SULT1A1 (sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1) - Rat Genome Database

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Gene: SULT1A1 (sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1) Canis lupus familiaris
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Symbol: SULT1A1
Name: sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
RGD ID: 12387252
Description: ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); aryl sulfotransferase activity (ortholog); flavonol 3-sulfotransferase activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); 4-nitrophenol metabolic process (ortholog); catecholamine metabolic process (ortholog); PARTICIPATES IN lamivudine pharmacokinetics pathway; paracetamol pharmacokinetics pathway; sulfite oxidase deficiency pathway; ASSOCIATED WITH benign neoplasm (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog)
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: aryl sulfotransferase; cSULT1A1; P-PST; phenol sulfotransferase; phenol-sulfating phenol sulfotransferase; PST; ST1A1; sulfotransferase 1A1
RGD Orthologs
Human
Rat
Bonobo
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,176,156 - 18,179,492 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl618,176,355 - 18,179,489 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,755,231 - 19,758,321 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,312,221 - 18,315,557 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl618,312,420 - 18,315,554 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1618,111,461 - 18,114,551 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0618,026,685 - 18,029,775 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,342,761 - 18,345,851 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,IEA)
cytosol  (ISS)

References
Additional References at PubMed
PMID:9745682   PMID:12054462   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
SULT1A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1618,176,156 - 18,179,492 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl618,176,355 - 18,179,489 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha619,755,231 - 19,758,321 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0618,312,221 - 18,315,557 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl618,312,420 - 18,315,554 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1618,111,461 - 18,114,551 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0618,026,685 - 18,029,775 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0618,342,761 - 18,345,851 (+)NCBIUU_Cfam_GSD_1.0
SULT1A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381628,605,258 - 28,623,375 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1628,605,196 - 28,610,044 (-)EnsemblGRCh38hg38GRCh38
GRCh371628,616,579 - 28,634,696 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361628,524,414 - 28,542,367 (-)NCBINCBI36Build 36hg18NCBI36
Build 341628,524,418 - 28,542,367NCBI
Celera1627,573,787 - 27,591,759 (+)NCBICelera
Cytogenetic Map16p11.2NCBI
HuRef1626,642,169 - 26,659,808 (-)NCBIHuRef
CHM1_11629,629,153 - 29,647,182 (-)NCBICHM1_1
T2T-CHM13v2.01628,772,308 - 28,790,437 (+)NCBIT2T-CHM13v2.0
Sult1a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81190,702,592 - 190,706,112 (-)NCBIGRCr8
mRatBN7.21181,272,022 - 181,276,750 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1181,272,023 - 181,275,562 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1189,623,229 - 189,626,764 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01196,809,299 - 196,812,834 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01189,476,705 - 189,480,237 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01198,100,586 - 198,104,106 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1198,100,586 - 198,104,109 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01205,079,585 - 205,083,105 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41185,829,205 - 185,832,725 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11185,979,085 - 185,982,606 (-)NCBI
Celera1178,929,499 - 178,933,019 (-)NCBICelera
Cytogenetic Map1q36NCBI
LOC100969764
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21831,222,978 - 31,241,380 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11634,852,633 - 34,871,037 (+)NCBINHGRI_mPanPan1
LOC101697399
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462478213,079,596 - 13,094,149 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SULT1A1
41 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence


Ensembl Acc Id: ENSCAFT00000027121   ⟹   ENSCAFP00000025221
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl618,176,399 - 18,179,489 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000046198   ⟹   ENSCAFP00000036703
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl618,176,355 - 18,179,446 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845003868   ⟹   ENSCAFP00845003082
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl618,312,420 - 18,315,511 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845003885   ⟹   ENSCAFP00845003096
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl618,312,464 - 18,315,554 (+)Ensembl
RefSeq Acc Id: NM_001003223   ⟹   NP_001003223
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1618,176,399 - 18,179,489 (+)NCBI
Dog10K_Boxer_Tasha619,755,231 - 19,758,321 (+)NCBI
ROS_Cfam_1.0618,312,464 - 18,315,554 (+)NCBI
UMICH_Zoey_3.1618,111,461 - 18,114,551 (+)NCBI
UNSW_CanFamBas_1.0618,026,685 - 18,029,775 (+)NCBI
UU_Cfam_GSD_1.0618,342,761 - 18,345,851 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038667556   ⟹   XP_038523484
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0618,312,221 - 18,315,557 (+)NCBI
RefSeq Acc Id: NP_001003223   ⟸   NM_001003223
- UniProtKB: Q29476 (UniProtKB/Swiss-Prot),   A0A8C0R2T7 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000025221   ⟸   ENSCAFT00000027121
Ensembl Acc Id: ENSCAFP00000036703   ⟸   ENSCAFT00000046198
RefSeq Acc Id: XP_038523484   ⟸   XM_038667556
- Peptide Label: isoform X1
- UniProtKB: Q29476 (UniProtKB/Swiss-Prot),   A0A8C0R2T7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845003082   ⟸   ENSCAFT00845003868
Ensembl Acc Id: ENSCAFP00845003096   ⟸   ENSCAFT00845003885
Protein Domains
Sulfotransferase

Promoters
RGD ID:13683631
Promoter ID:EPDNEW_C1701
Type:multiple initiation site
Name:SULT1A1_1
Description:Sulfotransferase 1A1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1618,176,370 - 18,176,430EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000017122 Ensembl, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSCAFG00030000768 UniProtKB/Swiss-Prot
  ENSCAFG00040000352 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ENSCAFG00805030218 UniProtKB/Swiss-Prot
  ENSCAFG00845002193 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000027121.3 UniProtKB/Swiss-Prot
  ENSCAFT00000046198.3 UniProtKB/TrEMBL
  ENSCAFT00030001324.1 UniProtKB/Swiss-Prot
  ENSCAFT00040000589.1 UniProtKB/TrEMBL
  ENSCAFT00040000610.1 UniProtKB/Swiss-Prot
  ENSCAFT00805054942 UniProtKB/Swiss-Prot
  ENSCAFT00845003868.1 UniProtKB/TrEMBL
  ENSCAFT00845003885 ENTREZGENE
  ENSCAFT00845003885.1 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sulfotransferase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report cfa:403892 UniProtKB/Swiss-Prot
NCBI Gene SULT1A1 ENTREZGENE
PANTHER SULFOTRANSFERASE 1A2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SULFOTRANSFERASE SULT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Sulfotransfer_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8C0PKL3_CANLF UniProtKB/TrEMBL
  A0A8C0R2T7 ENTREZGENE
  A0A8I3MI97_CANLF UniProtKB/TrEMBL
  Q29476 ENTREZGENE, UniProtKB/Swiss-Prot