DCAF17 (DDB1 and CUL4 associated factor 17)

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Gene: DCAF17 (DDB1 and CUL4 associated factor 17) Canis lupus familiaris

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Symbol:

DCAF17

Name:

DDB1 and CUL4 associated factor 17

RGD ID:

12391143

Description:

INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Alopecia, Hypogonadism, Extrapyramidal Disorder (ortholog); genetic disease (ortholog); neurodegeneration with brain iron accumulation (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (inferred); cytosol (inferred); nucleoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DDB1- and CUL4-associated factor 17

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	15,906,013 - 15,961,318 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	15,905,085 - 15,938,910 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	15,916,018 - 15,971,351 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	16,028,948 - 16,084,543 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	16,028,932 - 16,061,492 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	16,114,642 - 16,170,201 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	16,114,447 - 16,170,005 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	16,217,139 - 16,272,033 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Alopecia, Hypogonadism, Extrapyramidal Disorder (ISO)

genetic disease (ISO)

neurodegeneration with brain iron accumulation (ISO)

split hand-foot malformation 5 (ISO)

Woodhouse-Sakati syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

acrosome assembly (ISO)

cell morphogenesis (ISO)

protein ubiquitination (IEA)

spermatogenesis (ISO)

Cellular Component

Cul4-RING E3 ubiquitin ligase complex (IEA)

cytosol (IEA)

nucleoplasm (IEA)

Molecular Function

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

DCAF17
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	36	15,906,013 - 15,961,318 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	36	15,905,085 - 15,938,910 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	36	15,916,018 - 15,971,351 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	36	16,028,948 - 16,084,543 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	36	16,028,932 - 16,061,492 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	36	16,114,642 - 16,170,201 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	36	16,114,447 - 16,170,005 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	36	16,217,139 - 16,272,033 (+)	NCBI		UU_Cfam_GSD_1.0

DCAF17
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	171,434,226 - 171,485,052 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	171,434,217 - 171,485,052 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	172,290,736 - 172,341,562 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	171,999,105 - 172,049,808 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	165,907,349 - 165,958,150 (+)	NCBI		Celera
Cytogenetic Map	2	q31.1	NCBI
HuRef	2	164,176,253 - 164,227,023 (+)	NCBI		HuRef
CHM1_1	2	172,297,542 - 172,348,338 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	2	171,911,366 - 171,962,182 (+)	NCBI		T2T-CHM13v2.0

Dcaf17
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	70,886,086 - 70,946,796 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	70,885,672 - 70,929,486 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	71,055,742 - 71,116,412 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	71,055,328 - 71,099,142 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	70,893,801 - 70,937,199 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	70,856,691 - 70,889,483 (+)	NCBI		MGSCv36	mm8
Celera	2	72,724,424 - 72,763,482 (+)	NCBI		Celera
Cytogenetic Map	2	C2	NCBI
cM Map	2	42.38	NCBI

Dcaf17
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	76,271,503 - 76,303,321 (+)	NCBI		GRCr8
mRatBN7.2	3	55,863,776 - 55,895,601 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	55,863,799 - 55,891,820 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	59,261,818 - 59,293,457 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	67,845,387 - 67,877,032 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	65,607,633 - 65,639,102 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	57,646,799 - 57,678,802 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	57,646,811 - 57,673,418 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	64,142,519 - 64,174,461 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	53,310,544 - 53,336,761 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	55,411,964 - 55,436,830 (+)	NCBI		Celera
Cytogenetic Map	3	q22	NCBI

Dcaf17
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955449	3,428,888 - 3,458,377 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955449	3,428,311 - 3,458,723 (-)	NCBI	ChiLan1.0	ChiLan1.0

DCAF17
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	74,113,289 - 74,164,109 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	74,128,262 - 74,179,082 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	58,725,392 - 58,776,238 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	176,183,963 - 176,234,825 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	176,184,348 - 176,234,825 (+)	Ensembl	panpan1.1		panPan2

