TTLL12 (tubulin tyrosine ligase like 12)

Gene: TTLL12 (tubulin tyrosine ligase like 12) Canis lupus familiaris

Analyze

Symbol:

TTLL12

Name:

tubulin tyrosine ligase like 12

RGD ID:

12379637

Description:

ENCODES a protein that exhibits histone H4K20 trimethyltransferase activity (ortholog); tubulin-tyrosine ligase activity (ortholog); INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (inferred); protein modification process (inferred); regulation of mitotic cell cycle (inferred); ASSOCIATED WITH Developmental Delay with Variable Intellectual Impairment and Behavioral Abnormalities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tubulin tyrosine ligase-like family, member 12; tubulin--tyrosine ligase-like protein 12

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	22,367,590 - 22,385,167 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	22,304,290 - 22,321,864 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	23,112,096 - 23,129,643 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	23,111,562 - 23,129,625 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	22,831,432 - 22,848,971 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	23,150,355 - 23,167,934 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	23,326,241 - 23,343,803 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Developmental Delay with Variable Intellectual Impairment and Behavioral Abnormalities (ISO)

genetic disease (ISO)

intellectual disability (ISO)

Phelan-McDermid syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of type I interferon-mediated signaling pathway (IEA)

protein modification process (IEA)

regulation of mitotic cell cycle (IEA)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

plasma membrane (IEA)

Molecular Function

H4K20me3 modified histone binding (IEA)

histone H4K20 trimethyltransferase activity (ISO)

protein binding (ISO)

tubulin binding (IEA)

tubulin-tyrosine ligase activity (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TTLL12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	10	22,367,590 - 22,385,167 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	10	22,304,290 - 22,321,864 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	10	23,112,096 - 23,129,643 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	10	23,111,562 - 23,129,625 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	10	22,831,432 - 22,848,971 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	10	23,150,355 - 23,167,934 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	10	23,326,241 - 23,343,803 (+)	NCBI		UU_Cfam_GSD_1.0

TTLL12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	22	43,166,622 - 43,187,134 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	22	43,166,622 - 43,187,134 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	22	43,562,628 - 43,583,140 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	22	41,892,572 - 41,913,051 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	22	27,473,015 - 27,493,525 (-)	NCBI		Celera
Cytogenetic Map	22	q13.2	NCBI
HuRef	22	26,520,840 - 26,541,320 (-)	NCBI		HuRef
CHM1_1	22	43,521,891 - 43,542,376 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	22	43,647,474 - 43,667,938 (-)	NCBI		T2T-CHM13v2.0

Ttll12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	15	83,459,295 - 83,479,358 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	15	83,459,291 - 83,479,358 (-)	Ensembl		GRCm39 Ensembl
GRCm38	15	83,575,094 - 83,595,157 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	15	83,575,090 - 83,595,157 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	15	83,405,524 - 83,425,587 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	15	83,403,576 - 83,422,878 (-)	NCBI		MGSCv36	mm8
Celera	15	85,701,912 - 85,721,975 (-)	NCBI		Celera
Cytogenetic Map	15	E1	NCBI
cM Map	15	39.4	NCBI

Ttll12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	116,612,609 - 116,631,244 (-)	NCBI		GRCr8
mRatBN7.2	7	114,731,890 - 114,751,237 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	114,731,892 - 114,751,356 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	116,479,632 - 116,498,238 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	118,705,346 - 118,723,851 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	118,674,816 - 118,693,321 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	124,472,758 - 124,491,004 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	124,472,758 - 124,491,004 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	124,461,238 - 124,479,484 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	121,601,492 - 121,620,937 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	121,634,544 - 121,655,280 (-)	NCBI
Celera	7	111,043,936 - 111,062,464 (-)	NCBI		Celera
Cytogenetic Map	7	q34	NCBI

Ttll12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	28,316,936 - 28,333,508 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	28,316,936 - 28,333,423 (-)	NCBI	ChiLan1.0	ChiLan1.0

TTLL12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	23	52,977,557 - 53,009,632 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	22	55,669,517 - 55,702,553 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	22	24,038,128 - 24,070,135 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	22	42,248,276 - 42,270,232 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	22	42,249,660 - 42,271,318 (-)	Ensembl	panpan1.1		panPan2

Ttll12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	5,966,837 - 5,983,407 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936718	996,000 - 1,010,342 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936718	996,758 - 1,013,372 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TTLL12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	5,701,583 - 5,720,724 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	5,687,895 - 5,719,003 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	3,124,019 - 3,141,730 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TTLL12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	19	25,693,844 - 25,714,386 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	19	25,692,610 - 25,714,342 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666045	99,724,252 - 99,744,802 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ttll12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624752	5,796,958 - 5,813,075 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624752	5,796,935 - 5,813,078 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TTLL12
272 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	5		17	1	6	1	6		12		10	6
Low		5	5	5		5		6		8
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038488381	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038550294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038614274	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038679614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_531703	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000099	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000002	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000358	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000001412 ⟹ ENSCAFP00000001298

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	22,367,367 - 22,384,509 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000075050 ⟹ ENSCAFP00000065882

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000083964 ⟹ ENSCAFP00000045807

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000089077 ⟹ ENSCAFP00000060803

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000093814 ⟹ ENSCAFP00000044792

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	10	22,367,367 - 22,386,617 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025083 ⟹ ENSCAFP00845019735

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	23,111,562 - 23,129,625 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845025135 ⟹ ENSCAFP00845019767

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	10	23,111,562 - 23,129,625 (+)	Ensembl

RefSeq Acc Id:

XM_038488381 ⟹ XP_038344309

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	10	22,831,432 - 22,848,971 (+)	NCBI

RefSeq Acc Id:

XM_038550294 ⟹ XP_038406222

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	10	23,326,241 - 23,343,803 (+)	NCBI

RefSeq Acc Id:

XM_038614274 ⟹ XP_038470202

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	10	23,150,355 - 23,167,934 (+)	NCBI

RefSeq Acc Id:

XM_038679614 ⟹ XP_038535542

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	10	23,112,096 - 23,129,643 (+)	NCBI

RefSeq Acc Id:

XM_531703 ⟹ XP_531703

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	22,367,590 - 22,385,167 (+)	NCBI
Dog10K_Boxer_Tasha	10	22,304,290 - 22,321,864 (+)	NCBI

Sequence:

show sequence

GACTCGGCGCTGGCGCTCGTGCGGGCTCCATGGACGCCGACGCGGAGCCCGGCGCCCCGGGCCT
GACTGCGGAGGACGGCGCGCGGGCCCCGGCCGAGTTTGCGGCGCTGCACGGCCCGGCGCTGCGA
GCGTCCGGGGTCCCCGAGCGCTACTGGGGCCGCCTCCTGCACAAGCTGGAGCACGAGGTTTTCG
ATGCTGGGGAGATGTTCGGGATAATGCAAGTGGAGGAAGTGGAGGAGGAGAGTGAGGGTGAGGA
GGCCCGGGAGGTGCGGAAGAAGAAGCCCAACCCCGGCGGTGGTGGTGGCGGCGAACTCTGCTAC
AAGGTCATTGTGACCAGCGAGAACGGGCTACAGGCGGCTGACCCCAACAGCATCTTCCTCATCG
ACCACGCCTGGACGTGCCGCGTGGAGCATGCCCGCCAGCAGCTACACCAGGTGCCCGGGCTGCT
GCACCGCATGGCCAACCTGATGGGCGTAGAATTCCACGGCGAGCTGCCCAGCGCTGAGGCTGTG
GACCTGGTCCTGGAGGAGATGTGGCGGTTTAACCAGACCTACCAGCTGGCCCACGGGACGGCCG
AGGAGAAGGTGCCAGTGTGGTACATCATGGACGAGTTCGGCTCGCGCATCCAGCACTCAGACAC
GCCCAGCTTTGCCACGGCGCCCTTCTTCTACATGCCCCAGCAAGTGGCCTACACGCTGCTGTGG
CCGCTGCGGGACCTGGACACGGGCGAGGAGGTGACCCGGGACTTTGCCTACGGAGAGGCAGACC
CTCTGATCCGGAAGTGCATGCTGCTGCCCTGGGTCCCTGCCGACATGCTGGACTTCAGCTCCTC
CACGCCCGAGCCACCCGATGAGCACTACCAGGCCATTTTGGAGGAAAACAAGGAGAAGCTACCA
CTTGCCATCAGTCCAGTGGCGTATCCCCGTGACCACGTCTTCAAGGTCTACACAGACATCCAGC
AGGTGCTCAGCCACCTCAGCCACCCACGCTTCACCTTCACCCAGAGTGAGGCCGACGCCGACAT
TCTCTACAACTTCTCCCACTTCAAGGATTACAGGAGGCTCAGCCAGGAGAGGCCCAACGTGCTG
CTGAACCAGTTCCCCTGCGAGAACCTGCTGACGGTGAAGGACTGCCTGGCCTCCATCGCGCGCC
GGGCAGGGGGCCCCGAGGGCCCGGCCTGGCTGCCCCGCACCTTCAACCTACGCACCGAGTTACC
CCAGTTTGTTAGCTACTTCCAACAGCGGGAGAGGCGGGGCCAGGATAACCACTGGATCTGCAAG
CCCTGGAACCTGGCCCGCAGCCTGGACACCCACATCACCAGGAGCCTCCACAGCATCATCCGGC
ACCGCGAAAGCACCCCCAAGGTCGTGTCCAAATACATTGAAAGTCCCGTCTTGTTCCTTCGAGA
AGACGTGGGGCCGGTCAAGTTCGATGTCCGCTATGTCGTGCTTCTGCGGTCGGTGAAGCCCCTG
ACTCTGTTCGTGTATGACGTGTTCTGGCTGCGGTTCTCCAACCGGCCCTTCGCACTTGATGACC
TGGACGACTATGAGAAACATTTCACTGTCATGAACTATGACCCAGAAGTGGTGCTGAAGCAGGT
ACACTATGATGAGTTCATCCCTGAGTTTGAGAAGCAGTACCCAGAATTCCCCTGGAAGAGCGTC
CAGGGTGAGATCTTCCAGGCCTTCACGGAGCTGTTCCAAGTGGCCTGTGCCAAGCCACCTCCCC
TGGGCCTCTGCGACTATCCCTCATCCCGCGCTGTGTACGCTGTCGACCTCATGCTCAAGTGGGA
CAACCGGCCAGATGGGAAGCGAGTGATGCAGCCCCAGATCCTGGAAGTAAACTTCAACCCGGAC
TGTGAACGGGCCTGCAGGTACCACCCAAGCTTCTTCAATGACGTCTTCAGCACCCTGTACCTGG
ATGAGCCCGGCCCCTGCCACGTCACCCGCCTAGTCTAGGTGCTTGTGGCTCTGCTGGGGCCGCC
CGGCCGTTCCAGCCTCAGCTCCCGGAGCTGCTTCTGCAGAGCCCCCTCCTCTCCTCCCTCAGGC
GCAGCCTCACCCCGGAGCTGTCATCCCGGCTCCACCTCTGGGAGCTCAGGGTCCTCAGGGTCCT
CCCCTCCCAAGGTCAGCAGCAGGGCCAGTCACCGTGTCCCCGGGGCTGAGCGCCAGGCCCTGCC
CCTCACCATCTTCTGTGCTCAGTGAAGGGCTTTTCCAGAGAGTCTGATTCCTAGGCTGCTGCAC
GTTCTGGGGTGTTGGTGGGAGATGGGCTCTGGGGAGCACAACAAGTTTCCCCAGCAACACCCCA
TACATGAACAGGGACCAGACAGGCTGCTTCTCCAGAGTGCTGCTCGTGACTCCCATGGGGCAGG
GGGTTGGGGTCCCACCCTGCACCCCCAGAACATCTGGGAGCCCCCTCTCCCAGACCCAGCCACC
TTGTTCCCAATCTCGACCAAAACCTTTACCAGCAAGCTTCCCGTGGAGTTTCCAGGTCAGGAAG
CCTGTGGCCTTTGGCTGCTGTCGCCTTAGCATTCGGCAAAGCAGGCCACCCTCCTGCCTCGGTG
GCCCCAGCAGCCCCGGCCACTCACCGGGCACGGAAGTATCCCCACACACACCTGATGTCCCCTG
GGGCCTTGGTGATGCGTGTGGGGGGCCAAGCGCCAGGCAGCGCACAGCTGAGGAAGAGACGATT
CCAGGGAAAACTTGACGTTACAGGCAGAGGCCACCTTCCACGAGAGTCTAGAGTCAAATGTTGG
GTTCTTGTTAATTTTTCATTTATGGAAGGAAAATATAAAAATTATTTCTGTAACTTTGTTTCTG
AAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038344309	(Get FASTA)	NCBI Sequence Viewer
	XP_038406222	(Get FASTA)	NCBI Sequence Viewer
	XP_038470202	(Get FASTA)	NCBI Sequence Viewer
	XP_038535542	(Get FASTA)	NCBI Sequence Viewer
	XP_531703	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000001298.5
	ENSCAFP00000044792.2
	ENSCAFP00030006971.1
	ENSCAFP00030007070.1
	ENSCAFP00030007133.1
	ENSCAFP00845019735.1
	ENSCAFP00845019767.1

RefSeq Acc Id:

XP_531703 ⟸ XM_531703

- UniProtKB:

A0A8C0M6L6 (UniProtKB/TrEMBL), A0A8P0N456 (UniProtKB/TrEMBL), A0A8C0MBU5 (UniProtKB/TrEMBL), A0A8P0SY41 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDADAEPGAPGLTAEDGARAPAEFAALHGPALRASGVPERYWGRLLHKLEHEVFDAGEMFGIMQ
VEEVEEESEGEEAREVRKKKPNPGGGGGGELCYKVIVTSENGLQAADPNSIFLIDHAWTCRVEH
ARQQLHQVPGLLHRMANLMGVEFHGELPSAEAVDLVLEEMWRFNQTYQLAHGTAEEKVPVWYIM
DEFGSRIQHSDTPSFATAPFFYMPQQVAYTLLWPLRDLDTGEEVTRDFAYGEADPLIRKCMLLP
WVPADMLDFSSSTPEPPDEHYQAILEENKEKLPLAISPVAYPRDHVFKVYTDIQQVLSHLSHPR
FTFTQSEADADILYNFSHFKDYRRLSQERPNVLLNQFPCENLLTVKDCLASIARRAGGPEGPAW
LPRTFNLRTELPQFVSYFQQRERRGQDNHWICKPWNLARSLDTHITRSLHSIIRHRESTPKVVS
KYIESPVLFLREDVGPVKFDVRYVVLLRSVKPLTLFVYDVFWLRFSNRPFALDDLDDYEKHFTV
MNYDPEVVLKQVHYDEFIPEFEKQYPEFPWKSVQGEIFQAFTELFQVACAKPPPLGLCDYPSSR
AVYAVDLMLKWDNRPDGKRVMQPQILEVNFNPDCERACRYHPSFFNDVFSTLYLDEPGPCHVTR
LV

hide sequence

RefSeq Acc Id:

ENSCAFP00000044792 ⟸ ENSCAFT00000093814

RefSeq Acc Id:

ENSCAFP00000001298 ⟸ ENSCAFT00000001412

RefSeq Acc Id:

ENSCAFP00000045807 ⟸ ENSCAFT00000083964

RefSeq Acc Id:

ENSCAFP00000060803 ⟸ ENSCAFT00000089077

RefSeq Acc Id:

ENSCAFP00000065882 ⟸ ENSCAFT00000075050

RefSeq Acc Id:

XP_038344309 ⟸ XM_038488381

RefSeq Acc Id:

XP_038470202 ⟸ XM_038614274

RefSeq Acc Id:	XP_038535542 ⟸ XM_038679614
- UniProtKB:	A0A8C0M6L6 (UniProtKB/TrEMBL), A0A8P0N456 (UniProtKB/TrEMBL), A0A8C0MBU5 (UniProtKB/TrEMBL), A0A8P0SY41 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038406222 ⟸ XM_038550294
- UniProtKB:	A0A8C0M6L6 (UniProtKB/TrEMBL), A0A8C0MBU5 (UniProtKB/TrEMBL), A0A8P0N456 (UniProtKB/TrEMBL), A0A8P0SY41 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845019767 ⟸ ENSCAFT00845025135

RefSeq Acc Id:

ENSCAFP00845019735 ⟸ ENSCAFT00845025083

Promoters

RGD ID:

13684933

Promoter ID:

EPDNEW_C3002

Type:

single initiation site

Name:

TTLL12_1

Description:

tubulin tyrosine ligase like 12

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	10	22,367,410 - 22,367,470	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000909	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030004311	UniProtKB/TrEMBL
	ENSCAFG00845014024	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000001412.5	UniProtKB/TrEMBL
	ENSCAFT00000093814.2	UniProtKB/TrEMBL
	ENSCAFT00030007943.1	UniProtKB/TrEMBL
	ENSCAFT00030008048.1	UniProtKB/TrEMBL
	ENSCAFT00030008121.1	UniProtKB/TrEMBL
	ENSCAFT00845025083.1	UniProtKB/TrEMBL
	ENSCAFT00845025135.1	UniProtKB/TrEMBL
Gene3D-CATH	ATP-grasp fold, B domain	UniProtKB/TrEMBL
InterPro	TTL/TTLL_fam	UniProtKB/TrEMBL
	TTLL12	UniProtKB/TrEMBL
KEGG Report	cfa:474474	UniProtKB/TrEMBL
NCBI Gene	TTLL12	ENTREZGENE
PANTHER	PTHR46088	UniProtKB/TrEMBL
	TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12	UniProtKB/TrEMBL
Pfam	TTL	UniProtKB/TrEMBL
PROSITE	TTL	UniProtKB/TrEMBL
UniProt	A0A8C0M693_CANLF	UniProtKB/TrEMBL
	A0A8C0M6L6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0MBU5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NI92_CANLF	UniProtKB/TrEMBL
	A0A8I3S0J8_CANLF	UniProtKB/TrEMBL
	A0A8P0N456	ENTREZGENE
	A0A8P0SY41	ENTREZGENE
UniProt Secondary	A0A8P0N456	UniProtKB/TrEMBL
	A0A8P0SY41	UniProtKB/TrEMBL
VGNC ID	VGNC:47975	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar