LDAF1 (lipid droplet assembly factor 1)

Gene: LDAF1 (lipid droplet assembly factor 1) Canis lupus familiaris

Analyze

Symbol:

LDAF1 (Ensembl: TMEM159)

Name:

lipid droplet assembly factor 1 (Ensembl:ankyrin repeat and sterile alpha motif domain containing 4B)

RGD ID:

12375002

Description:

INVOLVED IN lipid droplet formation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN brush border (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

promethin; TMEM159; transmembrane protein 159

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	24,254,281 - 24,268,129 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	24,209,125 - 24,267,993 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	25,693,511 - 25,705,828 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	24,407,145 - 24,419,464 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	24,358,101 - 24,419,328 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	24,210,514 - 24,222,833 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	24,102,683 - 24,117,837 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,962 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

brush border assembly (IEA)

lipid droplet formation (ISO)

protein localization to microvillus (IEA)

protein-containing complex assembly (IEA)

response to endoplasmic reticulum stress (IEA)

Cellular Component

brush border (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

lipid droplet (IEA)

membrane (IEA)

microvillus (IEA)

plasma membrane (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

LDAF1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	6	24,254,281 - 24,268,129 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	6	24,209,125 - 24,267,993 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	6	25,693,511 - 25,705,828 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	6	24,407,145 - 24,419,464 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	6	24,358,101 - 24,419,328 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	6	24,210,514 - 24,222,833 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	6	24,102,683 - 24,117,837 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,962 (-)	NCBI		UU_Cfam_GSD_1.0

LDAF1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	21,158,674 - 21,180,616 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	21,158,377 - 21,180,616 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	21,169,995 - 21,191,937 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	21,077,501 - 21,099,431 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	16	20,479,745 - 20,501,782 (+)	NCBI		Celera
Cytogenetic Map	16	p12.3	NCBI
HuRef	16	19,705,255 - 19,727,143 (+)	NCBI		HuRef
CHM1_1	16	21,257,154 - 21,279,197 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	16	21,089,598 - 21,111,555 (+)	NCBI		T2T-CHM13v2.0

Ldaf1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	119,701,599 - 119,720,212 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	119,701,576 - 119,720,215 (+)	Ensembl		GRCm39 Ensembl
GRCm38	7	120,102,342 - 120,120,987 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	120,102,353 - 120,120,992 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	127,245,940 - 127,264,500 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	119,893,575 - 119,912,135 (+)	NCBI		MGSCv36	mm8
Celera	7	120,011,610 - 120,030,538 (+)	NCBI		Celera
Cytogenetic Map	7	F2	NCBI
cM Map	7	64.37	NCBI

Ldaf1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	183,915,919 - 183,934,374 (+)	NCBI		GRCr8
mRatBN7.2	1	174,484,438 - 174,503,037 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	174,484,447 - 174,503,036 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	182,802,178 - 182,820,613 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	189,988,218 - 190,006,655 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	182,721,980 - 182,740,658 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	189,870,596 - 189,889,485 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	189,870,622 - 189,889,484 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	196,800,304 - 196,819,295 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	1	172,234,268 - 172,252,725 (+)	NCBI		Celera
Cytogenetic Map	1	q36	NCBI

Ldaf1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955493	368,399 - 386,716 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955493	368,399 - 386,651 (+)	NCBI	ChiLan1.0	ChiLan1.0

LDAF1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	22,325,762 - 22,348,819 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	26,846,269 - 26,869,348 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	17,227,549 - 17,250,533 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	21,187,479 - 21,210,432 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	21,187,479 - 21,210,432 (+)	Ensembl	panpan1.1		panPan2

Ldaf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	118,258,832 - 118,274,339 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936501	6,356,687 - 6,373,572 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936501	6,356,709 - 6,369,010 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

LDAF1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	3	24,876,637 - 24,910,760 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	3	24,876,631 - 24,910,841 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	3	25,776,868 - 25,782,674 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LDAF1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	19,278,601 - 19,301,339 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	19,278,646 - 19,301,959 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666068	10,578,441 - 10,601,833 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ldaf1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624782	7,243,806 - 7,259,638 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624782	7,244,332 - 7,259,105 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in LDAF1
69 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005621451	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014114573	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022419990	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038478892	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038478893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038478894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038478895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038540135	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038540136	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038540137	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038540138	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038604225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038604226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038604227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038604228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038668947	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038668948	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038668949	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038668950	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_536946	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005621451 ⟹ XP_005621508

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	6	24,254,281 - 24,268,129 (-)	NCBI
Dog10K_Boxer_Tasha	6	25,693,511 - 25,705,828 (-)	NCBI

