GLT8D2 (glycosyltransferase 8 domain containing 2)

Gene: GLT8D2 (glycosyltransferase 8 domain containing 2) Canis lupus familiaris

Analyze

Symbol:

GLT8D2

Name:

glycosyltransferase 8 domain containing 2

RGD ID:

12396804

Description:

ENCODES a protein that exhibits glycosyltransferase activity (inferred); UDP-glycosyltransferase activity (inferred); ASSOCIATED WITH genetic disease (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN Golgi apparatus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

glycosyltransferase 8 domain-containing protein 2

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	42,514,650 - 42,550,888 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	42,493,950 - 42,547,517 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	42,883,064 - 42,920,316 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	43,171,202 - 43,208,508 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	43,174,663 - 43,204,975 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	42,437,301 - 42,474,295 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	42,536,341 - 42,573,581 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	42,807,466 - 42,844,508 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Marfanoid Mental Retardation Syndrome, Autosomal (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

Golgi apparatus (IEA)

Molecular Function

glycosyltransferase activity (IEA)

UDP-glycosyltransferase activity (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

GLT8D2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	42,514,650 - 42,550,888 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	42,493,950 - 42,547,517 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	42,883,064 - 42,920,316 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	43,171,202 - 43,208,508 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	43,174,663 - 43,204,975 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	42,437,301 - 42,474,295 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	42,536,341 - 42,573,581 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	42,807,466 - 42,844,508 (-)	NCBI		UU_Cfam_GSD_1.0

GLT8D2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	103,988,987 - 104,064,437 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	103,988,987 - 104,064,183 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	104,382,765 - 104,458,215 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	102,906,895 - 102,968,045 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	102,885,231 - 102,946,382	NCBI
Celera	12	104,046,524 - 104,107,666 (-)	NCBI		Celera
Cytogenetic Map	12	q23.3	NCBI
HuRef	12	101,442,232 - 101,503,286 (-)	NCBI		HuRef
CHM1_1	12	104,348,682 - 104,409,832 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	103,950,706 - 104,026,130 (-)	NCBI		T2T-CHM13v2.0

Glt8d2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	82,486,262 - 82,529,846 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	82,486,267 - 82,526,484 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	82,650,431 - 82,694,125 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	82,650,433 - 82,690,650 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	82,113,178 - 82,153,395 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	82,080,232 - 82,120,449 (-)	NCBI		MGSCv36	mm8
Celera	10	84,633,367 - 84,675,128 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	39.72	NCBI

Glt8d2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	22,917,055 - 22,968,616 (+)	NCBI		GRCr8
mRatBN7.2	7	21,029,534 - 21,081,081 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	21,029,525 - 21,081,080 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	7	27,146,382 - 27,196,689 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	27,174,882 - 27,192,882 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	27,294,791 - 27,312,854 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	23,265,829 - 23,299,748 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	7	18,210,215 - 18,260,357 (+)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

Glt8d2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	38,680,807 - 38,708,560 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	38,680,302 - 38,708,383 (-)	NCBI	ChiLan1.0	ChiLan1.0

GLT8D2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	112,053,505 - 112,126,569 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	112,049,898 - 112,122,965 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	101,567,144 - 101,640,505 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	104,961,397 - 105,036,590 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	104,961,394 - 105,036,590 (-)	Ensembl	panpan1.1		panPan2

Glt8d2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	17,425,332 - 17,465,956 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936492	10,435,746 - 10,478,468 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936492	10,435,746 - 10,476,400 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GLT8D2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	80,410,372 - 80,473,274 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	80,409,915 - 80,473,964 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	83,991,394 - 84,048,056 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GLT8D2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	99,191,277 - 99,264,533 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	99,188,883 - 99,250,384 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	145,789,662 - 145,814,100 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Glt8d2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	4,673,752 - 4,707,258 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	4,660,491 - 4,707,092 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in GLT8D2
486 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium			11				6		6	8	10	2
Low	5	5	11	6	6	6		5	6			4
Below cutoff								1

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022403440	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022403441	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022403442	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022403443	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496479	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038496481	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558874	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558876	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558877	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688472	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688473	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688474	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038688475	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000011954 ⟹ ENSCAFP00000011085

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	42,517,218 - 42,547,517 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000071478 ⟹ ENSCAFP00000063832

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	42,517,218 - 42,547,280 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00000079463 ⟹ ENSCAFP00000060030

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	42,493,950 - 42,547,280 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845019001 ⟹ ENSCAFP00845014844

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	43,174,663 - 43,204,975 (-)	Ensembl

RefSeq Acc Id:

XM_022403440 ⟹ XP_022259148

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	42,517,415 - 42,547,314 (-)	NCBI
Dog10K_Boxer_Tasha	15	42,886,513 - 42,916,802 (-)	NCBI

Sequence:

show sequence

GTCGGGGGCAGGGGAGGCACACCCTCTTGGAAATGCGATCCTAGCGGTGGGGCTCCCCAACCCA
TGGGGCTCTCCAATGGGACCTTAGAAGCCGCGGAAGCAGCGTGCAGGGCAGCAGCCCAGGCCGC
CGGGGAGGCTAGGAGGCCAGGATCACACTGCCACACGGCTCTTCCGGACGGAGGAGCTCACAGC
CCTGCCTTCACCTGCACCAGGTCACAGTTTTTGTCAGCGTGAACACACATGGCTTTGTTACGAA
AAATTAATCAGGTATTGCTGTTCCTTCTGATTGTGACCCTCTGTGGGATCTTGTATAAGAAAGT
TCACAGGGAGACTGCGCTCAGGAATGAGACAGATGATGACTCTGAGCCTCCTGAGGAGATGGAG
GAGGAGATTCCTGTGGTGATTTGTGCCGCGGCAGGGAGAATGGGTGCTGCCATGGCTGCTATCA
ACAGCATCTACAGCAACACCGACGCCAACATTCTCTTCTATGTGGTTGGACTCCGGAATACTCT
GTCTCGAATCCGAAAATGGATTGAACATTCTAAACTAAGAGAAATAAACTTTAAAATCGTGGAA
TTCAACCCTGTAGTCCTCAAAGGGAAGATCAGACCAGACTCGTCAAGGCCTGAATTGCTCCAGC
CTCTGAATTTTGTTCGATTTTATCTCCCTCTGCTTATTCATCAACATGAGAAAGTCATCTATTT
GGACGATGACGTAATTGTGCAAGGTATACTCGCCGACTGCCAAGAACACTCGGAAAAGGAGCAG
CTGATAAGTGATATCCAAGAACTCTACGACACCACCTTGGCCCTGGGCCACGCAGCAGCTTTCT
CCGATGACTGTGATTTGCCCTCCGCTCAGGACATGAACAGATTTGTGGGGCTGCAGAACACGTA
CATGGGCTACCTAGACTACAGGAAGAAGGCGATAAAGGACCTTGGCATAAGCCCCAGCACTTGC
TCCTTCAATCCGGGTGTGATTGTGGCCAACATGACAGAATGGAAGCACCAGCGCATCACCAAAC
AGCTGGAGAAATGGATGCAAAAGAATGTGGAGGAAAATCTCTACAGCAGCTCCCTGGGAGGAGG
GGTGGCCACCTCCCCCATGCTGATTGTGTTTCATGGGAAATACTCCGCAATCAACCCCCTGTGG
CACATAAGGCACCTGGGCTGGAATCCAGATACCAGATATTCAGAGCATTTTCTGCAGGAAGCAA
AATTACTCCACTGGAATGGAAGACATAAACCTTGGGACTTCCCTAGTGTTCACAATGACTTATG
GGAAAGCTGGTTTGTTCCTGACCCTGCAGGGATATTTAAACTCCATCACCACAATAGCTGATAT
GACTTGACATTTCAAGTATTTCCTATATAAAAAATGTGGAATTGTGCA

hide sequence

RefSeq Acc Id:

XM_022403441 ⟹ XP_022259149

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	42,517,415 - 42,550,888 (-)	NCBI
Dog10K_Boxer_Tasha	15	42,886,513 - 42,920,316 (-)	NCBI

Sequence:

show sequence

TATCTTGAAGAGGGTTGTCTTCATCCAACAGTAAAAATACAGTAGTCCCCTCCCCCCCCTTATT
GGCAGTTTCGCTTCTGAGGATTCTGTTACCCTTGGTCAGCCATAGTCAGGAAGTGGAATATCTG
CCTTCTGACGATGGATGGTCAGAAGACGATGTAGCCGAACACTGCGTCATAATGCCGGCGTCAT
TCGTGTCACTTTGTCCACTTCATGTCATCACGTAGGCATTTTGTCATCTCACATCATCACAAGA
AGGGTCACAGTTTTTGTCAGCGTGAACACACATGGCTTTGTTACGAAAAATTAATCAGGTATTG
CTGTTCCTTCTGATTGTGACCCTCTGTGGGATCTTGTATAAGAAAGTTCACAGGGAGACTGCGC
TCAGGAATGAGACAGATGATGACTCTGAGCCTCCTGAGGAGATGGAGGAGGAGATTCCTGTGGT
GATTTGTGCCGCGGCAGGGAGAATGGGTGCTGCCATGGCTGCTATCAACAGCATCTACAGCAAC
ACCGACGCCAACATTCTCTTCTATGTGGTTGGACTCCGGAATACTCTGTCTCGAATCCGAAAAT
GGATTGAACATTCTAAACTAAGAGAAATAAACTTTAAAATCGTGGAATTCAACCCTGTAGTCCT
CAAAGGGAAGATCAGACCAGACTCGTCAAGGCCTGAATTGCTCCAGCCTCTGAATTTTGTTCGA
TTTTATCTCCCTCTGCTTATTCATCAACATGAGAAAGTCATCTATTTGGACGATGACGTAATTG
TGCAAGGTATACTCGCCGACTGCCAAGAACACTCGGAAAAGGAGCAGCTGATAAGTGATATCCA
AGAACTCTACGACACCACCTTGGCCCTGGGCCACGCAGCAGCTTTCTCCGATGACTGTGATTTG
CCCTCCGCTCAGGACATGAACAGATTTGTGGGGCTGCAGAACACGTACATGGGCTACCTAGACT
ACAGGAAGAAGGCGATAAAGGACCTTGGCATAAGCCCCAGCACTTGCTCCTTCAATCCGGGTGT
GATTGTGGCCAACATGACAGAATGGAAGCACCAGCGCATCACCAAACAGCTGGAGAAATGGATG
CAAAAGAATGTGGAGGAAAATCTCTACAGCAGCTCCCTGGGAGGAGGGGTGGCCACCTCCCCCA
TGCTGATTGTGTTTCATGGGAAATACTCCGCAATCAACCCCCTGTGGCACATAAGGCACCTGGG
CTGGAATCCAGATACCAGATATTCAGAGCATTTTCTGCAGGAAGCAAAATTACTCCACTGGAAT
GGAAGACATAAACCTTGGGACTTCCCTAGTGTTCACAATGACTTATGGGAAAGCTGGTTTGTTC
CTGACCCTGCAGGGATATTTAAACTCCATCACCACAATAGCTGATATGACTTGACATTTCAAGT
ATTTCCTATATAAAAAATGTGGAATTGTGCA

hide sequence

RefSeq Acc Id:

XM_022403442 ⟹ XP_022259150

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	42,517,415 - 42,547,280 (-)	NCBI
Dog10K_Boxer_Tasha	15	42,886,513 - 42,916,768 (-)	NCBI

Sequence:

show sequence

GCGATCCTAGCGGTGGGGCTCCCCAACCCATGGGGCTCTCCAATGGGACCTTAGAAGCCGCGGA
AGCAGCGTGCAGGGCAGCAGCCCAGGCCGCCGGGGAGGCTAGGAGGCCAGGATCACACTGCCAC
ACGGCTCTTCCGGACGGAGGAGCTCACAGCCCTGCCTTCACCTGCACCAGGTCACAGTTTTTGT
CAGCGTGAACACACATGGCTTTGTTACGAAAAATTAATCAGGTATTGCTGTTCCTTCTGATTGT
GACCCTCTGTGGGATCTTGTATAAGAAAGTTCACAGGGAGACTGCGCTCAGGAATGAGACAGAT
GATGACTCTGAGCCTCCTGAGGAGATGGAGGAGGAGATTCCTGTGGTGATTTGTGCCGCGGCAG
GGAGAATGGGTGCTGCCATGGCTGCTATCAACAGCATCTACAGCAACACCGACGCCAACATTCT
CTTCTATGTGGTTGGACTCCGGAATACTCTGTCTCGAATCCGAAAATGGATTGAACATTCTAAA
CTAAGAGAAATAAACTTTAAAATCGTGGAATTCAACCCTGTAGTCCTCAAAGGGAAGATCAGAC
CAGACTCGTCAAGGCCTGAATTGCTCCAGCCTCTGAATTTTGTTCGATTTTATCTCCCTCTGCT
TATTCATCAACATGAGAAAGTCATCTATTTGGACGATGACGTAATTGTGCAAGGTGATATCCAA
GAACTCTACGACACCACCTTGGCCCTGGGCCACGCAGCAGCTTTCTCCGATGACTGTGATTTGC
CCTCCGCTCAGGACATGAACAGATTTGTGGGGCTGCAGAACACGTACATGGGCTACCTAGACTA
CAGGAAGAAGGCGATAAAGGACCTTGGCATAAGCCCCAGCACTTGCTCCTTCAATCCGGGTGTG
ATTGTGGCCAACATGACAGAATGGAAGCACCAGCGCATCACCAAACAGCTGGAGAAATGGATGC
AAAAGAATGTGGAGGAAAATCTCTACAGCAGCTCCCTGGGAGGAGGGGTGGCCACCTCCCCCAT
GCTGATTGTGTTTCATGGGAAATACTCCGCAATCAACCCCCTGTGGCACATAAGGCACCTGGGC
TGGAATCCAGATACCAGATATTCAGAGCATTTTCTGCAGGAAGCAAAATTACTCCACTGGAATG
GAAGACATAAACCTTGGGACTTCCCTAGTGTTCACAATGACTTATGGGAAAGCTGGTTTGTTCC
TGACCCTGCAGGGATATTTAAACTCCATCACCACAATAGCTGATATGACTTGACATTTCAAGTA
TTTCCTATATAAAAAATGTGGAATTGTGCA

hide sequence

RefSeq Acc Id:

XM_022403443 ⟹ XP_022259151

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	42,514,650 - 42,547,280 (-)	NCBI
Dog10K_Boxer_Tasha	15	42,883,064 - 42,916,768 (-)	NCBI

Sequence:

show sequence

GCGATCCTAGCGGTGGGGCTCCCCAACCCATGGGGCTCTCCAATGGGACCTTAGAAGCCGCGGA
AGCAGCGTGCAGGGCAGCAGCCCAGGCCGCCGGGGAGGCTAGGAGGCCAGGATCACACTGCCAC
ACGGCTCTTCCGGACGGAGGAGCTCACAGCCCTGCCTTCACCTGCACCAGGTCACAGTTTTTGT
CAGCGTGAACACACATGGCTTTGTTACGAAAAATTAATCAGGTATTGCTGTTCCTTCTGATTGT
GACCCTCTGTGGGATCTTGTATAAGAAAGTTCACAGGGAGACTGCGCTCAGGAATGAGACAGAT
GATGACTCTGAGCCTCCTGAGGAGATGGAGGAGGAGATTCCTGTGGTGATTTGTGCCGCGGCAG
GGAGAATGGGTGCTGCCATGGCTGCTATCAACAGCATCTACAGCAACACCGACGCCAACATTCT
CTTCTATGTGGTTGGACTCCGGAATACTCTGTCTCGAATCCGAAAATGGATTGAACATTCTAAA
CTAAGAGAAATAAACTTTAAAATCGTGGAATTCAACCCTGTAGTCCTCAAAGGGAAGATCAGAC
CAGACTCGTCAAGGCCTGAATTGCTCCAGCCTCTGAATTTTGTTCGATTTTATCTCCCTCTGCT
TATTCATCAACATGAGAAAGTCATCTATTTGGACGATGACGTAATTGTGCAAGGTATACTCGCC
GACTGCCAAGAACACTCGGAAAAGGAGCAGCTGATAAGTGATATCCAAGAACTCTACGACACCA
CCTTGGCCCTGGGCCACGCAGCAGCTTTCTCCGATGACTGTGATTTGCCCTCCGCTCAGGACAT
GAACAGATTTGTGGGGCTGCAGAACACGTACATGGGCTACCTAGACTACAGGAAGAAGGCGATA
AAGGACCTTGGCATAAGCCCCAGCACTTGCTCCTTCAATCCGGGTGTGATTGTGGCCAACATGA
CAGAATGGAAGCACCAGCGCATCACCAAACAGCTGGAGAAATGGATGCAAAAGAATGTGGAGGA
AAATCTCTACAGCAGCTCCCTGGGAGGAGGGGTGGCCACCTCCCCCATGCTGATTGTGTTTCAT
GGGAAATACTCCGCAATCAACCCCCTGTGGCACATAAGGCACCTGGATACAGGACTTCACAGAG
GGACTGTGAATGGGATGACTCGCTAACTTAGAGAGAATGAGCTGGCCACACATGTGTGGCGGGA
CATCAGATAACCACTGTATTTCCATTACTGGCCACTACAGATTTTCAGTGCCATTCCTACACTT
CAATAATTCTCTCTCTTAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_038496478 ⟹ XP_038352406

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	42,440,743 - 42,470,793 (-)	NCBI

RefSeq Acc Id:

XM_038496479 ⟹ XP_038352407

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	42,440,743 - 42,474,295 (-)	NCBI

RefSeq Acc Id:

XM_038496480 ⟹ XP_038352408

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	42,440,743 - 42,470,759 (-)	NCBI

RefSeq Acc Id:

XM_038496481 ⟹ XP_038352409

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	42,437,301 - 42,470,759 (-)	NCBI

RefSeq Acc Id:

XM_038558874 ⟹ XP_038414802

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	42,810,910 - 42,840,995 (-)	NCBI

RefSeq Acc Id:

XM_038558875 ⟹ XP_038414803

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	42,810,910 - 42,844,508 (-)	NCBI

RefSeq Acc Id:

XM_038558876 ⟹ XP_038414804

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	42,810,910 - 42,840,961 (-)	NCBI

RefSeq Acc Id:

XM_038558877 ⟹ XP_038414805

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	42,807,466 - 42,840,961 (-)	NCBI

RefSeq Acc Id:

XM_038622798 ⟹ XP_038478726

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	42,539,792 - 42,570,068 (-)	NCBI

RefSeq Acc Id:

XM_038622799 ⟹ XP_038478727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	42,539,792 - 42,573,581 (-)	NCBI

RefSeq Acc Id:

XM_038622800 ⟹ XP_038478728

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	42,539,792 - 42,570,034 (-)	NCBI

RefSeq Acc Id:

XM_038622801 ⟹ XP_038478729

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	42,536,341 - 42,570,034 (-)	NCBI

RefSeq Acc Id:

XM_038688472 ⟹ XP_038544400

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	43,174,654 - 43,204,995 (-)	NCBI

RefSeq Acc Id:

XM_038688473 ⟹ XP_038544401

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	43,174,654 - 43,208,508 (-)	NCBI

RefSeq Acc Id:

XM_038688474 ⟹ XP_038544402

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	43,174,654 - 43,204,961 (-)	NCBI

RefSeq Acc Id:

XM_038688475 ⟹ XP_038544403

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	43,171,202 - 43,204,961 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022259148	(Get FASTA)	NCBI Sequence Viewer
	XP_022259149	(Get FASTA)	NCBI Sequence Viewer
	XP_022259150	(Get FASTA)	NCBI Sequence Viewer
	XP_022259151	(Get FASTA)	NCBI Sequence Viewer
	XP_038352406	(Get FASTA)	NCBI Sequence Viewer
	XP_038352407	(Get FASTA)	NCBI Sequence Viewer
	XP_038352408	(Get FASTA)	NCBI Sequence Viewer
	XP_038352409	(Get FASTA)	NCBI Sequence Viewer
	XP_038414802	(Get FASTA)	NCBI Sequence Viewer
	XP_038414803	(Get FASTA)	NCBI Sequence Viewer
	XP_038414804	(Get FASTA)	NCBI Sequence Viewer
	XP_038414805	(Get FASTA)	NCBI Sequence Viewer
	XP_038478726	(Get FASTA)	NCBI Sequence Viewer
	XP_038478727	(Get FASTA)	NCBI Sequence Viewer
	XP_038478728	(Get FASTA)	NCBI Sequence Viewer
	XP_038478729	(Get FASTA)	NCBI Sequence Viewer
	XP_038544400	(Get FASTA)	NCBI Sequence Viewer
	XP_038544401	(Get FASTA)	NCBI Sequence Viewer
	XP_038544402	(Get FASTA)	NCBI Sequence Viewer
	XP_038544403	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000063832.1
	ENSCAFP00030014241.1
	ENSCAFP00040035921.1
	ENSCAFP00040035950.1
	ENSCAFP00040035994.1
	ENSCAFP00845014844
	ENSCAFP00845014844.1

RefSeq Acc Id:	XP_022259151 ⟸ XM_022403443
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLRKINQVLLFLLIVTLCGILYKKVHRETALRNETDDDSEPPEEMEEEIPVVICAAAGRMGA AMAAINSIYSNTDANILFYVVGLRNTLSRIRKWIEHSKLREINFKIVEFNPVVLKGKIRPDSSR PELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGILADCQEHSEKEQLISDIQELYDTTLALG HAAAFSDDCDLPSAQDMNRFVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKH QRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSAINPLWHIRHLDTGLHRGTVNG MTR hide sequence

RefSeq Acc Id:	XP_022259149 ⟸ XM_022403441
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLRKINQVLLFLLIVTLCGILYKKVHRETALRNETDDDSEPPEEMEEEIPVVICAAAGRMGA AMAAINSIYSNTDANILFYVVGLRNTLSRIRKWIEHSKLREINFKIVEFNPVVLKGKIRPDSSR PELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGILADCQEHSEKEQLISDIQELYDTTLALG HAAAFSDDCDLPSAQDMNRFVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKH QRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSAINPLWHIRHLGWNPDTRYSEH FLQEAKLLHWNGRHKPWDFPSVHNDLWESWFVPDPAGIFKLHHHNS hide sequence

RefSeq Acc Id:	XP_022259148 ⟸ XM_022403440
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLRKINQVLLFLLIVTLCGILYKKVHRETALRNETDDDSEPPEEMEEEIPVVICAAAGRMGA AMAAINSIYSNTDANILFYVVGLRNTLSRIRKWIEHSKLREINFKIVEFNPVVLKGKIRPDSSR PELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGILADCQEHSEKEQLISDIQELYDTTLALG HAAAFSDDCDLPSAQDMNRFVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKH QRITKQLEKWMQKNVEENLYSSSLGGGVATSPMLIVFHGKYSAINPLWHIRHLGWNPDTRYSEH FLQEAKLLHWNGRHKPWDFPSVHNDLWESWFVPDPAGIFKLHHHNS hide sequence

RefSeq Acc Id:	XP_022259150 ⟸ XM_022403442
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MSN7 (UniProtKB/TrEMBL), A0A8C0LPU0 (UniProtKB/TrEMBL), A0A8I3NIC5 (UniProtKB/TrEMBL), A0A8C0LM07 (UniProtKB/TrEMBL)
- Sequence:	show sequence MALLRKINQVLLFLLIVTLCGILYKKVHRETALRNETDDDSEPPEEMEEEIPVVICAAAGRMGA AMAAINSIYSNTDANILFYVVGLRNTLSRIRKWIEHSKLREINFKIVEFNPVVLKGKIRPDSSR PELLQPLNFVRFYLPLLIHQHEKVIYLDDDVIVQGDIQELYDTTLALGHAAAFSDDCDLPSAQD MNRFVGLQNTYMGYLDYRKKAIKDLGISPSTCSFNPGVIVANMTEWKHQRITKQLEKWMQKNVE ENLYSSSLGGGVATSPMLIVFHGKYSAINPLWHIRHLGWNPDTRYSEHFLQEAKLLHWNGRHKP WDFPSVHNDLWESWFVPDPAGIFKLHHHNS hide sequence

RefSeq Acc Id:

ENSCAFP00000011085 ⟸ ENSCAFT00000011954

RefSeq Acc Id:

ENSCAFP00000060030 ⟸ ENSCAFT00000079463

RefSeq Acc Id:

ENSCAFP00000063832 ⟸ ENSCAFT00000071478

RefSeq Acc Id:	XP_038352409 ⟸ XM_038496481
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038352407 ⟸ XM_038496479
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038352406 ⟸ XM_038496478
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038352408 ⟸ XM_038496480
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038478729 ⟸ XM_038622801
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038478727 ⟸ XM_038622799
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038478726 ⟸ XM_038622798
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038478728 ⟸ XM_038622800
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038544403 ⟸ XM_038688475
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544401 ⟸ XM_038688473
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544400 ⟸ XM_038688472
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038544402 ⟸ XM_038688474
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0MSN7 (UniProtKB/TrEMBL), A0A8C0LPU0 (UniProtKB/TrEMBL), A0A8I3NIC5 (UniProtKB/TrEMBL), A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414805 ⟸ XM_038558877
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414803 ⟸ XM_038558875
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414802 ⟸ XM_038558874
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414804 ⟸ XM_038558876
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0LM07 (UniProtKB/TrEMBL), A0A8C0LPU0 (UniProtKB/TrEMBL), A0A8C0MSN7 (UniProtKB/TrEMBL), A0A8I3NIC5 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845014844 ⟸ ENSCAFT00845019001

Promoters

RGD ID:

13685984

Promoter ID:

EPDNEW_C4052

Type:

initiation region

Name:

GLT8D2_1

Description:

glycosyltransferase 8 domain containing 2

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	42,547,296 - 42,547,356	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000007456	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030008841	UniProtKB/TrEMBL
	ENSCAFG00040022193	UniProtKB/TrEMBL
	ENSCAFG00845010772	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000071478.2	UniProtKB/TrEMBL
	ENSCAFT00030016311.1	UniProtKB/TrEMBL
	ENSCAFT00040041196.1	UniProtKB/TrEMBL
	ENSCAFT00040041221.1	UniProtKB/TrEMBL
	ENSCAFT00040041274.1	UniProtKB/TrEMBL
	ENSCAFT00845019001	ENTREZGENE
	ENSCAFT00845019001.1	UniProtKB/TrEMBL
InterPro	Glyco_trans_8	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
NCBI Gene	GLT8D2	ENTREZGENE
PANTHER	GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN	UniProtKB/TrEMBL
	GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 2	UniProtKB/TrEMBL
Pfam	Glyco_transf_8	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A0A8C0LM07	ENTREZGENE
	A0A8C0LPU0	ENTREZGENE
	A0A8C0MSN7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TID1_CANLF	UniProtKB/TrEMBL
	A0A8C0TIJ7_CANLF	UniProtKB/TrEMBL
	A0A8I3NIC5	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41281	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Send us a Message

Imported Disease Annotations - ClinVar