PTMA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 25 | 43,563,145 - 43,567,987 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 25 | 43,562,395 - 43,675,699 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 25 | 44,056,313 - 44,061,150 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 25 | 43,818,611 - 43,823,463 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 25 | 43,817,860 - 43,823,463 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 25 | 43,746,908 - 43,751,731 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 25 | 43,590,250 - 43,595,085 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 25 | 43,745,404 - 43,750,240 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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PTMA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 2 | 231,708,525 - 231,713,551 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 2 | 231,706,895 - 231,713,551 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 2 | 232,573,235 - 232,578,261 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 2 | 232,281,479 - 232,286,495 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 2 | 232,398,740 - 232,403,754 | NCBI | | | | | Celera | 2 | 226,349,751 - 226,354,767 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q37.1 | NCBI | | | | | HuRef | 2 | 224,415,419 - 224,421,126 (+) | NCBI | | HuRef | | | CHM1_1 | 2 | 232,579,058 - 232,584,074 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 2 | 232,193,095 - 232,198,121 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Ptma (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 1 | 86,454,442 - 86,458,434 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 1 | 86,454,448 - 86,458,434 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 1 | 86,526,557 - 86,530,712 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 1 | 86,526,726 - 86,530,712 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 1 | 88,423,311 - 88,427,273 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 1 | 88,357,907 - 88,361,869 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 1 | 89,496,434 - 89,500,314 (+) | NCBI | | Celera | | | Cytogenetic Map | 1 | C5 | NCBI | | | | | cM Map | 1 | 43.96 | NCBI | | | | |
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Ptma (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 9 | 94,624,194 - 94,628,276 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 9 | 87,176,251 - 87,180,333 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 9 | 87,176,230 - 87,180,333 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 9 | 95,593,165 - 95,597,249 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 9 | 100,722,287 - 100,726,371 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 9 | 99,104,565 - 99,108,647 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 9 | 93,545,396 - 93,549,436 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 9 | 93,545,396 - 93,549,436 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 9 | 93,273,333 - 93,277,373 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 9 | 85,291,203 - 85,295,242 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 9 | 85,474,621 - 85,478,661 (+) | NCBI | | | | | Celera | 9 | 84,591,345 - 84,595,385 (+) | NCBI | | Celera | | | Cytogenetic Map | 9 | q35 | NCBI | | | | |
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Ptma (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 | NW_004955453 | 4,036,503 - 4,037,788 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PTMA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 13 | 134,329,362 - 134,335,272 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 2B | 134,344,327 - 134,350,223 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 2B | 118,959,382 - 118,964,364 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 2B | 237,746,118 - 237,750,806 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | |
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Ptma (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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PTMA (Sus scrofa - pig) |
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PTMA (Chlorocebus sabaeus - green monkey) |
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Ptma (Heterocephalus glaber - naked mole-rat) |
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