Sequence:

show sequence

GGCGGAGGACGGCGGCAGCCTGGGTGGGGCAGGAAACAGGCGCCAGCTCCCGCCTGTGCGCACT
AGAGTTCCTCCCTCTAACGTCTCTCCCTGCTCCTCTTCCTCCTCCCCCCACCGCGCTTCTGTGC
CTCCGCCTGCAGACCCTGGCTGGACAGCGCGGCCGCCAGGACCGGTCTCTCTTCTCTACCGACA
CCGCGGAGAGGGGCTCTCCAGGGAACAAAGTGACAGCAAGAGACTGGGTGACATGAGAGATTCA
ACTGTGCCCTGCCCGGGACAGCTTACTGATAGAAGAATTGATCTCTAAAGAGACTGGGCATTGG
TTTCAGGATGGCAAAAGAGGATCCTCCGAGTACCTCAAAGGACTTGCAGGAGCTGCAGAAGAAG
CTGTCTTTGCTGGTAGAGTCCATCCAGAATAACTCAAAGGTGGTTGCCTTTATGAAGTCTCTGG
TGGGTCAATACCTGGACAGGCATCCTTTTCTGGCCCTCAGTGTGCTGGTGTTTGTTGCCATGTC
AGCCGTTCCTGTTGGGTTCTTCCTCCTCATCGTGGTGCTTACCTCCCTGGCTGCTTTTGTGGGG
GTCATTTTACTGGAAGGACTGGTCATCTCAGTGGGCGGCCTCTCACTGCTGTGTGTCCTCTGTG
GTTTGAGCTTTGTATCACTCATCATGTCAGGGACAATCATAGTGTCCTACATCGTGGTCTCCAG
CCTTGTCAACTACTGGTTTCCTCCCAGACTTTTGACACAACAAAACTCCAGTGGCAACTGTCAG
CTGGCTATGAAGTCCGCAGACTTAGAGGGGCTCTACCAGGAATAACCAGCCCAGCGGAGCCAGA
GCTTTTTCCAAGCACCTCTCGAAGGCTGTGGATCATACTCAGCCCTTGGGATTATGACTCAGAA
GGGGGGCGGGAGGTGGTTAAGCACTCCTCGGAAGCATCCTCTAACTTCTTCATTTATGCATAGG
AGCGGGGGGGGGGGGGGGGGGGGGGGGGATTTGGATTTGGGGAGCTCATTGCGCTTGCATGAGT
CCTGGGGTTCTGTTGGCTGGCCTTCCCTCACATGAGAATTAATTGAGAACTGCAGTGGCTCAGC
AGTTCCTCCTGCCTTTCACTCCTCCTCCATGTGCAGACTTGACCTTGGCCCAATTGTGAGCCCC
TGCAGCCTGGCTGCTTGACCCTGGAGGCTCAGATCTTGTGTCCAAGCACCCACTTTGGGGGCAA
CTGTGGATTTCTTTTCTTTTTTTTCTTTCCTTCAGAAAGGAGAGGGGCTGTTTATTTTTCACTT
ATTTGAAGCAAAGTGGGGAAAAGTAATCCAAAACAGAGCAATCTCTTCTGCCTTATTAGCTTTT
TATCAGAAAAACCAGCAATATTTGGCAATAATGCCCTCTCAGACAAAGTTAAAAAACCGAGTCC
AAAGTTAACTTTAGCCAAGGGCACTTTTGAAAAAGTCTAAAGATACAGTTTCTATGTTGAGTAC
TGTTAAGTGCTGTTACTCTTTAAAATATTTGCACTTGATAGTTTTTGTATTGTTTAGAGAACTT
AGCTTAAGCCATTTCTATAAAAAGTCCAATGAAAATGCTAAAGGACTACACAAGCTTTTAAAAT
CCAGTGGGATTTCTACTTCAGTGGTCTGTGGCATTTTATTAAATATTTATTAGATGAGCTTTTT
TTTTCTTCACCCCTGAGACATCAGACCCACTTTTTCCTTCTCTGTTGATTTCATGGCAGATCCC
AGGTAATAGGGCTGATGATAAGACACTCCACCTAAAGTGGCTTTAAAAAGGGGGGAAGGGAGCA
GAAGAGGGGAGTTCATTTCACTCAACTAAAAAGCCAGGGTGTAGATTTTCAGGCACTGCTGGAT
CCAGAGACTCAAGTGGCATCTTGAGGCATCTCTCCCCCTTCATCCCTCAGCATTGCTTTCTTCG
TGTGAGCTGTTTTTCCAGGCAGGTCCTGCATATGTGGAGGCCCCAGCAGCTCTGGCTTTATGTC
AGCCCCATGGTTAGTACTCTGCATCTGCAGTGATGAGGAAGCTGCCTCACCCACCAGCACCTGC
AGATATTCTGACTTTGGGGCTGATTGCACAGACTTGGGTCATGTGAACAACCCTGACCCAATCA
GTGACCAGGAGGGTAGACTATGCTGATGGAGCAGGGATGGGCCATAAGTCAATGCTTTAGTAAC
CAGGGGATGTTTTAGGTCAACCCCATTGGTTTCACGTAGGGTGGGGTGCATACTCCCAAAGGAA
TATGAGAAGGAGAGGAAATATTTGCTGAGCAGACAAAATAAAAACCTGCTACTTGCATCAGTAG
GACATAAAGGCTTTAATCTGGAAACTTCTGAGTCCCATGAAGGCCATGCCTGTCCCTAAAGGTG
GCTTTACCTCTTAAAGAACAAGAACTGCCTGTTCCTGCCAGTATATGGAGTATTAATACTTGGT
ATTTATTAAACATTTCTTTTCTTCATGTAAA

hide sequence

RefSeq Acc Id:

XM_014114573 ⟹ XP_013970048

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	6	24,254,281 - 24,268,129 (-)	NCBI
Dog10K_Boxer_Tasha	6	25,693,511 - 25,705,828 (-)	NCBI

Sequence:

show sequence

GGCGGAGGACGGCGGCAGCCTGGGTGGGGCAGGAAACAGGCGCCAGCTCCCGCCTGTGCGCACT
AGAGTTCCTCCCTCTAACGTCTCTCCCTGCTCCTCTTCCTCCTCCCCCCACCGCGCTTCTGTGC
CTCCGCCTGCAGACCCTGGCTGGACAGCGCGGCCGCCAGGACCGGTCTCTCTTCTCTACCGACA
CCGCGGAGAGGGGCTCTCCAGGGAACAAAGGTGGATTCTTCTCCCCCACATTAATGACCGGTGA
CAGCAAGAGACTGGGTGACATGAGAGATTCAACTGTGCCCTGCCCGGGACAGCTTACTGATAGA
AGAATTGATCTCTAAAGAGACTGGGCATTGGTTTCAGGATGGCAAAAGAGGATCCTCCGAGTAC
CTCAAAGGACTTGCAGGAGCTGCAGAAGAAGCTGTCTTTGCTGGTAGAGTCCATCCAGAATAAC
TCAAAGGTGGTTGCCTTTATGAAGTCTCTGGTGGGTCAATACCTGGACAGGCATCCTTTTCTGG
CCCTCAGTGTGCTGGTGTTTGTTGCCATGTCAGCCGTTCCTGTTGGGTTCTTCCTCCTCATCGT
GGTGCTTACCTCCCTGGCTGCTTTTGTGGGGGTCATTTTACTGGAAGGACTGGTCATCTCAGTG
GGCGGCCTCTCACTGCTGTGTGTCCTCTGTGGTTTGAGCTTTGTATCACTCATCATGTCAGGGA
CAATCATAGTGTCCTACATCGTGGTCTCCAGCCTTGTCAACTACTGGTTTCCTCCCAGACTTTT
GACACAACAAAACTCCAGTGGCAACTGTCAGCTGGCTATGAAGTCCGCAGACTTAGAGGGGCTC
TACCAGGAATAACCAGCCCAGCGGAGCCAGAGCTTTTTCCAAGCACCTCTCGAAGGCTGTGGAT
CATACTCAGCCCTTGGGATTATGACTCAGAAGGGGGGCGGGAGGTGGTTAAGCACTCCTCGGAA
GCATCCTCTAACTTCTTCATTTATGCATAGGAGCGGGGGGGGGGGGGGGGGGGGGGGGGATTTG
GATTTGGGGAGCTCATTGCGCTTGCATGAGTCCTGGGGTTCTGTTGGCTGGCCTTCCCTCACAT
GAGAATTAATTGAGAACTGCAGTGGCTCAGCAGTTCCTCCTGCCTTTCACTCCTCCTCCATGTG
CAGACTTGACCTTGGCCCAATTGTGAGCCCCTGCAGCCTGGCTGCTTGACCCTGGAGGCTCAGA
TCTTGTGTCCAAGCACCCACTTTGGGGGCAACTGTGGATTTCTTTTCTTTTTTTTCTTTCCTTC
AGAAAGGAGAGGGGCTGTTTATTTTTCACTTATTTGAAGCAAAGTGGGGAAAAGTAATCCAAAA
CAGAGCAATCTCTTCTGCCTTATTAGCTTTTTATCAGAAAAACCAGCAATATTTGGCAATAATG
CCCTCTCAGACAAAGTTAAAAAACCGAGTCCAAAGTTAACTTTAGCCAAGGGCACTTTTGAAAA
AGTCTAAAGATACAGTTTCTATGTTGAGTACTGTTAAGTGCTGTTACTCTTTAAAATATTTGCA
CTTGATAGTTTTTGTATTGTTTAGAGAACTTAGCTTAAGCCATTTCTATAAAAAGTCCAATGAA
AATGCTAAAGGACTACACAAGCTTTTAAAATCCAGTGGGATTTCTACTTCAGTGGTCTGTGGCA
TTTTATTAAATATTTATTAGATGAGCTTTTTTTTTCTTCACCCCTGAGACATCAGACCCACTTT
TTCCTTCTCTGTTGATTTCATGGCAGATCCCAGGTAATAGGGCTGATGATAAGACACTCCACCT
AAAGTGGCTTTAAAAAGGGGGGAAGGGAGCAGAAGAGGGGAGTTCATTTCACTCAACTAAAAAG
CCAGGGTGTAGATTTTCAGGCACTGCTGGATCCAGAGACTCAAGTGGCATCTTGAGGCATCTCT
CCCCCTTCATCCCTCAGCATTGCTTTCTTCGTGTGAGCTGTTTTTCCAGGCAGGTCCTGCATAT
GTGGAGGCCCCAGCAGCTCTGGCTTTATGTCAGCCCCATGGTTAGTACTCTGCATCTGCAGTGA
TGAGGAAGCTGCCTCACCCACCAGCACCTGCAGATATTCTGACTTTGGGGCTGATTGCACAGAC
TTGGGTCATGTGAACAACCCTGACCCAATCAGTGACCAGGAGGGTAGACTATGCTGATGGAGCA
GGGATGGGCCATAAGTCAATGCTTTAGTAACCAGGGGATGTTTTAGGTCAACCCCATTGGTTTC
ACGTAGGGTGGGGTGCATACTCCCAAAGGAATATGAGAAGGAGAGGAAATATTTGCTGAGCAGA
CAAAATAAAAACCTGCTACTTGCATCAGTAGGACATAAAGGCTTTAATCTGGAAACTTCTGAGT
CCCATGAAGGCCATGCCTGTCCCTAAAGGTGGCTTTACCTCTTAAAGAACAAGAACTGCCTGTT
CCTGCCAGTATATGGAGTATTAATACTTGGTATTTATTAAACATTTCTTTTCTTCATGTAAA

hide sequence

RefSeq Acc Id:

XM_022419990 ⟹ XP_022275698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	6	24,254,281 - 24,267,196 (-)	NCBI
Dog10K_Boxer_Tasha	6	25,693,511 - 25,704,895 (-)	NCBI

Sequence:

show sequence

GGCCCGGGAGAAGGCAAGGAACTTGTGAGCCGCGCTGGGGATCCCAGGTTGCCCTCCGCTCCAG
AGACTTCTCAGTGCCTGGGAGTTCCCTCTGTAGAGTGGCTGGGGATTGGAAGCCAGTGACAGCA
AGAGACTGGGTGACATGAGAGATTCAACTGTGCCCTGCCCGGGACAGCTTACTGATAGAAGAAT
TGATCTCTAAAGAGACTGGGCATTGGTTTCAGGATGGCAAAAGAGGATCCTCCGAGTACCTCAA
AGGACTTGCAGGAGCTGCAGAAGAAGCTGTCTTTGCTGGTAGAGTCCATCCAGAATAACTCAAA
GGTGGTTGCCTTTATGAAGTCTCTGGTGGGTCAATACCTGGACAGGCATCCTTTTCTGGCCCTC
AGTGTGCTGGTGTTTGTTGCCATGTCAGCCGTTCCTGTTGGGTTCTTCCTCCTCATCGTGGTGC
TTACCTCCCTGGCTGCTTTTGTGGGGGTCATTTTACTGGAAGGACTGGTCATCTCAGTGGGCGG
CCTCTCACTGCTGTGTGTCCTCTGTGGTTTGAGCTTTGTATCACTCATCATGTCAGGGACAATC
ATAGTGTCCTACATCGTGGTCTCCAGCCTTGTCAACTACTGGTTTCCTCCCAGACTTTTGACAC
AACAAAACTCCAGTGGCAACTGTCAGCTGGCTATGAAGTCCGCAGACTTAGAGGGGCTCTACCA
GGAATAACCAGCCCAGCGGAGCCAGAGCTTTTTCCAAGCACCTCTCGAAGGCTGTGGATCATAC
TCAGCCCTTGGGATTATGACTCAGAAGGGGGGCGGGAGGTGGTTAAGCACTCCTCGGAAGCATC
CTCTAACTTCTTCATTTATGCATAGGAGCGGGGGGGGGGGGGGGGGGGGGGGGGATTTGGATTT
GGGGAGCTCATTGCGCTTGCATGAGTCCTGGGGTTCTGTTGGCTGGCCTTCCCTCACATGAGAA
TTAATTGAGAACTGCAGTGGCTCAGCAGTTCCTCCTGCCTTTCACTCCTCCTCCATGTGCAGAC
TTGACCTTGGCCCAATTGTGAGCCCCTGCAGCCTGGCTGCTTGACCCTGGAGGCTCAGATCTTG
TGTCCAAGCACCCACTTTGGGGGCAACTGTGGATTTCTTTTCTTTTTTTTCTTTCCTTCAGAAA
GGAGAGGGGCTGTTTATTTTTCACTTATTTGAAGCAAAGTGGGGAAAAGTAATCCAAAACAGAG
CAATCTCTTCTGCCTTATTAGCTTTTTATCAGAAAAACCAGCAATATTTGGCAATAATGCCCTC
TCAGACAAAGTTAAAAAACCGAGTCCAAAGTTAACTTTAGCCAAGGGCACTTTTGAAAAAGTCT
AAAGATACAGTTTCTATGTTGAGTACTGTTAAGTGCTGTTACTCTTTAAAATATTTGCACTTGA
TAGTTTTTGTATTGTTTAGAGAACTTAGCTTAAGCCATTTCTATAAAAAGTCCAATGAAAATGC
TAAAGGACTACACAAGCTTTTAAAATCCAGTGGGATTTCTACTTCAGTGGTCTGTGGCATTTTA
TTAAATATTTATTAGATGAGCTTTTTTTTTCTTCACCCCTGAGACATCAGACCCACTTTTTCCT
TCTCTGTTGATTTCATGGCAGATCCCAGGTAATAGGGCTGATGATAAGACACTCCACCTAAAGT
GGCTTTAAAAAGGGGGGAAGGGAGCAGAAGAGGGGAGTTCATTTCACTCAACTAAAAAGCCAGG
GTGTAGATTTTCAGGCACTGCTGGATCCAGAGACTCAAGTGGCATCTTGAGGCATCTCTCCCCC
TTCATCCCTCAGCATTGCTTTCTTCGTGTGAGCTGTTTTTCCAGGCAGGTCCTGCATATGTGGA
GGCCCCAGCAGCTCTGGCTTTATGTCAGCCCCATGGTTAGTACTCTGCATCTGCAGTGATGAGG
AAGCTGCCTCACCCACCAGCACCTGCAGATATTCTGACTTTGGGGCTGATTGCACAGACTTGGG
TCATGTGAACAACCCTGACCCAATCAGTGACCAGGAGGGTAGACTATGCTGATGGAGCAGGGAT
GGGCCATAAGTCAATGCTTTAGTAACCAGGGGATGTTTTAGGTCAACCCCATTGGTTTCACGTA
GGGTGGGGTGCATACTCCCAAAGGAATATGAGAAGGAGAGGAAATATTTGCTGAGCAGACAAAA
TAAAAACCTGCTACTTGCATCAGTAGGACATAAAGGCTTTAATCTGGAAACTTCTGAGTCCCAT
GAAGGCCATGCCTGTCCCTAAAGGTGGCTTTACCTCTTAAAGAACAAGAACTGCCTGTTCCTGC
CAGTATATGGAGTATTAATACTTGGTATTTATTAAACATTTCTTTTCTTCATGTAAA

hide sequence

RefSeq Acc Id:

XM_038478892 ⟹ XP_038334820

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	6	24,210,514 - 24,222,833 (-)	NCBI

RefSeq Acc Id:

XM_038478893 ⟹ XP_038334821

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	6	24,210,514 - 24,222,833 (-)	NCBI

RefSeq Acc Id:

XM_038478894 ⟹ XP_038334822

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	6	24,210,514 - 24,222,833 (-)	NCBI

RefSeq Acc Id:

XM_038478895 ⟹ XP_038334823

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	6	24,210,514 - 24,221,898 (-)	NCBI

RefSeq Acc Id:

XM_038540135 ⟹ XP_038396063

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,962 (-)	NCBI

RefSeq Acc Id:

XM_038540136 ⟹ XP_038396064

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,962 (-)	NCBI

RefSeq Acc Id:

XM_038540137 ⟹ XP_038396065

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,962 (-)	NCBI

RefSeq Acc Id:

XM_038540138 ⟹ XP_038396066

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	6	24,489,635 - 24,501,032 (-)	NCBI

RefSeq Acc Id:

XM_038604225 ⟹ XP_038460153

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	6	24,102,683 - 24,117,837 (-)	NCBI

RefSeq Acc Id:

XM_038604226 ⟹ XP_038460154

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	6	24,102,683 - 24,117,837 (-)	NCBI

RefSeq Acc Id:

XM_038604227 ⟹ XP_038460155

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	6	24,102,683 - 24,117,837 (-)	NCBI

RefSeq Acc Id:

XM_038604228 ⟹ XP_038460156

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	6	24,102,683 - 24,116,904 (-)	NCBI

RefSeq Acc Id:

XM_038668947 ⟹ XP_038524875

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	6	24,407,145 - 24,419,464 (-)	NCBI

RefSeq Acc Id:

XM_038668948 ⟹ XP_038524876

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	6	24,407,145 - 24,419,464 (-)	NCBI

RefSeq Acc Id:

XM_038668949 ⟹ XP_038524877

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	6	24,407,145 - 24,419,464 (-)	NCBI