Dcaf17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	133,124,803 - 133,164,396 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936509	1,678,988 - 1,720,418 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936509	1,678,831 - 1,716,856 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DCAF17
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	77,564,646 - 77,603,620 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	77,564,629 - 77,603,913 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	86,947,903 - 86,983,620 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DCAF17
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	56,951,181 - 56,998,540 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	56,951,351 - 56,997,487 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	142,537,905 - 142,594,954 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dcaf17
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624787	8,857,462 - 8,898,628 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624787	8,858,001 - 8,898,481 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in DCAF17
653 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022414846	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022414847	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447031	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447032	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447033	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521107	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521108	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038521109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038584811	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038584812	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038584813	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038589136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038589137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038589138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_846572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010001230	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000082	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000036	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000020096 ⟹ ENSCAFP00000018638

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	36	15,905,085 - 15,938,910 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000087772 ⟹ ENSCAFP00000057610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	36	15,905,085 - 15,938,910 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048221 ⟹ ENSCAFP00845037823

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	36	16,028,932 - 16,061,492 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048280 ⟹ ENSCAFP00845037870

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	36	16,028,932 - 16,061,492 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845048315 ⟹ ENSCAFP00845037902

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	36	16,028,932 - 16,061,104 (+)	Ensembl

RefSeq Acc Id:

XM_022414846 ⟹ XP_022270554

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	36	15,906,013 - 15,961,318 (+)	NCBI
Dog10K_Boxer_Tasha	36	15,916,018 - 15,971,351 (+)	NCBI

Sequence:

show sequence

CTCTTGGGCCCAGCCAGCCGCGCACCCGGCCCTCGCCTCCATGGGCCCAGCTCAGAAACCCAAC
GTGTGCCGCCAGCTCAGTCGCCGGGCGCTGGGCTTCTTCTCGCGGGACGCAGGCGTGGTGCAGA
GGACCAACCTGGGCATCCTGAGGGCGCTGGTGTGCCAGGAAAGTACTAAGTTTAAGAATGTGTG
GACCACTCATTCTAAGTCACCTATAGCCTATGAGAGAGGAAGAATATATTTTGACAATTACCGG
TGCTGTGTCAGCAGTGTTGCATCAGAGCCAAGAAAACTTTATGAAATGCCAAAATGTTCCAAAT
CAGAAAAAATAGAGGATGCATTATTATGGGAATGCCCAGTGGGGGAAATACTTCCCAATCCATC
AGATTATAAATCTTCACTGATAGCACTGACTGCTCATAATTGGTTATTTCGCATATCAGCAACT
ACTGGAAAAGTCCTTGAGAAAATATATCTTGCTTCATATTGCAAATTCAGATACTTGAGCTGGG
ACACTCCTCAAGAAGTCATTGCAGTCAAGTCAGCTCAAAACAAAGGCTCAGTATTGGCCCGGCA
GGCAGGCATTCAACAGCCTGTTTTGCTGTACCTTGCAGTGTTCCATGTTTTACCTTTTTCACTC
ATAGGGATTCTGGAGATCAATAAGAAGATTTTCGGGAACGTTACAGATGCTACCTTGTCTCATG
GAATACTGATTGTGATGTACAGCTCAGGACTGGTCAGACTCTATAGCTTCCAAGCCATCACTGA
ACAGTTCATGCAACAGAAACTTGACTTAGGGTGTGCATGCAGATGGGGTGGGACTGCTGGAACT
GTAGGAGAGGCTCCTTTTGGCATTCCTTGTAATATTAAAATCACAGACACACCACCACTGCTCT
TTGAAGTGTCCTCTCTGGAGAATGCTTTTCAGATTGGAGGCCATCCTTGGCACTACATCATCAC
ACCTAATAAGAAGAAACAGAAAGGAGTTTTCCATATTTGTGCCCTAAAAGATAATTCCTTGGCA
AAAAATGGGATCCAAGAAATGGAATGTTGTTCTCTCGAATCTGACTGGATCTATTTTCATCCAG
ATGCTTCTGGTAGAATAATACATGTTGGCCCAAATCAGGTCAAAGTTTTAAAGCTAAATGAAGT
AGAAAATAATAGTGCCCAGCATCAGATCTCTGAAGATTTTGTCATTTTGGCCAACAGGGAGAAG
AATAAAAATGAAAATTTACCCACTGTTACAGCTTCTGGACGGGTGGTGAAAAGAACTTTTAACC
TTCTGGATGATGACCCAGAACAAGAGACTTTTAAAATTGTGGACTATGAAGATGAGCTGGACTT
GCTTTCTGTGGTAGCTGTTACTCAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGT
AATGAATATGGAACTTTACTTAAAAGCATTCCACTAGTGGAGTCATGGGATGTGACATACAGCC
ACGAAGTCTACTTTGACAGAGACTTGGTACTACACATAGAACAGAAACCCAGCAGGGTCTTCAG
CTGCTATGTTTACCAGATGAGAGAGAATGCACAAGCAGGGAGAGGAGCAGAGAGAGACAGAAAA
GCAAAGTCCTTGCTGAGTGCAGAGTCTGCCGCAAGGCTGGATCATACAAATCTGAGATCATGAC
CCAGACCAAAACCAAGACTTGGGGGCCTGACCAACTGAACCACCCAGCTGCCGCTAAGCAAAAT
TGTATGTAAAGGGTCAAAGGGGAGGGAAGTAATCACAAAAGAAGAAATACAAATGAGCAATTAA
TAAATGAGAAATGCTAC

hide sequence

RefSeq Acc Id:

XM_022414847 ⟹ XP_022270555

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	36	15,906,013 - 15,936,816 (+)	NCBI
Dog10K_Boxer_Tasha	36	15,916,018 - 15,946,858 (+)	NCBI

Sequence:

show sequence

CTCTTGGGCCCAGCCAGCCGCGCACCCGGCCCTCGCCTCCATGGGCCCAGCTCAGAAACCCAAC
GTGTGCCGCCAGCTCAGTCGCCGGGCGCTGGGCTTCTTCTCGCGGGACGCAGGCGTGGTGCAGA
GGACCAACCTGGGCATCCTGAGGGCGCTGGTGTGCCAGGAAAGTACTAAGTTTAAGAATGTGTG
GACCACTCATTCTAAGTCACCTATAGCCTATGAGAGAGGAAGAATATATTTTGACAATTACCGG
TGCTGTGTCAGCAGTGTTGCATCAGAGCCAAGAAAACTTTATGAAATGCCAAAATGTTCCAAAT
CAGAAAAAATAGAGGATGCATTATTATGGGAATGCCCAGTGGGGGAAATACTTCCCAATCCATC
AGATTATAAATCTTCACTGATAGCACTGACTGCTCATAATTGGTTATTTCGCATATCAGCAACT
ACTGGAAAAGTCCTTGAGAAAATATATCTTGCTTCATATTGCAAATTCAGATACTTGAGCTGGG
ACACTCCTCAAGAAGTCATTGCAGTCAAGTCAGCTCAAAACAAAGGCTCAGTATTGGCCCGGCA
GGCAGGCATTCAACAGCCTGTTTTGCTGTACCTTGCAGTGTTCCATGTTTTACCTTTTTCACTC
ATAGGGATTCTGGAGATCAATAAGAAGATTTTCGGGAACGTTACAGATGCTACCTTGTCTCATG
GAATACTGATTGTGATGTACAGCTCAGGACTGGTCAGACTCTATAGCTTCCAAGCCATCACTGA
ACAGTTCATGCAACAGAAACTTGACTTAGGGTGTGCATGCAGATGGGGTGGGACTGCTGGAACT
GTAGGAGAGGCTCCTTTTGGCATTCCTTGTAATATTAAAATCACAGACACACCACCACTGCTCT
TTGAAGTGTCCTCTCTGGAGAATGCTTTTCAGATTGGAGGCCATCCTTGGCACTACATCATCAC
ACCTAATAAGAAGAAACAGAAAGGAGTTTTCCATATTTGTGCCCTAAAAGATAATTCCTTGGCA
AAAAATGGGATCCAAGAAATGGAATGTTGTTCTCTCGAATCTGACTGGATCTATTTTCATCCAG
ATGCTTCTGGTAGAATAATACATGTTGGCCCAAATCAGGTCAAAGTTTTAAAGCTAAATGAAGT
AGAAAATAATAGTGCCCAGCATCAGATCTCTGAAGATTTTGTCATTTTGGCCAACAGGGAGAAG
AATAAAAATGAAAATTTACCCACTGTTACAGCTTCTGGACGGGTGGTGAAAAGAACTTTTAACC
TTCTGGATGATGACCCAGAACAAGAGAAATCTATTGAGAACAAAGCAGAAAGCTCCTGTATATA
AAACTATATTTGAGAAAGACAGACTAAAATTACCAAAAGGTAGCAAAAATAATATACAAGGAGA
AGATGGTAGCAAAGAGAGAGATACTCTGCATCAAGAGATCAGAAAACAGAGACTTTTTAGCCTG
TAAAGGAGAAGCTGAAAACTAAAATCAGTGACACCCAGGCAAGAAGTCTACTCTTTGAAGTTTG
ATCAAGGTAATATTAAGGCAAAAGTAAATAAAGAGGAACCACATATAATAAATCTCTGTAAATT
TTTATGTCATGGGTAGTAAAAGCAGAAAATATAAATAGATTAAAAAGCAGTTTGACCAAATGTG
AGTGAATGATTAATATATGGTGATTCAAAGAAACTTGCTATGCCTGCCAAAATCTTCCATCCTG
TGGTCCATCCCTGGATGGCTGGCAAGGATCTGCTTCCCCTGTGAGGCTGTTGGGAGTCCCAGGT
TTACTTCGTTAAACAGAGTTTGAGGTTAGAGTTTTCTCTCTTAAGTCTTTACCACCATTAATCA
TTTCCAGCTAACTACTCTCATCCCAGTCCTGTTCCCATGGGTTGGATTTCAGTTCCTAATTAAT
ATTCTTCTGCAAGTATAAACAGCCATTTTTGCTTTCTTTAGAGAACCAAAACATTAAAAAAAAT
GGCAAATAGAGTCATAAATAGTATGTGATAAGCTATCAGTTCTTCTTAAAATGGCTTGTGTTTC
TCTGGATAAGACCATTCTGACAAAGTGGGTAGTTTTTAGGTTTCAGAACTGAACTTCATATATT
TAGTCCTATCTGGGAACCAGTGAACATACATATCAGAGGCAGCAATTGAATACCTCTTTTGAAT
TTGGAGAAGTTCTAGTTTGCTGTCATAATAGAAAATTTTAGCAGTACTTTGGCTGAGATCTACA
TAGACTTGGTTCTGTGAGAATCTGTAGGATACTGCTTAAAGTCTTCAAATCTTGGGACTTTAGT
AGGCAGAAAGTAGAGACACATTTCTACCTATGCTCTCACCCATTCATTCTTCCTTTGTTTTTAA
AATAAGTAATAGAATAGTTAAACTACAAATAGAAATAACCCTAACTAGATAACTGGATTTTGTC
CCTCTTCTCTGCCTTATCCATCGATTC

hide sequence

RefSeq Acc Id:

XM_038447031 ⟹ XP_038302959

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	36	16,028,948 - 16,084,543 (+)	NCBI

RefSeq Acc Id:

XM_038447032 ⟹ XP_038302960

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	36	16,028,948 - 16,064,901 (+)	NCBI

RefSeq Acc Id:

XM_038447033 ⟹ XP_038302961

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	36	16,028,948 - 16,060,031 (+)	NCBI

RefSeq Acc Id:

XM_038521107 ⟹ XP_038377035

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	36	16,114,642 - 16,170,201 (+)	NCBI

RefSeq Acc Id:

XM_038521108 ⟹ XP_038377036

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	36	16,114,642 - 16,150,579 (+)	NCBI

RefSeq Acc Id:

XM_038521109 ⟹ XP_038377037

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	36	16,114,642 - 16,145,709 (+)	NCBI

RefSeq Acc Id:

XM_038584811 ⟹ XP_038440739

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	36	16,217,139 - 16,272,033 (+)	NCBI

RefSeq Acc Id:

XM_038584812 ⟹ XP_038440740

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	36	16,217,139 - 16,249,685 (+)	NCBI

RefSeq Acc Id:

XM_038584813 ⟹ XP_038440741

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	36	16,217,139 - 16,247,568 (+)	NCBI

RefSeq Acc Id:

XM_038649222 ⟹ XP_038505150

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	36	16,114,447 - 16,170,005 (+)	NCBI

RefSeq Acc Id:

XM_038649223 ⟹ XP_038505151

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	36	16,114,447 - 16,150,382 (+)	NCBI

RefSeq Acc Id:

XM_038649225 ⟹ XP_038505153

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	36	16,114,447 - 16,145,512 (+)	NCBI

RefSeq Acc Id:

XM_846572 ⟹ XP_851665

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	36	15,906,013 - 15,938,933 (+)	NCBI
Dog10K_Boxer_Tasha	36	15,916,018 - 15,951,728 (+)	NCBI

Sequence:

show sequence

CTCTTGGGCCCAGCCAGCCGCGCACCCGGCCCTCGCCTCCATGGGCCCAGCTCAGAAACCCAAC
GTGTGCCGCCAGCTCAGTCGCCGGGCGCTGGGCTTCTTCTCGCGGGACGCAGGCGTGGTGCAGA
GGACCAACCTGGGCATCCTGAGGGCGCTGGTGTGCCAGGAAAGTACTAAGTTTAAGAATGTGTG
GACCACTCATTCTAAGTCACCTATAGCCTATGAGAGAGGAAGAATATATTTTGACAATTACCGG
TGCTGTGTCAGCAGTGTTGCATCAGAGCCAAGAAAACTTTATGAAATGCCAAAATGTTCCAAAT
CAGAAAAAATAGAGGATGCATTATTATGGGAATGCCCAGTGGGGGAAATACTTCCCAATCCATC
AGATTATAAATCTTCACTGATAGCACTGACTGCTCATAATTGGTTATTTCGCATATCAGCAACT
ACTGGAAAAGTCCTTGAGAAAATATATCTTGCTTCATATTGCAAATTCAGATACTTGAGCTGGG
ACACTCCTCAAGAAGTCATTGCAGTCAAGTCAGCTCAAAACAAAGGCTCAGTATTGGCCCGGCA
GGCAGGCATTCAACAGCCTGTTTTGCTGTACCTTGCAGTGTTCCATGTTTTACCTTTTTCACTC
ATAGGGATTCTGGAGATCAATAAGAAGATTTTCGGGAACGTTACAGATGCTACCTTGTCTCATG
GAATACTGATTGTGATGTACAGCTCAGGACTGGTCAGACTCTATAGCTTCCAAGCCATCACTGA
ACAGTTCATGCAACAGAAACTTGACTTAGGGTGTGCATGCAGATGGGGTGGGACTGCTGGAACT
GTAGGAGAGGCTCCTTTTGGCATTCCTTGTAATATTAAAATCACAGACACACCACCACTGCTCT
TTGAAGTGTCCTCTCTGGAGAATGCTTTTCAGATTGGAGGCCATCCTTGGCACTACATCATCAC
ACCTAATAAGAAGAAACAGAAAGGAGTTTTCCATATTTGTGCCCTAAAAGATAATTCCTTGGCA
AAAAATGGGATCCAAGAAATGGAATGTTGTTCTCTCGAATCTGACTGGATCTATTTTCATCCAG
ATGCTTCTGGTAGAATAATACATGTTGGCCCAAATCAGGTCAAAGTTTTAAAGCTAAATGAAGT
AGAAAATAATAGTGCCCAGCATCAGATCTCTGAAGATTTTGTCATTTTGGCCAACAGGGAGAAG
AATAAAAATGAAAATTTACCCACTGTTACAGCTTCTGGACGGGTGGTGAAAAGAACTTTTAACC
TTCTGGATGATGACCCAGAACAAGAGACTTTTAAAATTGTGGACTATGAAGATGAGCTGGACTT
GCTTTCTGTGGTAGCTGTTACTCAAATAGATGCTGAAGGAAAAGCTCACCTGGATTTCCACTGT
AATGAATATGGAACTTTACTTAAAAGCATTCCACTAGTGGAGTCATGGGATGTGACATACAGCC
ACGAAGTCTACTTTGACAGAGACTTGGTACTACACATAGAACAGAAACCCAGCAGGGTCTTCAG
CTGCTATGTTTACCAGATGGTATGTGACCCTGGGGAAGAAGAAACAACGAACAGAAGTTGTGAA
AAAGAGTGAGATAATTTTAAATTTTGACAAGTAGCTTATGAGACTTTTAGCCACACACCTGAGT
GGCTATGTTCAGTCCTCCTTTTTGTTATCTGCATAGCAAGTGTTCCAGTATGTTGACTTCAGAT
GACTGTGACTTCTTTTTTAAATTCTTGCCATATACAGGGCAATAGGGACTTCAATTTATGGAAA
GATTTTTTTAGAATGACACCCCAAGAAGTCTAGCATTTTAGAGCTTTTAGCTGGGGGATGATAC
