SEC63 (SEC63 homolog, protein translocation regulator) - Rat Genome Database

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Gene: SEC63 (SEC63 homolog, protein translocation regulator) Canis lupus familiaris
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Symbol: SEC63
Name: SEC63 homolog, protein translocation regulator
RGD ID: 12392574
Description: INVOLVED IN liver development (ortholog); multicellular organism aging (ortholog); nitrogen compound metabolic process (ortholog); ASSOCIATED WITH familial juvenile hyperuricemic nephropathy (ortholog); polycystic kidney disease (ortholog); Polycystic Liver Disease 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOW QUALITY PROTEIN: translocation protein SEC63 homolog; SEC63L; Translocation protein SEC63 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11264,983,442 - 65,028,573 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1264,770,434 - 64,844,883 (-)NCBI
ROS_Cfam_1.01265,829,612 - 65,904,228 (-)NCBI
UMICH_Zoey_3.11265,185,870 - 65,260,323 (-)NCBI
UNSW_CanFamBas_1.01265,031,615 - 65,106,070 (-)NCBI
UU_Cfam_GSD_1.01265,305,260 - 65,379,711 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
SEC63
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11264,983,442 - 65,028,573 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1264,770,434 - 64,844,883 (-)NCBI
ROS_Cfam_1.01265,829,612 - 65,904,228 (-)NCBI
UMICH_Zoey_3.11265,185,870 - 65,260,323 (-)NCBI
UNSW_CanFamBas_1.01265,031,615 - 65,106,070 (-)NCBI
UU_Cfam_GSD_1.01265,305,260 - 65,379,711 (-)NCBI
SEC63
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl6107,867,756 - 107,958,208 (-)EnsemblGRCh38hg38GRCh38
GRCh386107,867,756 - 107,958,208 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh376108,188,960 - 108,279,412 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366108,298,215 - 108,386,086 (-)NCBINCBI36hg18NCBI36
Build 346108,298,214 - 108,386,086NCBI
Celera6108,935,760 - 109,025,964 (-)NCBI
Cytogenetic Map6q21NCBI
HuRef6105,758,265 - 105,848,248 (-)NCBIHuRef
CHM1_16108,451,504 - 108,542,131 (-)NCBICHM1_1
Sec63
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391042,637,492 - 42,708,510 (+)NCBIGRCm39mm39
GRCm39 Ensembl1042,637,492 - 42,708,510 (+)Ensembl
GRCm381042,761,496 - 42,832,514 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1042,761,496 - 42,832,514 (+)EnsemblGRCm38mm10GRCm38
MGSCv371042,481,302 - 42,552,320 (+)NCBIGRCm37mm9NCBIm37
MGSCv361042,450,141 - 42,517,702 (+)NCBImm8
Celera1043,628,635 - 43,699,289 (+)NCBICelera
Cytogenetic Map10B2NCBI
cM Map1022.89NCBI
Sec63
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22046,245,101 - 46,314,055 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl2046,245,101 - 46,314,055 (+)Ensembl
Rnor_6.02047,494,270 - 47,563,222 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2047,494,270 - 47,563,222 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02049,156,193 - 49,225,366 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42046,669,125 - 46,738,077 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12046,693,553 - 46,762,289 (+)NCBI
Celera2053,663,315 - 53,732,035 (-)NCBICelera
Cytogenetic Map20q13NCBI
Sec63
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541133,063,989 - 33,126,105 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541133,063,056 - 33,126,325 (-)NCBIChiLan1.0ChiLan1.0
SEC63
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.16109,536,790 - 109,620,748 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6109,538,184 - 109,595,518 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v06105,673,265 - 105,757,422 (-)NCBIMhudiblu_PPA_v0panPan3
Sec63
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494699,904,722 - 99,947,041 (-)NCBI
SpeTri2.0NW_0049365644,182,330 - 4,221,927 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEC63
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl174,000,684 - 74,078,582 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1174,003,428 - 74,078,605 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2183,274,127 - 83,349,307 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SEC63
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11365,902,796 - 65,993,092 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1365,902,956 - 65,996,514 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604038,236,474 - 38,324,301 (+)NCBIVero_WHO_p1.0
Sec63
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478014,322,651 - 14,405,674 (+)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_038492560   ⟹   XP_038348488
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11265,185,870 - 65,260,323 (-)NCBI
RefSeq Acc Id: XM_038554873   ⟹   XP_038410801
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01265,305,260 - 65,379,711 (-)NCBI
RefSeq Acc Id: XM_038618746   ⟹   XP_038474674
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01265,031,615 - 65,106,070 (-)NCBI
RefSeq Acc Id: XM_038675982   ⟹   XP_038531910
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1264,770,434 - 64,844,883 (-)NCBI
RefSeq Acc Id: XM_038684307   ⟹   XP_038540235
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01265,829,612 - 65,904,228 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_038348488   ⟸   XM_038492560
RefSeq Acc Id: XP_038474674   ⟸   XM_038618746
RefSeq Acc Id: XP_038540235   ⟸   XM_038684307
RefSeq Acc Id: XP_038531910   ⟸   XM_038675982
RefSeq Acc Id: XP_038410801   ⟸   XM_038554873


Additional Information

Database Acc Id Source(s)
NCBI Gene SEC63 ENTREZGENE
UniProt P82008 ENTREZGENE