniProtKB:

A0A8I3S1L8 (UniProtKB/TrEMBL), A0A8P0PNE1 (UniProtKB/TrEMBL), A0A8C0Z7D6 (UniProtKB/TrEMBL), A0A8C0JUV8 (UniProtKB/TrEMBL), A0A8I3PC55 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEHLGTT
EATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRAL
CQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMV
QYHALGLLYHVRKNDRLAVNKMISKFTRHGLKSPFAYCMMIRVASKQLEEEDGSRDSPLFDFIE
SCLRNKHEMVVYEAASAIVNLPGCSAKELAPAVSVLQLFCSSPKAALRYAAVRTLNKVAMKHPS
AVTACNLDLENLVTDSNRSIATLAITTLLKTGSESSIDRLMKQISSFMSEISDEFKVVVVQAIS
ALCQKYPRKHAVLMNFLFTMLREEGGFEYKRAIVDCIISIIEENTESKETGLSHLCEFIEDCEF
TVLATRILHLLGQEGPKTNNPSKYIRFIYNRVVLEHEEVRAGAVSALAKFGAQNEEMLPSILVL
LKRCVMDDDNEVRDRATFYLNVLEQKQKALNAGYILNGLTVSIPGLERALQQYTLEPSEKPFDL
KSVPLATTPMAEQRTESTPITAAKQPEKVAATRQEIFQEQLAAVPEFHGLGPLFKSSPEPVALT
ESETEYVIRCTKHTFTDHMVFQFDCTNTLNDQTLENVTVQMEPTEAYEVVSYVPARSLPYNQPG
TCYTLVSLPKEDPTAVACTFSCMMKFTVKDCDPTTGETDDEGYEDEYVLEDLEITVADHIQKVM
KLNFEAAWDEVGDEFEKEETFTLSTIKTLEEAVGNIVKFLGMHPCERSDKVPDNKNTHTLLLAG
VFRGGHDILVRSRLLLLDTVTMQVTARSSEELPVDIILASVG

hide sequence

Ensembl Acc Id:

ENSCAFP00000061285 ⟸ ENSCAFT00000082356

Ensembl Acc Id:

ENSCAFP00000006404 ⟸ ENSCAFT00000006920

RefSeq Acc Id:

XP_038358503 ⟸ XM_038502575

RefSeq Acc Id:

XP_038485534 ⟸ XM_038629606

RefSeq Acc Id:	XP_038282694 ⟸ XM_038426766
- UniProtKB:	A0A8I3S1L8 (UniProtKB/TrEMBL), A0A8P0PNE1 (UniProtKB/TrEMBL), A0A8C0Z7D6 (UniProtKB/TrEMBL), A0A8C0JUV8 (UniProtKB/TrEMBL), A0A8I3PC55 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421412 ⟸ XM_038565484
- UniProtKB:	A0A8C0JUV8 (UniProtKB/TrEMBL), A0A8C0Z7D6 (UniProtKB/TrEMBL), A0A8I3PC55 (UniProtKB/TrEMBL), A0A8I3S1L8 (UniProtKB/TrEMBL), A0A8P0PNE1 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845027942 ⟸ ENSCAFT00845035714

Ensembl Acc Id:

ENSCAFP00845027677 ⟸ ENSCAFT00845035359

Ensembl Acc Id:

ENSCAFP00845027569 ⟸ ENSCAFT00845035221

Ensembl Acc Id:

ENSCAFP00845027832 ⟸ ENSCAFT00845035578

Protein Domains

Clathrin/coatomer adaptor adaptin-like N-terminal Coatomer gamma subunit appendage Ig-like subdomain Coatomer subunit gamma C-terminal

Promoters

RGD ID:

13686759

Promoter ID:

EPDNEW_C4824

Type:

initiation region

Name:

COPG1_1

Description:

coatomer protein complex subunit gamma 1

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	2,860,336 - 2,860,396	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004255	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030014068	UniProtKB/TrEMBL
	ENSCAFG00040025954	UniProtKB/TrEMBL
	ENSCAFG00845019986	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000006920.5	UniProtKB/TrEMBL
	ENSCAFT00000082356.2	UniProtKB/TrEMBL
	ENSCAFT00000106893.1	UniProtKB/TrEMBL
	ENSCAFT00000108024.1	UniProtKB/TrEMBL
	ENSCAFT00030026063.1	UniProtKB/TrEMBL
	ENSCAFT00040048560.1	UniProtKB/TrEMBL
	ENSCAFT00040048566.1	UniProtKB/TrEMBL
	ENSCAFT00845035221.1	UniProtKB/TrEMBL
	ENSCAFT00845035359	ENTREZGENE
	ENSCAFT00845035359.1	UniProtKB/TrEMBL
	ENSCAFT00845035578.1	UniProtKB/TrEMBL
	ENSCAFT00845035714.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
	2.60.40.1480	UniProtKB/TrEMBL
	3.30.310.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Clathrin/coatomer_adapt-like_N	UniProtKB/TrEMBL
	Clathrin_app_Ig-like_sf	UniProtKB/TrEMBL
	Coatomer/calthrin_app_sub_C	UniProtKB/TrEMBL
	Coatomer_g_Cpla	UniProtKB/TrEMBL
	Coatomer_gsu	UniProtKB/TrEMBL
	Coatomer_gsu_app_Ig-like_dom	UniProtKB/TrEMBL
	Coatomer_gsu_app_sf	UniProtKB/TrEMBL
	TBP_dom_sf	UniProtKB/TrEMBL
KEGG Report	cfa:476517	UniProtKB/TrEMBL
NCBI Gene	COPG1	ENTREZGENE
PANTHER	COATOMER SUBUNIT GAMMA-1	UniProtKB/TrEMBL
	PTHR10261	UniProtKB/TrEMBL
Pfam	Adaptin_N	UniProtKB/TrEMBL
	Coatomer_g_Cpla	UniProtKB/TrEMBL
	COP-gamma_platf	UniProtKB/TrEMBL
PIRSF	Coatomer_gamma_subunit	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
	SSF49348	UniProtKB/TrEMBL
	SSF55711	UniProtKB/TrEMBL
UniProt	A0A8C0JUV8	ENTREZGENE
	A0A8C0U099_CANLF	UniProtKB/TrEMBL
	A0A8C0Z7D6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P8V4_CANLF	UniProtKB/TrEMBL
	A0A8I3PBX4_CANLF	UniProtKB/TrEMBL
	A0A8I3PC55	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S1L8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0N762_CANLF	UniProtKB/TrEMBL
	A0A8P0PNE1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0PRI4_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:39507	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-10-08	COPG1	COPI coat complex subunit gamma 1	COPG1	coatomer protein complex subunit gamma 1	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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