AAATATAAAGTGTTGGGGAGCACAAAAGACAAGTTAATTTCAGTTGTTGGGGGAGGGTTATTGA
TGGAGAAATATTTAACATGGTTCTTAAAGGATGGTATGGAATTTTGATAGGTAAGACTAAGCAG
GAGAGACAAAAAAGAAAGATGTAGAAGATATAGAAAGAAATCCCCTATCCTCTATACCAAACTT
TGCCTAAGGGTAAGAAAAGAAGTCTGTAATGGAATACTTTTGAGCCATAAATGTATCATCACAT
TTTTCTAAATCATATATATGTATATATATGTTTTGTATTTATATGTTGCATTAGGAATTGGCTC
TAGTTCCCAGATTATTTTTTCTTCTATGATTTTATTCTCTTGGCTTGGTATTCCAGTTGATTAT
TTATGTTTCTATCATAGATTAATATAAAATATTACAGGAAAACTTTAAGCCAGTTTCTTTTCTG
ATATGTAGCTTGTTCAGCTTTTAATACAATTAAAAATGTTGTACTCATTTCACCGTTCTGCTTA
TTTGGTGGGTTTTCCAATTCTGCTTAGGCAGTATTTTCATAACTATGCAATAAGATAAAGAAAG
GTATCCTGGATCCCACCAGTTCTGCTCCTTGTAGAAGAGTATAGATAACATCTCAATTCCCACT
AGTGTGTGTATTGACTGATTAGTTACAAAAGACTTTTGTTTCTATCTTAGTTGTGAAACAAGTA
TTTTTTCTTCTTTGTTAGGACCAATCTAAATATAATCCTGAACTCAGATAATCATTCTTCAGAT
TGTTAAATAAAAGCAACCTAAGGGAGAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_022270554	(Get FASTA)	NCBI Sequence Viewer
	XP_022270555	(Get FASTA)	NCBI Sequence Viewer
	XP_038302959	(Get FASTA)	NCBI Sequence Viewer
	XP_038302960	(Get FASTA)	NCBI Sequence Viewer
	XP_038302961	(Get FASTA)	NCBI Sequence Viewer
	XP_038377035	(Get FASTA)	NCBI Sequence Viewer
	XP_038377036	(Get FASTA)	NCBI Sequence Viewer
	XP_038377037	(Get FASTA)	NCBI Sequence Viewer
	XP_038440739	(Get FASTA)	NCBI Sequence Viewer
	XP_038440740	(Get FASTA)	NCBI Sequence Viewer
	XP_038440741	(Get FASTA)	NCBI Sequence Viewer
	XP_038445064	(Get FASTA)	NCBI Sequence Viewer
	XP_038445065	(Get FASTA)	NCBI Sequence Viewer
	XP_038445066	(Get FASTA)	NCBI Sequence Viewer
	XP_038505150	(Get FASTA)	NCBI Sequence Viewer
	XP_038505151	(Get FASTA)	NCBI Sequence Viewer
	XP_038505153	(Get FASTA)	NCBI Sequence Viewer
	XP_851665	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000018638.5
	ENSCAFP00000057610.2
	ENSCAFP00000072481.1
	ENSCAFP00030019501.1
	ENSCAFP00040042430.1
	ENSCAFP00845037823
	ENSCAFP00845037823.1
	ENSCAFP00845037870.1
	ENSCAFP00845037902
	ENSCAFP00845037902.1

RefSeq Acc Id:	XP_851665 ⟸ XM_846572
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0QUH0 (UniProtKB/TrEMBL), A0A8I3PU08 (UniProtKB/TrEMBL), A0A8P0PNS6 (UniProtKB/TrEMBL), A0A8C0MZW8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPAQKPNVCRQLSRRALGFFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSKSPIAYERG RIYFDNYRCCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGEILPNPSDYKSSLIALTAHN WLFRISATTGKVLEKIYLASYCKFRYLSWDTPQEVIAVKSAQNKGSVLARQAGIQQPVLLYLAV FHVLPFSLIGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQAITEQFMQQKLDLGCAC RWGGTAGTVGEAPFGIPCNIKITDTPPLLFEVSSLENAFQIGGHPWHYIITPNKKKQKGVFHIC ALKDNSLAKNGIQEMECCSLESDWIYFHPDASGRIIHVGPNQVKVLKLNEVENNSAQHQISEDF VILANREKNKNENLPTVTASGRVVKRTFNLLDDDPEQETFKIVDYEDELDLLSVVAVTQIDAEG KAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPSRVFSCYVYQMVCDPGEE ETTNRSCEKE hide sequence

RefSeq Acc Id:	XP_022270554 ⟸ XM_022414846
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TZ67 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPAQKPNVCRQLSRRALGFFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSKSPIAYERG RIYFDNYRCCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGEILPNPSDYKSSLIALTAHN WLFRISATTGKVLEKIYLASYCKFRYLSWDTPQEVIAVKSAQNKGSVLARQAGIQQPVLLYLAV FHVLPFSLIGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQAITEQFMQQKLDLGCAC RWGGTAGTVGEAPFGIPCNIKITDTPPLLFEVSSLENAFQIGGHPWHYIITPNKKKQKGVFHIC ALKDNSLAKNGIQEMECCSLESDWIYFHPDASGRIIHVGPNQVKVLKLNEVENNSAQHQISEDF VILANREKNKNENLPTVTASGRVVKRTFNLLDDDPEQETFKIVDYEDELDLLSVVAVTQIDAEG KAHLDFHCNEYGTLLKSIPLVESWDVTYSHEVYFDRDLVLHIEQKPSRVFSCYVYQMRENAQAG RGAERDRKAKSLLSAESAARLDHTNLRS hide sequence

RefSeq Acc Id:	XP_022270555 ⟸ XM_022414847
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3PX04 (UniProtKB/TrEMBL), A0A8P0SHI6 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGPAQKPNVCRQLSRRALGFFSRDAGVVQRTNLGILRALVCQESTKFKNVWTTHSKSPIAYERG RIYFDNYRCCVSSVASEPRKLYEMPKCSKSEKIEDALLWECPVGEILPNPSDYKSSLIALTAHN WLFRISATTGKVLEKIYLASYCKFRYLSWDTPQEVIAVKSAQNKGSVLARQAGIQQPVLLYLAV FHVLPFSLIGILEINKKIFGNVTDATLSHGILIVMYSSGLVRLYSFQAITEQFMQQKLDLGCAC RWGGTAGTVGEAPFGIPCNIKITDTPPLLFEVSSLENAFQIGGHPWHYIITPNKKKQKGVFHIC ALKDNSLAKNGIQEMECCSLESDWIYFHPDASGRIIHVGPNQVKVLKLNEVENNSAQHQISEDF VILANREKNKNENLPTVTASGRVVKRTFNLLDDDPEQEKSIENKAESSCI hide sequence

Ensembl Acc Id:

ENSCAFP00000057610 ⟸ ENSCAFT00000087772

Ensembl Acc Id:

ENSCAFP00000018638 ⟸ ENSCAFT00000020096

RefSeq Acc Id:	XP_038377035 ⟸ XM_038521107
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038377036 ⟸ XM_038521108
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038377037 ⟸ XM_038521109
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038505150 ⟸ XM_038649222
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038505151 ⟸ XM_038649223
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038505153 ⟸ XM_038649225
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038302959 ⟸ XM_038447031
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0TZ67 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038302960 ⟸ XM_038447032
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0QUH0 (UniProtKB/TrEMBL), A0A8I3PU08 (UniProtKB/TrEMBL), A0A8P0PNS6 (UniProtKB/TrEMBL), A0A8C0MZW8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038302961 ⟸ XM_038447033
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3PX04 (UniProtKB/TrEMBL), A0A8P0SHI6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038440739 ⟸ XM_038584811
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0TZ67 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038440740 ⟸ XM_038584812
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0MZW8 (UniProtKB/TrEMBL), A0A8C0QUH0 (UniProtKB/TrEMBL), A0A8I3PU08 (UniProtKB/TrEMBL), A0A8P0PNS6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038440741 ⟸ XM_038584813
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I3PX04 (UniProtKB/TrEMBL), A0A8P0SHI6 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845037902 ⟸ ENSCAFT00845048315

Ensembl Acc Id:

ENSCAFP00845037870 ⟸ ENSCAFT00845048280

Ensembl Acc Id:

ENSCAFP00845037823 ⟸ ENSCAFT00845048221

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012660	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030011950	UniProtKB/TrEMBL
	ENSCAFG00040025957	UniProtKB/TrEMBL
	ENSCAFG00845027361	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000020096.5	UniProtKB/TrEMBL
	ENSCAFT00000087772.2	UniProtKB/TrEMBL
	ENSCAFT00000108638.1	UniProtKB/TrEMBL
	ENSCAFT00030022357.1	UniProtKB/TrEMBL
	ENSCAFT00040048574.1	UniProtKB/TrEMBL
	ENSCAFT00845048221	ENTREZGENE
	ENSCAFT00845048221.1	UniProtKB/TrEMBL
	ENSCAFT00845048280.1	UniProtKB/TrEMBL
	ENSCAFT00845048315	ENTREZGENE
	ENSCAFT00845048315.1	UniProtKB/TrEMBL
InterPro	DCAF17	UniProtKB/TrEMBL
NCBI Gene	DCAF17	ENTREZGENE
PANTHER	DDB1- AND CUL4-ASSOCIATED FACTOR 17	UniProtKB/TrEMBL
	PTHR14815	UniProtKB/TrEMBL
Pfam	DCAF17	UniProtKB/TrEMBL
UniProt	A0A8C0MZW8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0QUH0	ENTREZGENE
	A0A8C0TZ67	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PU08	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PX04	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3QDL2_CANLF	UniProtKB/TrEMBL
	A0A8P0P6V0_CANLF	UniProtKB/TrEMBL
	A0A8P0PNS6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SHI6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:39793	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM