AS3MT (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 28 | 15,334,141 - 15,350,749 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 28 | 15,503,892 - 15,522,525 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 28 | 15,806,818 - 15,825,455 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 28 | 15,788,533 - 15,990,025 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 28 | 15,350,453 - 15,369,076 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 28 | 15,389,645 - 15,408,259 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 28 | 15,522,659 - 15,541,286 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
AS3MT (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 10 | 102,869,470 - 102,901,899 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 10 | 102,869,470 - 102,901,899 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 10 | 104,629,227 - 104,661,656 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 10 | 104,619,200 - 104,651,646 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 10 | 104,619,262 - 104,651,643 | NCBI | | | | | Celera | 10 | 98,369,790 - 98,401,891 (+) | NCBI | | Celera | | | Cytogenetic Map | 10 | q24.32 | NCBI | | | | | HuRef | 10 | 98,263,978 - 98,296,045 (+) | NCBI | | HuRef | | | CHM1_1 | 10 | 104,912,421 - 104,944,505 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 10 | 103,755,254 - 103,787,669 (+) | NCBI | | T2T-CHM13v2.0 | | |
|
As3mt (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 19 | 46,695,124 - 46,729,538 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 19 | 46,695,897 - 46,729,538 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 19 | 46,707,157 - 46,741,099 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 19 | 46,707,458 - 46,741,099 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 19 | 46,781,933 - 46,815,585 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 19 | 46,760,784 - 46,794,383 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 19 | 47,477,252 - 47,510,537 (+) | NCBI | | Celera | | | Cytogenetic Map | 19 | C3 | NCBI | | | | | cM Map | 19 | 38.97 | NCBI | | | | |
|
As3mt (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 1 | 255,536,879 - 255,569,245 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 1 | 245,595,939 - 245,628,921 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 1 | 245,596,108 - 245,627,872 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 1 | 253,723,062 - 253,755,177 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 1 | 260,417,406 - 260,449,225 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 1 | 253,065,883 - 253,097,650 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 1 | 266,482,787 - 266,514,570 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 1 | 266,482,858 - 266,514,569 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 1 | 273,913,062 - 273,945,394 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 1 | 252,029,638 - 252,061,352 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 1 | 252,292,792 - 252,324,506 (+) | NCBI | | | | | Celera | 1 | 241,368,780 - 241,399,852 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | q54 | NCBI | | | | |
|
As3mt (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955485 | 7,575,580 - 7,599,559 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955485 | 7,576,627 - 7,599,005 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
AS3MT (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 8 | 114,754,257 - 114,788,919 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 10 | 114,759,814 - 114,794,242 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 10 | 99,470,026 - 99,502,829 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 10 | 102,933,503 - 102,964,692 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 10 | 102,933,671 - 102,964,692 (+) | Ensembl | panpan1.1 | | panPan2 | |
|
As3mt (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024407213 | 31,447,159 - 31,466,576 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936600 | 3,051,129 - 3,069,690 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936600 | 3,050,946 - 3,069,786 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
AS3MT (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 14 | 113,847,859 - 113,869,507 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 14 | 113,844,107 - 113,867,880 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 14 | 123,816,442 - 123,853,246 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
AS3MT (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 9 | 95,911,465 - 95,939,554 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 9 | 95,912,086 - 95,939,375 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666048 | 57,023,327 - 57,052,295 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
|