RNF220 (ring finger protein 220) - Rat Genome Database

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Gene: RNF220 (ring finger protein 220) Canis lupus familiaris
Analyze
Symbol: RNF220
Name: ring finger protein 220
RGD ID: 12381612
Description: ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN dorsal/ventral neural tube patterning (ortholog); noradrenergic neuron development (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); developmental and epileptic encephalopathy (ortholog); early infantile epileptic encephalopathy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear lamina (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: E3 ubiquitin-protein ligase RNF220
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11515,664,025 - 15,898,564 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1515,664,876 - 15,891,748 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1515,784,128 - 16,018,778 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01515,815,744 - 15,835,110 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11515,616,773 - 15,851,320 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01515,683,868 - 15,918,919 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01515,757,561 - 15,992,375 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RNF220
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11515,664,025 - 15,898,564 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1515,664,876 - 15,891,748 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1515,784,128 - 16,018,778 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01515,815,744 - 15,835,110 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11515,616,773 - 15,851,320 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01515,683,868 - 15,918,919 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01515,757,561 - 15,992,375 (-)NCBIUU_Cfam_GSD_1.0
RNF220
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38144,404,783 - 44,651,724 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl144,405,194 - 44,651,723 (+)EnsemblGRCh38hg38GRCh38
GRCh37144,870,832 - 45,117,396 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36144,643,547 - 44,889,983 (+)NCBINCBI36Build 36hg18NCBI36
Celera143,154,154 - 43,400,285 (+)NCBICelera
Cytogenetic Map1p34.1NCBI
HuRef142,984,500 - 43,231,589 (+)NCBIHuRef
CHM1_1144,986,448 - 45,233,292 (+)NCBICHM1_1
T2T-CHM13v2.0144,276,080 - 44,522,650 (+)NCBIT2T-CHM13v2.0
Rnf220
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394117,128,660 - 117,354,249 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4117,128,660 - 117,354,249 (-)EnsemblGRCm39 Ensembl
GRCm384117,271,463 - 117,497,052 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4117,271,463 - 117,497,052 (-)EnsemblGRCm38mm10GRCm38
MGSCv374116,944,069 - 117,169,520 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364116,769,396 - 116,994,847 (-)NCBIMGSCv36mm8
Celera4116,001,586 - 116,228,429 (-)NCBICelera
Cytogenetic Map4D1NCBI
cM Map453.44NCBI
Rnf220
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85135,975,739 - 136,198,017 (-)NCBIGRCr8
mRatBN7.25130,739,173 - 130,961,386 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5130,739,183 - 130,961,418 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.05136,129,457 - 136,351,752 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5136,129,425 - 136,166,786 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,922,945 - 140,141,394 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45137,577,219 - 137,779,245 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera5129,260,095 - 129,480,329 (-)NCBICelera
Cytogenetic Map5q36NCBI
Rnf220
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546413,580,742 - 13,801,837 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546413,579,828 - 13,795,266 (-)NCBIChiLan1.0ChiLan1.0
RNF220
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21182,157,293 - 182,403,726 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11181,298,690 - 181,545,079 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0143,707,764 - 43,954,197 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1145,076,804 - 45,320,671 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl145,083,499 - 45,319,721 (+)Ensemblpanpan1.1panPan2
Rnf220
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505859,847,401 - 60,069,555 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647425,678,667 - 25,897,665 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647425,678,672 - 25,894,337 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RNF220
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6166,666,138 - 166,910,646 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16166,666,140 - 166,910,728 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.26154,217,053 - 154,462,478 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RNF220
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12088,134,359 - 88,387,402 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603328,542,690 - 28,789,415 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rnf220
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624906313,660 - 544,123 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624906287,817 - 544,123 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RNF220
2212 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014119355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022428032 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022428033 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022428034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038452163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038495913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038558285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622169 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622175 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038622176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687916 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038687917 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000161 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000015 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000036543   ⟹   ENSCAFP00000031935