RefSeq Acc Id:

XM_038668950 ⟹ XP_038524878

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	6	24,407,145 - 24,418,529 (-)	NCBI

RefSeq Acc Id:

XM_536946 ⟹ XP_536946

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	6	24,254,281 - 24,268,129 (-)	NCBI
Dog10K_Boxer_Tasha	6	25,693,511 - 25,705,828 (-)	NCBI

Sequence:

show sequence

GGCGGAGGACGGCGGCAGCCTGGGTGGGGCAGGAAACAGGCGCCAGCTCCCGCCTGTGCGCACT
AGAGTTCCTCCCTCTAACGTCTCTCCCTGCTCCTCTTCCTCCTCCCCCCACCGCGCTTCTGTGC
CTCCGCCTGCAGACCCTGGCTGGACAGCGCGGCCGCCAGGACCGTGACAGCAAGAGACTGGGTG
ACATGAGAGATTCAACTGTGCCCTGCCCGGGACAGCTTACTGATAGAAGAATTGATCTCTAAAG
AGACTGGGCATTGGTTTCAGGATGGCAAAAGAGGATCCTCCGAGTACCTCAAAGGACTTGCAGG
AGCTGCAGAAGAAGCTGTCTTTGCTGGTAGAGTCCATCCAGAATAACTCAAAGGTGGTTGCCTT
TATGAAGTCTCTGGTGGGTCAATACCTGGACAGGCATCCTTTTCTGGCCCTCAGTGTGCTGGTG
TTTGTTGCCATGTCAGCCGTTCCTGTTGGGTTCTTCCTCCTCATCGTGGTGCTTACCTCCCTGG
CTGCTTTTGTGGGGGTCATTTTACTGGAAGGACTGGTCATCTCAGTGGGCGGCCTCTCACTGCT
GTGTGTCCTCTGTGGTTTGAGCTTTGTATCACTCATCATGTCAGGGACAATCATAGTGTCCTAC
ATCGTGGTCTCCAGCCTTGTCAACTACTGGTTTCCTCCCAGACTTTTGACACAACAAAACTCCA
GTGGCAACTGTCAGCTGGCTATGAAGTCCGCAGACTTAGAGGGGCTCTACCAGGAATAACCAGC
CCAGCGGAGCCAGAGCTTTTTCCAAGCACCTCTCGAAGGCTGTGGATCATACTCAGCCCTTGGG
ATTATGACTCAGAAGGGGGGCGGGAGGTGGTTAAGCACTCCTCGGAAGCATCCTCTAACTTCTT
CATTTATGCATAGGAGCGGGGGGGGGGGGGGGGGGGGGGGGGATTTGGATTTGGGGAGCTCATT
GCGCTTGCATGAGTCCTGGGGTTCTGTTGGCTGGCCTTCCCTCACATGAGAATTAATTGAGAAC
TGCAGTGGCTCAGCAGTTCCTCCTGCCTTTCACTCCTCCTCCATGTGCAGACTTGACCTTGGCC
CAATTGTGAGCCCCTGCAGCCTGGCTGCTTGACCCTGGAGGCTCAGATCTTGTGTCCAAGCACC
CACTTTGGGGGCAACTGTGGATTTCTTTTCTTTTTTTTCTTTCCTTCAGAAAGGAGAGGGGCTG
TTTATTTTTCACTTATTTGAAGCAAAGTGGGGAAAAGTAATCCAAAACAGAGCAATCTCTTCTG
CCTTATTAGCTTTTTATCAGAAAAACCAGCAATATTTGGCAATAATGCCCTCTCAGACAAAGTT
AAAAAACCGAGTCCAAAGTTAACTTTAGCCAAGGGCACTTTTGAAAAAGTCTAAAGATACAGTT
TCTATGTTGAGTACTGTTAAGTGCTGTTACTCTTTAAAATATTTGCACTTGATAGTTTTTGTAT
TGTTTAGAGAACTTAGCTTAAGCCATTTCTATAAAAAGTCCAATGAAAATGCTAAAGGACTACA
CAAGCTTTTAAAATCCAGTGGGATTTCTACTTCAGTGGTCTGTGGCATTTTATTAAATATTTAT
TAGATGAGCTTTTTTTTTCTTCACCCCTGAGACATCAGACCCACTTTTTCCTTCTCTGTTGATT
TCATGGCAGATCCCAGGTAATAGGGCTGATGATAAGACACTCCACCTAAAGTGGCTTTAAAAAG
GGGGGAAGGGAGCAGAAGAGGGGAGTTCATTTCACTCAACTAAAAAGCCAGGGTGTAGATTTTC
AGGCACTGCTGGATCCAGAGACTCAAGTGGCATCTTGAGGCATCTCTCCCCCTTCATCCCTCAG
CATTGCTTTCTTCGTGTGAGCTGTTTTTCCAGGCAGGTCCTGCATATGTGGAGGCCCCAGCAGC
TCTGGCTTTATGTCAGCCCCATGGTTAGTACTCTGCATCTGCAGTGATGAGGAAGCTGCCTCAC
CCACCAGCACCTGCAGATATTCTGACTTTGGGGCTGATTGCACAGACTTGGGTCATGTGAACAA
CCCTGACCCAATCAGTGACCAGGAGGGTAGACTATGCTGATGGAGCAGGGATGGGCCATAAGTC
AATGCTTTAGTAACCAGGGGATGTTTTAGGTCAACCCCATTGGTTTCACGTAGGGTGGGGTGCA
TACTCCCAAAGGAATATGAGAAGGAGAGGAAATATTTGCTGAGCAGACAAAATAAAAACCTGCT
ACTTGCATCAGTAGGACATAAAGGCTTTAATCTGGAAACTTCTGAGTCCCATGAAGGCCATGCC
TGTCCCTAAAGGTGGCTTTACCTCTTAAAGAACAAGAACTGCCTGTTCCTGCCAGTATATGGAG
TATTAATACTTGGTATTTATTAAACATTTCTTTTCTTCATGTAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005621508	(Get FASTA)	NCBI Sequence Viewer
	XP_013970048	(Get FASTA)	NCBI Sequence Viewer
	XP_022275698	(Get FASTA)	NCBI Sequence Viewer
	XP_038334820	(Get FASTA)	NCBI Sequence Viewer
	XP_038334821	(Get FASTA)	NCBI Sequence Viewer
	XP_038334822	(Get FASTA)	NCBI Sequence Viewer
	XP_038334823	(Get FASTA)	NCBI Sequence Viewer
	XP_038396063	(Get FASTA)	NCBI Sequence Viewer
	XP_038396064	(Get FASTA)	NCBI Sequence Viewer
	XP_038396065	(Get FASTA)	NCBI Sequence Viewer
	XP_038396066	(Get FASTA)	NCBI Sequence Viewer
	XP_038460153	(Get FASTA)	NCBI Sequence Viewer
	XP_038460154	(Get FASTA)	NCBI Sequence Viewer
	XP_038460155	(Get FASTA)	NCBI Sequence Viewer
	XP_038460156	(Get FASTA)	NCBI Sequence Viewer
	XP_038524875	(Get FASTA)	NCBI Sequence Viewer
	XP_038524876	(Get FASTA)	NCBI Sequence Viewer
	XP_038524877	(Get FASTA)	NCBI Sequence Viewer
	XP_038524878	(Get FASTA)	NCBI Sequence Viewer
	XP_536946	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000026290.4
	ENSCAFP00000030556.3
	ENSCAFP00000063298.1
	ENSCAFP00000071279.1
	ENSCAFP00030010570.1
	ENSCAFP00030010598.1
	ENSCAFP00030010609.1
	ENSCAFP00040023209.1
	ENSCAFP00040023278.1
	ENSCAFP00040023301.1
	ENSCAFP00845004755.1
	ENSCAFP00845004765.1
	ENSCAFP00845004776
	ENSCAFP00845004776.1
	ENSCAFP00845004786.1

RefSeq Acc Id:	XP_536946 ⟸ XM_536946
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKEDPPSTSKDLQELQKKLSLLVESIQNNSKVVAFMKSLVGQYLDRHPFLALSVLVFVAMSAV PVGFFLLIVVLTSLAAFVGVILLEGLVISVGGLSLLCVLCGLSFVSLIMSGTIIVSYIVVSSLV NYWFPPRLLTQQNSSGNCQLAMKSADLEGLYQE hide sequence

RefSeq Acc Id:	XP_005621508 ⟸ XM_005621451
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKEDPPSTSKDLQELQKKLSLLVESIQNNSKVVAFMKSLVGQYLDRHPFLALSVLVFVAMSAV PVGFFLLIVVLTSLAAFVGVILLEGLVISVGGLSLLCVLCGLSFVSLIMSGTIIVSYIVVSSLV NYWFPPRLLTQQNSSGNCQLAMKSADLEGLYQE hide sequence

RefSeq Acc Id:	XP_013970048 ⟸ XM_014114573
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKEDPPSTSKDLQELQKKLSLLVESIQNNSKVVAFMKSLVGQYLDRHPFLALSVLVFVAMSAV PVGFFLLIVVLTSLAAFVGVILLEGLVISVGGLSLLCVLCGLSFVSLIMSGTIIVSYIVVSSLV NYWFPPRLLTQQNSSGNCQLAMKSADLEGLYQE hide sequence

RefSeq Acc Id:	XP_022275698 ⟸ XM_022419990
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKEDPPSTSKDLQELQKKLSLLVESIQNNSKVVAFMKSLVGQYLDRHPFLALSVLVFVAMSAV PVGFFLLIVVLTSLAAFVGVILLEGLVISVGGLSLLCVLCGLSFVSLIMSGTIIVSYIVVSSLV NYWFPPRLLTQQNSSGNCQLAMKSADLEGLYQE hide sequence

