LOC102151683 (signal recognition particle 14 kDa protein-like) - Rat Genome Database

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Gene: LOC102151683 (signal recognition particle 14 kDa protein-like) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: LOC102151683
Name: signal recognition particle 14 kDa protein-like
RGD ID: 12376565
Description: ENCODES a protein that exhibits 7S RNA binding (inferred); endoplasmic reticulum signal peptide binding (inferred); INVOLVED IN SRP-dependent cotranslational protein targeting to membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11829,652,810 - 29,653,502 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1829,330,292 - 29,330,857 (+)NCBI
ROS_Cfam_1.01830,260,319 - 30,260,881 (+)NCBI
UMICH_Zoey_3.11829,798,461 - 29,799,026 (+)NCBI
UNSW_CanFamBas_1.01829,413,522 - 29,414,085 (+)NCBI
UU_Cfam_GSD_1.01830,042,596 - 30,043,161 (+)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium
Low 2 1 1 2
Below cutoff 3 2 10 3 1 3 1 1 5 4 4 3

Sequence


Reference Sequences
RefSeq Acc Id: XM_005631104   ⟹   XP_005631161
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11829,652,810 - 29,653,502 (+)NCBI
Dog10K_Boxer_Tasha1829,330,292 - 29,330,857 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038423500   ⟹   XP_038279428
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01830,260,319 - 30,260,881 (+)NCBI
RefSeq Acc Id: XM_038501751   ⟹   XP_038357679
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11829,798,461 - 29,799,026 (+)NCBI
RefSeq Acc Id: XM_038562454   ⟹   XP_038418382
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01830,042,596 - 30,043,161 (+)NCBI
RefSeq Acc Id: XM_038626549   ⟹   XP_038482477
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01829,413,522 - 29,414,085 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_005631161   ⟸   XM_005631104
- UniProtKB: F1PJ50 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038357679   ⟸   XM_038501751
RefSeq Acc Id: XP_038482477   ⟸   XM_038626549
RefSeq Acc Id: XP_038279428   ⟸   XM_038423500
RefSeq Acc Id: XP_038418382   ⟸   XM_038562454


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC102151683 ENTREZGENE
UniProt F1PJ50 ENTREZGENE