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1515,664,876 - 15,891,748 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000086964   ⟹   ENSCAFP00000063517
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1515,887,381 - 15,891,631 (-)Ensembl
RefSeq Acc Id: XM_014119355   ⟹   XP_013974830
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11515,664,025 - 15,898,564 (-)NCBI
Dog10K_Boxer_Tasha1515,784,128 - 16,018,778 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014119356   ⟹   XP_013974831
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11515,664,025 - 15,897,641 (-)NCBI
Dog10K_Boxer_Tasha1515,784,128 - 16,017,861 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014119357   ⟹   XP_013974832
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11515,664,025 - 15,896,548 (-)NCBI
Dog10K_Boxer_Tasha1515,784,128 - 16,016,756 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022428032   ⟹   XP_022283740
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11515,664,025 - 15,898,562 (-)NCBI
Dog10K_Boxer_Tasha1515,784,128 - 16,018,652 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022428033   ⟹   XP_022283741
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11515,664,025 - 15,893,488 (-)NCBI
Dog10K_Boxer_Tasha1515,784,128 - 16,013,890 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038452162   ⟹   XP_038308090
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1515,784,128 - 16,013,888 (-)NCBI
RefSeq Acc Id: XM_038452163   ⟹   XP_038308091
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1515,784,128 - 15,803,477 (-)NCBI
RefSeq Acc Id: XM_038495907   ⟹   XP_038351835
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,846,435 (-)NCBI
RefSeq Acc Id: XM_038495908   ⟹   XP_038351836
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,850,403 (-)NCBI
RefSeq Acc Id: XM_038495909   ⟹   XP_038351837
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,851,194 (-)NCBI
RefSeq Acc Id: XM_038495910   ⟹   XP_038351838
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,849,298 (-)NCBI
RefSeq Acc Id: XM_038495911   ⟹   XP_038351839
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,851,320 (-)NCBI
RefSeq Acc Id: XM_038495912   ⟹   XP_038351840
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,846,433 (-)NCBI
RefSeq Acc Id: XM_038495913   ⟹   XP_038351841
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11515,616,773 - 15,636,102 (-)NCBI
RefSeq Acc Id: XM_038558279   ⟹   XP_038414207
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,987,487 (-)NCBI
RefSeq Acc Id: XM_038558280   ⟹   XP_038414208
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,991,457 (-)NCBI
RefSeq Acc Id: XM_038558281   ⟹   XP_038414209
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,992,249 (-)NCBI
RefSeq Acc Id: XM_038558282   ⟹   XP_038414210
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,990,352 (-)NCBI
RefSeq Acc Id: XM_038558283   ⟹   XP_038414211
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,992,375 (-)NCBI
RefSeq Acc Id: XM_038558284   ⟹   XP_038414212
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,987,485 (-)NCBI
RefSeq Acc Id: XM_038558285   ⟹   XP_038414213
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01515,757,561 - 15,776,930 (-)NCBI
RefSeq Acc Id: XM_038622169   ⟹   XP_038478097
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,914,034 (-)NCBI
RefSeq Acc Id: XM_038622170   ⟹   XP_038478098
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,918,002 (-)NCBI
RefSeq Acc Id: XM_038622171   ⟹   XP_038478099
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,918,793 (-)NCBI
RefSeq Acc Id: XM_038622173   ⟹   XP_038478101
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,916,897 (-)NCBI
RefSeq Acc Id: XM_038622174   ⟹   XP_038478102
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,918,919 (-)NCBI
RefSeq Acc Id: XM_038622175   ⟹   XP_038478103
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,914,032 (-)NCBI
RefSeq Acc Id: XM_038622176   ⟹   XP_038478104
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01515,683,868 - 15,703,222 (-)NCBI
RefSeq Acc Id: XM_038687915   ⟹   XP_038543843
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01515,815,744 - 15,835,110 (-)NCBI
RefSeq Acc Id: XM_038687916   ⟹   XP_038543844
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01515,815,744 - 15,835,110 (-)NCBI
RefSeq Acc Id: XM_038687917   ⟹   XP_038543845
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01515,815,744 - 15,835,079 (-)NCBI
Protein Sequences
Protein RefSeqs XP_013974830 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974831 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974832 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283740 (Get FASTA)   NCBI Sequence Viewer  
  XP_022283741 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308090 (Get FASTA)   NCBI Sequence Viewer  
  XP_038308091 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351835 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351836 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351837 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351838 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351839 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351840 (Get FASTA)   NCBI Sequence Viewer  
  XP_038351841 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414207 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414208 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414209 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414210 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414211 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414212 (Get FASTA)   NCBI Sequence Viewer  
  XP_038414213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478097 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478098 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478099 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478101 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478102 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478103 (Get FASTA)   NCBI Sequence Viewer  
  XP_038478104 (Get FASTA)   NCBI Sequence Viewer  
  XP_038543843 (Get FASTA)   NCBI Sequence Viewer  
  XP_038543844 (Get FASTA)   NCBI Sequence Viewer  
  XP_038543845 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000031935.2
  ENSCAFP00000063517.2
  ENSCAFP00000073922.1
  ENSCAFP00030022951.1
  ENSCAFP00040008034.1
  ENSCAFP00845037506
  ENSCAFP00845037506.1
  ENSCAFP00845037566.1
  ENSCAFP00845037625
  ENSCAFP00845037625.1
RefSeq Acc Id: XP_013974830   ⟸   XM_014119355
- Peptide Label: isoform X10
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974831   ⟸   XM_014119356
- Peptide Label: isoform X10
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013974832   ⟸   XM_014119357
- Peptide Label: isoform X10
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283740   ⟸   XM_022428032
- Peptide Label: isoform X10
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022283741   ⟸   XM_022428033
- Peptide Label: isoform X10
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000063517   ⟸   ENSCAFT00000086964
RefSeq Acc Id: ENSCAFP00000031935   ⟸   ENSCAFT00000036543
RefSeq Acc Id: XP_038351839   ⟸   XM_038495911
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351837   ⟸   XM_038495909
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351836   ⟸   XM_038495908
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351838   ⟸   XM_038495910
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351835   ⟸   XM_038495907
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038351840   ⟸   XM_038495912
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038351841   ⟸   XM_038495913
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038478102   ⟸   XM_038622174
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038478099   ⟸   XM_038622171
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038478098   ⟸   XM_038622170
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038478101   ⟸   XM_038622173
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038478097   ⟸   XM_038622169
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038478103   ⟸   XM_038622175
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038478104   ⟸   XM_038622176
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038543844   ⟸   XM_038687916
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KUY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038543843   ⟸   XM_038687915
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KUY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038543845   ⟸   XM_038687917
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KUY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308090   ⟸   XM_038452162
- Peptide Label: isoform X11
- UniProtKB: A0A8C0Q8S9 (UniProtKB/TrEMBL),   A0A8P0NM58 (UniProtKB/TrEMBL),   A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038308091   ⟸   XM_038452163
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KUY3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414211   ⟸   XM_038558283
- Peptide Label: isoform X8
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414209   ⟸   XM_038558281
- Peptide Label: isoform X8
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414208   ⟸   XM_038558280
- Peptide Label: isoform X8
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414210   ⟸   XM_038558282
- Peptide Label: isoform X8
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414207   ⟸   XM_038558279
- Peptide Label: isoform X8
- UniProtKB: A0A8C0R2M9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414212   ⟸   XM_038558284
- Peptide Label: isoform X9
- UniProtKB: A0A8C0Q8S9 (UniProtKB/TrEMBL),   A0A8C0R2M9 (UniProtKB/TrEMBL),   A0A8P0NM58 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038414213   ⟸   XM_038558285
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KUY3 (UniProtKB/TrEMBL)
Protein Domains
RING-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000004792 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030014189 UniProtKB/TrEMBL
  ENSCAFG00040004923 UniProtKB/TrEMBL
  ENSCAFG00845027123 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000036543.4 UniProtKB/TrEMBL
  ENSCAFT00000086964.2 UniProtKB/TrEMBL
  ENSCAFT00000094729.1 UniProtKB/TrEMBL
  ENSCAFT00030026288.1 UniProtKB/TrEMBL
  ENSCAFT00040009270.1 UniProtKB/TrEMBL
  ENSCAFT00845047797 ENTREZGENE
  ENSCAFT00845047797.1 UniProtKB/TrEMBL
  ENSCAFT00845047888.1 UniProtKB/TrEMBL
  ENSCAFT00845047959 ENTREZGENE
  ENSCAFT00845047959.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro RNF220_mid UniProtKB/TrEMBL
  RNF220_RING UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene RNF220 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF220 UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam RNF220 UniProtKB/TrEMBL
  zf-C3HC4_2 UniProtKB/TrEMBL
PROSITE ZF_RING_2 UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
UniProt A0A8C0KUY3 ENTREZGENE
  A0A8C0Q8S9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0R2M9 ENTREZGENE
  A0A8I3PRY4_CANLF UniProtKB/TrEMBL
  A0A8I3PTI3_CANLF UniProtKB/TrEMBL
  A0A8I3QD03_CANLF UniProtKB/TrEMBL
  A0A8P0NM58 ENTREZGENE
  A0A8P0TF13_CANLF UniProtKB/TrEMBL
  A0A8P0TSX6_CANLF UniProtKB/TrEMBL
UniProt Secondary A0A8P0NM58 UniProtKB/TrEMBL
VGNC ID VGNC:108233 ENTREZGENE