RefSeq Acc Id:

XP_038334820 ⟸ XM_038478892

RefSeq Acc Id:

XP_038334822 ⟸ XM_038478894

RefSeq Acc Id:

XP_038334821 ⟸ XM_038478893

RefSeq Acc Id:

XP_038334823 ⟸ XM_038478895

RefSeq Acc Id:

XP_038460153 ⟸ XM_038604225

RefSeq Acc Id:

XP_038460155 ⟸ XM_038604227

RefSeq Acc Id:

XP_038460154 ⟸ XM_038604226

RefSeq Acc Id:

XP_038460156 ⟸ XM_038604228

RefSeq Acc Id:	XP_038524875 ⟸ XM_038668947
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038524877 ⟸ XM_038668949
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038524876 ⟸ XM_038668948
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038524878 ⟸ XM_038668950
- UniProtKB:	A0A8C0SM89 (UniProtKB/TrEMBL), A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038396063 ⟸ XM_038540135
- UniProtKB:	A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8C0SM89 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038396065 ⟸ XM_038540137
- UniProtKB:	A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8C0SM89 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038396064 ⟸ XM_038540136
- UniProtKB:	A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8C0SM89 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038396066 ⟸ XM_038540138
- UniProtKB:	A0A8C0LAQ8 (UniProtKB/TrEMBL), A0A8C0SM89 (UniProtKB/TrEMBL), A0A8I3MSI6 (UniProtKB/TrEMBL), A0A8I3N569 (UniProtKB/TrEMBL), A0A8P0PLB9 (UniProtKB/TrEMBL)

Protein Domains

SAM

Promoters

RGD ID:

13683669

Promoter ID:

EPDNEW_C1736

Type:

initiation region

Name:

TMEM159_1

Description:

transmembrane protein 159

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	6	24,268,092 - 24,268,152	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000017810	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006534	UniProtKB/TrEMBL
	ENSCAFG00040014484	UniProtKB/TrEMBL
	ENSCAFG00845003348	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000028269.5	UniProtKB/TrEMBL
	ENSCAFT00000035311.5	UniProtKB/TrEMBL
	ENSCAFT00000083768.2	UniProtKB/TrEMBL
	ENSCAFT00000108910.1	UniProtKB/TrEMBL
	ENSCAFT00030012073.1	UniProtKB/TrEMBL
	ENSCAFT00030012113.1	UniProtKB/TrEMBL
	ENSCAFT00030012129.1	UniProtKB/TrEMBL
	ENSCAFT00040026715.1	UniProtKB/TrEMBL
	ENSCAFT00040026790.1	UniProtKB/TrEMBL
	ENSCAFT00040026813.1	UniProtKB/TrEMBL
	ENSCAFT00845005974.1	UniProtKB/TrEMBL
	ENSCAFT00845005994.1	UniProtKB/TrEMBL
	ENSCAFT00845006011	ENTREZGENE
	ENSCAFT00845006011.1	UniProtKB/TrEMBL
	ENSCAFT00845006024.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.150.50	UniProtKB/TrEMBL
	1.25.40.20	UniProtKB/TrEMBL
InterPro	ANKS4B_SAM	UniProtKB/TrEMBL
	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	LDAF1	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
	SAM/pointed_sf	UniProtKB/TrEMBL
KEGG Report	cfa:479819	UniProtKB/TrEMBL
NCBI Gene	TMEM159	ENTREZGENE
PANTHER	LIPID DROPLET ASSEMBLY FACTOR 1	UniProtKB/TrEMBL
	PTHR14275	UniProtKB/TrEMBL
Pfam	Ank_2	UniProtKB/TrEMBL
	Promethin	UniProtKB/TrEMBL
	SAM_1	UniProtKB/TrEMBL
PROSITE	ANK_REP_REGION	UniProtKB/TrEMBL
	ANK_REPEAT	UniProtKB/TrEMBL
SMART	ANK	UniProtKB/TrEMBL
	SAM	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47769	UniProtKB/TrEMBL
	SSF48403	UniProtKB/TrEMBL
UniProt	A0A8C0LAQ8	ENTREZGENE
	A0A8C0SM89	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SME2_CANLF	UniProtKB/TrEMBL
	A0A8C0SP75_CANLF	UniProtKB/TrEMBL
	A0A8I3MK38_CANLF	UniProtKB/TrEMBL
	A0A8I3MSI6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N569	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RRB8_CANLF	UniProtKB/TrEMBL
	A0A8P0PLB9	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:47487	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2021-03-15	LDAF1	lipid droplet assembly factor 1	TMEM159	transmembrane protein 159	Symbol and/or name change	19259463	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar