LOC102156626 (membrane cofactor protein-like)

Gene: LOC102156626 (membrane cofactor protein-like) Canis lupus familiaris

Analyze

No known orthologs.

Symbol:

LOC102156626

Name:

membrane cofactor protein-like

RGD ID:

12373574

Description:

ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN positive regulation of proteolysis (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); age related macular degeneration (ortholog); kidney disease (ortholog); FOUND IN acrosomal vesicle (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

RGD Orthologs

Alliance Genes

More Info

homologs ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	6,552,121 - 6,581,316 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	6,114,430 - 6,144,443 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	6,240,211 - 6,268,997 (+)	NCBI		ROS_Cfam_1.0
UMICH_Zoey_3.1	7	6,173,438 - 6,203,217 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	6,275,610 - 6,305,657 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	6,316,510 - 6,346,562 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute necrotizing pancreatitis (ISO)

age related macular degeneration (ISO)

kidney disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of proteolysis (ISO)

single fertilization (IEA)

Cellular Component

acrosomal vesicle (ISO)

basolateral plasma membrane (ISO)

cell surface (IEA,ISO)

inner acrosomal membrane (IEA,ISO)

membrane (IEA)

Molecular Function

endopeptidase activity (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Variants

Variants in LOC102156626
385 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium										8
Low	5	4	21	6	6	6	6	4	10		10	6
Below cutoff		1	1					2	2

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005622316	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014115068	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014115069	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022420858	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022420859	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022420860	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038480699	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542026	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542027	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038542029	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606174	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038606177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038670871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038670872	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038670873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038670875	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000080	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000093	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000007	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_005622316 ⟹ XP_005622373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	6,552,124 - 6,581,316 (+)	NCBI
Dog10K_Boxer_Tasha	7	6,114,430 - 6,144,443 (+)	NCBI

Sequence:

show sequence

GTGGGGGGATTGTGGCGTGGGGTGCCAGTCCTCGGGGAGGAGTCCTCCCGGCCGGCTCGTAGGC
TCCCGCTGGGCACCTGCAAGATGAAGGCGTCCCGCGCACCGCGCACCTGCTGTCCCTGCTGCCC
GGAGAAGCGCTTTTCTTGGCGCTTGGTCGGGATCCTTTTGGTGGCCCCAGTGCTCCTGCTTTCT
CTAAACTGTGATGCCTGTGGTGAACCACCAAAATATGACTCTATGACGCTGAAGAGTATCCTTA
AAAACTATTATGCAGTTGGGGAGAAAATATTTTATAAGTGTAATCCAGGGTACTACATTACGTT
TCCTGTCTCGACTTATTGTGAGAAGAATCACTCATGGTTCCCTATCCCAGAAGGTTGTTCAAAG
AAAGAATGTAATTATCCAAGACTCAAAAATGGTGAATTCATTTTCCCAAATTTCACCTCGGGAT
TTAATGATCAAGTTCACTTTCATTGTGATGAGGGTTATCACTTAGAAGGAGAAGCAATTTTGAC
TTGCAACCTTCAAGGAGATGAGGTGTATTGGAGTGATGAATTCCCACAATGTGAAAAGATTTAC
TGTCAACCACCTGCAAAAATAAAAAATGGAAAACACACCAATAGCCACAGAACTATTTTTGAAT
ATAATGAATTAATTACTTTTAGTTGTAATCGTTTAAAAGGATCAGATCAATATTCCCTTGTTGG
AGAAAGAGAACTTACTTGTATTGAGAAAAACAAGTGGAGTAGTCGCCCTCCTCAGTGTAAAGTG
GTCAAATGTGACTATCCAGTAATTGAACATGGAAGACTGATATCAGGAATCAAAGAAAAATATT
ACTACCAAGCAATGGTTCTACTTGAATGCCTCCCAGGCTTCTATCTTAATGGCAGCAACAGAGT
GTTCTGTGGTGAGAATAGTACTTGGGATCCTAAAATACCAAAATGTATTAAAGGTTTCAAGCCT
ACTCATCCAACCAAACCTCCAGTTTCAAGATATCCAGGTTATCCTGAGGCCAACGAATATCTAT
CAGTTGAAGACTTTGAAGAATTAGATGTAGGCATCCTTGCTGTGATTGTTCTCACTATCCTTGT
TGGCATCGTGGTACTTTGCACCTGCCTGTACAGATGTCTTAAAAGGGAGAAGAAAGGCTACCAA
TTAATGGATCTTGCAACCTGAGCCTCTGGTTTAATTTAAGATGGCAACGTTGGAGGACCCTAAA
CTCACCTCCTTCTCACATGCACGGAATCTACAGCTACATACAGAGCAGTTCTCTTGGAAAGAAA
TCTGAAAACTAACTGGATGGACTCCTATACATTGGTGGATAAAACACACATCAAGGGGCACCTG
GCTGGCTTAGTCAATGGAGCATCTGACTCTTGACCTTGGGGTCATGACTTCAAGCCCCACATGG
GACGTGGAGCCTGCTTTAAAAAAAAAAAAAAAAAAAACAAAATTCACATCAAAATGGATAGGAG
AGACTGGGATAGTATTTCACCATAAACTCCTCCCCAAATGTGGTAACCCACAGTCAGGCAGGAA
ACTCACAACTCTGAGCGGCTTCCTGGGAAGCAAAATATTTGAACCCCACATCTGGCACCCCATC
CTTTAAGACCTGCACCGGAGAGATGGGTCTGCAAAACATCTAGCTTTGAAAGCCAATGGGGTTT
ATGTCTAGCAGGCTATATATAGCAAACTGAGAAACAGTTCTTGTAGTGCTCCTGTGGATTGACT
TTGGCTAACCCCCCAGGGTACAATGGAGAGGCAGCTGTCTGAAACGCCTTGTCTTCCAGTGAAA
GAGACCTATTTGCATGTCTTAAAAACTTTGGCGTGAAGGGCAGGCATCTAATGTCATACACACC
TAGCAG

hide sequence

RefSeq Acc Id:

XM_022420858 ⟹ XP_022276566

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	6,552,124 - 6,581,316 (+)	NCBI
Dog10K_Boxer_Tasha	7	6,114,431 - 6,144,443 (+)	NCBI

Sequence:

show sequence

GTGGGGGGATTGTGGCGTGGGGTGCCAGTCCTCGGGGAGGAGTCCTCCCGGCCGGCTCGTAGGC
TCCCGCTGGGCACCTGCAAGATGAAGGCGTCCCGCGCACCGCGCACCTGCTGTCCCTGCTGCCC
GGAGAAGCGCTTTTCTTGGCGCTTGGTCGGGATCCTTTTGGTGGCCCCAGTGCTCCTGCTTTCT
CTAAACTGTGATGCCTGTGGTGAACCACCAAAATATGACTCTATGACGCTGAAGAGTATCCTTA
AAAACTATTATGCAGTTGGGGAGAAAATATTTTATAAGTGTAATCCAGGGTACTACATTACGTT
TCCTGTCTCGACTTATTGTGAGAAGAATCACTCATGGTTCCCTATCCCAGAAGGTTGTTCAAAG
AAAGAATGTAATTATCCAAGACTCAAAAATGGTGAATTCATTTTCCCAAATTTCACCTCGGGAT
TTAATGATCAAGTTCACTTTCATTGTGATGAGGGTTATCACTTAGAAGGAGAAGCAATTTTGAC
TTGCAACCTTCAAGGAGATGAGGTGTATTGGAGTGATGAATTCCCACAATGTGAAAAGATTTAC
TGTCAACCACCTGCAAAAATAAAAAATGGAAAACACACCAATAGCCACAGAACTATTTTTGAAT
ATAATGAATTAATTACTTTTAGTTGTAATCGTTTAAAAGGATCAGATCAATATTCCCTTGTTGG
AGAAAGAGAACTTACTTGTATTGAGAAAAACAAGTGGAGTAGTCGCCCTCCTCAGTGTAAAGTG
GTCAAATGTGACTATCCAGTAATTGAACATGGAAGACTGATATCAGGAATCAAAGAAAAATATT
ACTACCAAGCAATGGTTCTACTTGAATGCCTCCCAGGCTTCTATCTTAATGGCAGCAACAGAGT
GTTCTGTGGTGAGAATAGTACTTGGGATCCTAAAATACCAAAATGTATTAAAGGTTTCAAGCCT
ACTCATCCAACCAAACCTCCAGTTTCAAGATATCCAGGTTATCCTGAGGCCAACGAATATCTAT
CAGTTGAAGACTTTGAAGAATTAGATGTAGGCATCCTTGCTGTGATTGTTCTCACTATCCTTGT
TGGCATCGTGGTACTTTGCACCTGCCTGTACAGATGTCTTAAAAGGGAGAAGAAAGGATTGGAC
TAGTGGCCGAGATTAGATTTAGAACCGTTCACTGTGAAGACTTGGGACGGTTGTATGCACTGGA
AACAGAAGTTTCCATCTGTCTATGCAACTCAGGTAATTATAAAAAGCTACCAATTAATGGATCT
TGCAACCTGAGCCTCTGGTTTAATTTAAGATGGCAACGTTGGAGGACCCTAAACTCACCTCCTT
CTCACATGCACGGAATCTACAGCTACATACAGAGCAGTTCTCTTGGAAAGAAATCTGAAAACTA
ACTGGATGGACTCCTATACATTGGTGGATAAAACACACATCAAGGGGCACCTGGCTGGCTTAGT
CAATGGAGCATCTGACTCTTGACCTTGGGGTCATGACTTCAAGCCCCACATGGGACGTGGAGCC
TGCTTTAAAAAAAAAAAAAAAAAAAACAAAATTCACATCAAAATGGATAGGAGAGACTGGGATA
GTATTTCACCATAAACTCCTCCCCAAATGTGGTAACCCACAGTCAGGCAGGAAACTCACAACTC
TGAGCGGCTTCCTGGGAAGCAAAATATTTGAACCCCACATCTGGCACCCCATCCTTTAAGACCT
GCACCGGAGAGATGGGTCTGCAAAACATCTAGCTTTGAAAGCCAATGGGGTTTATGTCTAGCAG
GCTATATATAGCAAACTGAGAAACAGTTCTTGTAGTGCTCCTGTGGATTGACTTTGGCTAACCC
CCCAGGGTACAATGGAGAGGCAGCTGTCTGAAACGCCTTGTCTTCCAGTGAAAGAGACCTATTT
GCATGTCTTAAAAACTTTGGCGTGAAGGGCAGGCATCTAATGTCATACACACCTAGCAG

hide sequence

RefSeq Acc Id:

XM_022420859 ⟹ XP_022276567

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	6,552,124 - 6,581,316 (+)	NCBI
Dog10K_Boxer_Tasha	7	6,114,431 - 6,144,443 (+)	NCBI

Sequence:

show sequence

GTGGGGGGATTGTGGCGTGGGGTGCCAGTCCTCGGGGAGGAGTCCTCCCGGCCGGCTCGTAGGC
TCCCGCTGGGCACCTGCAAGATGAAGGCGTCCCGCGCACCGCGCACCTGCTGTCCCTGCTGCCC
GGAGAAGCGCTTTTCTTGGCGCTTGGTCGGGATCCTTTTGGTGGCCCCAGTGCTCCTGCTTTCT
CTAAACTGTGATGCCTGTGGTGAACCACCAAAATATGACTCTATGACGCTGAAGAGTATCCTTA
AAAACTATTATGCAGTTGGGGAGAAAATATTTTATAAGTGTAATCCAGGGTACTACATTACGTT
TCCTGTCTCGACTTATTGTGAGAAGAATCACTCATGGTTCCCTATCCCAGAAGGTTGTTCAAAG
AAAGAATGTAATTATCCAAGACTCAAAAATGGTGAATTCATTTTCCCAAATTTCACCTCGGGAT
TTAATGATCAAGTTCACTTTCATTGTGATGAGGGTTATCACTTAGAAGGAGAAGCAATTTTGAC
TTGCAACCTTCAAGGAGATGAGGTGTATTGGAGTGATGAATTCCCACAATGTGAAAAGATTTAC
TGTCAACCACCTGCAAAAATAAAAAATGGAAAACACACCAATAGCCACAGAACTATTTTTGAAT
ATAATGAATTAATTACTTTTAGTTGTAATCGTTTAAAAGGATCAGATCAATATTCCCTTGTTGG
AGAAAGAGAACTTACTTGTATTGAGAAAAACAAGTGGAGTAGTCGCCCTCCTCAGTGTAAAGTG
GTCAAATGTGACTATCCAGTAATTGAACATGGAAGACTGATATCAGGAATCAAAGAAAAATATT
ACTACCAAGCAATGGTTCTACTTGAATGCCTCCCAGGCTTCTATCTTAATGGCAGCAACAGAGT
GTTCTGTGGTGAGAATAGTACTTGGGATCCTAAAATACCAAAATGTATTAAAGGTTTCAAGCCT
ACTCATCCAACCAAACCTCCAGTTTCAAGATATCCAGGTTATCCTGAGGCCAACGAATATCTAT
CAGTTGAAGACTTTGAAGAATTAGATGTAGGCATCCTTGCTGTGATTGTTCTCACTATCCTTGT
TGGCATCGTGGTACTTTGCACCTGCCTGTACAGATGTCTTAAAAGGGAGAAGAAAGGATTGGAC
TAGTGGCCGAGATTAGATTTAGAACCGTTCACTGTGAAGACTTGGGACGGTTGTATGCACTGGA
AACAGAAGTTTCCATCTGTCTATGCAACTCAGCTACCAATTAATGGATCTTGCAACCTGAGCCT
CTGGTTTAATTTAAGATGGCAACGTTGGAGGACCCTAAACTCACCTCCTTCTCACATGCACGGA
ATCTACAGCTACATACAGAGCAGTTCTCTTGGAAAGAAATCTGAAAACTAACTGGATGGACTCC
TATACATTGGTGGATAAAACACACATCAAGGGGCACCTGGCTGGCTTAGTCAATGGAGCATCTG
ACTCTTGACCTTGGGGTCATGACTTCAAGCCCCACATGGGACGTGGAGCCTGCTTTAAAAAAAA
AAAAAAAAAAAACAAAATTCACATCAAAATGGATAGGAGAGACTGGGATAGTATTTCACCATAA
ACTCCTCCCCAAATGTGGTAACCCACAGTCAGGCAGGAAACTCACAACTCTGAGCGGCTTCCTG
GGAAGCAAAATATTTGAACCCCACATCTGGCACCCCATCCTTTAAGACCTGCACCGGAGAGATG
GGTCTGCAAAACATCTAGCTTTGAAAGCCAATGGGGTTTATGTCTAGCAGGCTATATATAGCAA
ACTGAGAAACAGTTCTTGTAGTGCTCCTGTGGATTGACTTTGGCTAACCCCCCAGGGTACAATG
GAGAGGCAGCTGTCTGAAACGCCTTGTCTTCCAGTGAAAGAGACCTATTTGCATGTCTTAAAAA
CTTTGGCGTGAAGGGCAGGCATCTAATGTCATACACACCTAGCAG

hide sequence

RefSeq Acc Id:

XM_022420860 ⟹ XP_022276568

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	7	6,552,397 - 6,581,316 (+)	NCBI
Dog10K_Boxer_Tasha	7	6,115,541 - 6,144,443 (+)	NCBI

Sequence:

show sequence

CAGGGCCCTGGAGCTTTGCGTCCTTGACCTCCTGATCCTGATTTCACTATTGATCTGTTTGCAC
GCACACAAATACAAGCACAGACTGTTTTGCTCACTGTTAGAACCCACACAGTGGCAGTCAAGAC
AAGGATGCTAAGACTGATTGACAATGGCAGACAAAACATACTGCTAGCGAATACATAACCCAAG
AGAAGTGCTCTGGAGGAAAGGAGCTTGATTCTCCGATAGCATTTAACAAGGACTAGTTAAAGGC
AGAGAAAATCTTTCACTAAAACTGGCCAAACTCTTCCTCTGTGGGATTCTGTACTTACTATTCC
CTCAGACTTGCAATATTCTCCTCCCGCCCTTTGTATATAAGGCTCCTTCCTCTCATTCAAGCTC
AATTGAGATGTCACATGTCACCCCCTCTCTGACCACCCTATCTCAGACACACACACTCCAGCTC
AGATCCCTCCCTGATGGGGAGACACTCTTGCCAAACTGCTTGCTCTCCCCACTAGAATGCAGAG
AGCTCTCCGTCTTGTCACACTTGTCATTCAAAATGCCCAGCTTTTTGCTCAGTATCAACAGTCT
TGTATAACTTTTAAGTATCAGAAAATGAAATATAATATTCAGCTGAGGCTTATATAGAGTACCA
GCGAAAGGTTCTTTAAAGACCCAGGTTTAGGGTGGCCTTTCTGTGGTGCCTAAGCTAAGGCGGG
GCAGCTGATGTCAGAAAGGCTCTGTCTCTTACTGTTTATGTAGACTCTGCGGTGCCCACAATAC
TCTCCTCTTGCTTGTTACTGGTGGGTAGGGGCCGGTGGCAATAAAAAGAAAGCAAAAAGAAAAA
GAAAAGTTTTTGAAAAGGATCAAGTTGAGGTTAGCCATGGAGCTAACAATGAAGGAGACCATGA
ATATTGTTTGGAGGAGAGGAAATACAATGAATAGGGTGACAATTGGAAGGTCACAGATACTTAG
GAATGCGGAAAAGGAAGTTGCAGGTTCACAGATGCCTGTGGTGAACCACCAAAATATGACTCTA
TGACGCTGAAGAGTATCCTTAAAAACTATTATGCAGTTGGGGAGAAAATATTTTATAAGTGTAA
TCCAGGGTACTACATTACGTTTCCTGTCTCGACTTATTGTGAGAAGAATCACTCATGGTTCCCT
ATCCCAGAAGGTTGTTCAAAGAAAGAATGTAATTATCCAAGACTCAAAAATGGTGAATTCATTT
TCCCAAATTTCACCTCGGGATTTAATGATCAAGTTCACTTTCATTGTGATGAGGGTTATCACTT
AGAAGGAGAAGCAATTTTGACTTGCAACCTTCAAGGAGATGAGGTGTATTGGAGTGATGAATTC
CCACAATGTGAAAAGATTTACTGTCAACCACCTGCAAAAATAAAAAATGGAAAACACACCAATA
GCCACAGAACTATTTTTGAATATAATGAATTAATTACTTTTAGTTGTAATCGTTTAAAAGGATC
AGATCAATATTCCCTTGTTGGAGAAAGAGAACTTACTTGTATTGAGAAAAACAAGTGGAGTAGT
CGCCCTCCTCAGTGTAAAGTGGTCAAATGTGACTATCCAGTAATTGAACATGGAAGACTGATAT
CAGGAATCAAAGAAAAATATTACTACCAAGCAATGGTTCTACTTGAATGCCTCCCAGGCTTCTA
TCTTAATGGCAGCAACAGAGTGTTCTGTGGTGAGAATAGTACTTGGGATCCTAAAATACCAAAA
TGTATTAAAGGTTTCAAGCCTACTCATCCAACCAAACCTCCAGTTTCAAGATATCCAGGTTATC
CTGAGGCCAACGAATATCTATCAGTTGAAGACTTTGAAGAATTAGATGTAGGCATCCTTGCTGT
GATTGTTCTCACTATCCTTGTTGGCATCGTGGTACTTTGCACCTGCCTGTACAGATGTCTTAAA
AGGGAGAAGAAAGGCTACCAATTAATGGATCTTGCAACCTGAGCCTCTGGTTTAATTTAAGATG
GCAACGTTGGAGGACCCTAAACTCACCTCCTTCTCACATGCACGGAATCTACAGCTACATACAG
AGCAGTTCTCTTGGAAAGAAATCTGAAAACTAACTGGATGGACTCCTATACATTGGTGGATAAA
ACACACATCAAGGGGCACCTGGCTGGCTTAGTCAATGGAGCATCTGACTCTTGACCTTGGGGTC
ATGACTTCAAGCCCCACATGGGACGTGGAGCCTGCTTTAAAAAAAAAAAAAAAAAAAACAAAAT
TCACATCAAAATGGATAGGAGAGACTGGGATAGTATTTCACCATAAACTCCTCCCCAAATGTGG
TAACCCACAGTCAGGCAGGAAACTCACAACTCTGAGCGGCTTCCTGGGAAGCAAAATATTTGAA
CCCCACATCTGGCACCCCATCCTTTAAGACCTGCACCGGAGAGATGGGTCTGCAAAACATCTAG
CTTTGAAAGCCAATGGGGTTTATGTCTAGCAGGCTATATATAGCAAACTGAGAAACAGTTCTTG
TAGTGCTCCTGTGGATTGACTTTGGCTAACCCCCCAGGGTACAATGGAGAGGCAGCTGTCTGAA
ACGCCTTGTCTTCCAGTGAAAGAGACCTATTTGCATGTCTTAAAAACTTTGGCGTGAAGGGCAG
GCATCTAATGTCATACACACCTAGCAG

hide sequence

RefSeq Acc Id:

XM_038480696 ⟹ XP_038336624

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	6,173,438 - 6,203,217 (+)	NCBI

RefSeq Acc Id:

XM_038480697 ⟹ XP_038336625

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	6,173,439 - 6,203,217 (+)	NCBI

RefSeq Acc Id:

XM_038480698 ⟹ XP_038336626

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	6,173,439 - 6,203,217 (+)	NCBI

RefSeq Acc Id:

XM_038480699 ⟹ XP_038336627

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	7	6,174,545 - 6,203,217 (+)	NCBI

RefSeq Acc Id:

XM_038542026 ⟹ XP_038397954

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	6,316,510 - 6,346,562 (+)	NCBI

RefSeq Acc Id:

XM_038542027 ⟹ XP_038397955

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	6,316,511 - 6,346,562 (+)	NCBI

RefSeq Acc Id:

XM_038542028 ⟹ XP_038397956

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	6,316,511 - 6,346,562 (+)	NCBI

RefSeq Acc Id:

XM_038542029 ⟹ XP_038397957

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	7	6,317,621 - 6,346,562 (+)	NCBI

RefSeq Acc Id:

XM_038606174 ⟹ XP_038462102

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	6,275,610 - 6,305,657 (+)	NCBI

RefSeq Acc Id:

XM_038606175 ⟹ XP_038462103

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	6,275,611 - 6,305,657 (+)	NCBI

RefSeq Acc Id:

XM_038606176 ⟹ XP_038462104

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	6,275,611 - 6,305,657 (+)	NCBI

RefSeq Acc Id:

XM_038606177 ⟹ XP_038462105

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	7	6,276,721 - 6,305,657 (+)	NCBI

RefSeq Acc Id:

XM_038670871 ⟹ XP_038526799

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	6,240,211 - 6,268,997 (+)	NCBI

RefSeq Acc Id:

XM_038670872 ⟹ XP_038526800

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	6,240,212 - 6,268,997 (+)	NCBI

RefSeq Acc Id:

XM_038670873 ⟹ XP_038526801

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	6,240,212 - 6,268,997 (+)	NCBI

RefSeq Acc Id:

XM_038670875 ⟹ XP_038526803

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	7	6,241,320 - 6,268,997 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005622373	(Get FASTA)	NCBI Sequence Viewer
	XP_022276566	(Get FASTA)	NCBI Sequence Viewer
	XP_022276567	(Get FASTA)	NCBI Sequence Viewer
	XP_022276568	(Get FASTA)	NCBI Sequence Viewer
	XP_038336624	(Get FASTA)	NCBI Sequence Viewer
	XP_038336625	(Get FASTA)	NCBI Sequence Viewer
	XP_038336626	(Get FASTA)	NCBI Sequence Viewer
	XP_038336627	(Get FASTA)	NCBI Sequence Viewer
	XP_038397954	(Get FASTA)	NCBI Sequence Viewer
	XP_038397955	(Get FASTA)	NCBI Sequence Viewer
	XP_038397956	(Get FASTA)	NCBI Sequence Viewer
	XP_038397957	(Get FASTA)	NCBI Sequence Viewer
	XP_038462102	(Get FASTA)	NCBI Sequence Viewer
	XP_038462103	(Get FASTA)	NCBI Sequence Viewer
	XP_038462104	(Get FASTA)	NCBI Sequence Viewer
	XP_038462105	(Get FASTA)	NCBI Sequence Viewer
	XP_038526799	(Get FASTA)	NCBI Sequence Viewer
	XP_038526800	(Get FASTA)	NCBI Sequence Viewer
	XP_038526801	(Get FASTA)	NCBI Sequence Viewer
	XP_038526803	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021036.5
	ENSCAFP00845003338
	ENSCAFP00845003338.1

RefSeq Acc Id:	XP_005622373 ⟸ XM_005622316
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKASRAPRTCCPCCPEKRFSWRLVGILLVAPVLLLSLNCDACGEPPKYDSMTLKSILKNYYAVG EKIFYKCNPGYYITFPVSTYCEKNHSWFPIPEGCSKKECNYPRLKNGEFIFPNFTSGFNDQVHF HCDEGYHLEGEAILTCNLQGDEVYWSDEFPQCEKIYCQPPAKIKNGKHTNSHRTIFEYNELITF SCNRLKGSDQYSLVGERELTCIEKNKWSSRPPQCKVVKCDYPVIEHGRLISGIKEKYYYQAMVL LECLPGFYLNGSNRVFCGENSTWDPKIPKCIKGFKPTHPTKPPVSRYPGYPEANEYLSVEDFEE LDVGILAVIVLTILVGIVVLCTCLYRCLKREKKGYQLMDLAT hide sequence

RefSeq Acc Id:	XP_022276566 ⟸ XM_022420858
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKASRAPRTCCPCCPEKRFSWRLVGILLVAPVLLLSLNCDACGEPPKYDSMTLKSILKNYYAVG EKIFYKCNPGYYITFPVSTYCEKNHSWFPIPEGCSKKECNYPRLKNGEFIFPNFTSGFNDQVHF HCDEGYHLEGEAILTCNLQGDEVYWSDEFPQCEKIYCQPPAKIKNGKHTNSHRTIFEYNELITF SCNRLKGSDQYSLVGERELTCIEKNKWSSRPPQCKVVKCDYPVIEHGRLISGIKEKYYYQAMVL LECLPGFYLNGSNRVFCGENSTWDPKIPKCIKGFKPTHPTKPPVSRYPGYPEANEYLSVEDFEE LDVGILAVIVLTILVGIVVLCTCLYRCLKREKKGLD hide sequence

RefSeq Acc Id:	XP_022276567 ⟸ XM_022420859
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MKASRAPRTCCPCCPEKRFSWRLVGILLVAPVLLLSLNCDACGEPPKYDSMTLKSILKNYYAVG EKIFYKCNPGYYITFPVSTYCEKNHSWFPIPEGCSKKECNYPRLKNGEFIFPNFTSGFNDQVHF HCDEGYHLEGEAILTCNLQGDEVYWSDEFPQCEKIYCQPPAKIKNGKHTNSHRTIFEYNELITF SCNRLKGSDQYSLVGERELTCIEKNKWSSRPPQCKVVKCDYPVIEHGRLISGIKEKYYYQAMVL LECLPGFYLNGSNRVFCGENSTWDPKIPKCIKGFKPTHPTKPPVSRYPGYPEANEYLSVEDFEE LDVGILAVIVLTILVGIVVLCTCLYRCLKREKKGLD hide sequence

RefSeq Acc Id:	XP_022276568 ⟸ XM_022420860
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTLKSILKNYYAVGEKIFYKCNPGYYITFPVSTYCEKNHSWFPIPEGCSKKECNYPRLKNGEFI FPNFTSGFNDQVHFHCDEGYHLEGEAILTCNLQGDEVYWSDEFPQCEKIYCQPPAKIKNGKHTN SHRTIFEYNELITFSCNRLKGSDQYSLVGERELTCIEKNKWSSRPPQCKVVKCDYPVIEHGRLI SGIKEKYYYQAMVLLECLPGFYLNGSNRVFCGENSTWDPKIPKCIKGFKPTHPTKPPVSRYPGY PEANEYLSVEDFEELDVGILAVIVLTILVGIVVLCTCLYRCLKREKKGYQLMDLAT hide sequence

RefSeq Acc Id:	XP_038336624 ⟸ XM_038480696
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038336625 ⟸ XM_038480697
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038336626 ⟸ XM_038480698
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038336627 ⟸ XM_038480699
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038462102 ⟸ XM_038606174
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038462103 ⟸ XM_038606175
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038462104 ⟸ XM_038606176
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038462105 ⟸ XM_038606177
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038526799 ⟸ XM_038670871
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038526800 ⟸ XM_038670872
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038526801 ⟸ XM_038670873
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038526803 ⟸ XM_038670875
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038397954 ⟸ XM_038542026
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038397955 ⟸ XM_038542027
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038397956 ⟸ XM_038542028
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038397957 ⟸ XM_038542029
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3MFV5 (UniProtKB/TrEMBL), A0A8P0SJ27 (UniProtKB/TrEMBL)

Protein Domains

Sushi

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014256	UniProtKB/TrEMBL
	ENSCAFG00845002365	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000022652.5	UniProtKB/TrEMBL
	ENSCAFT00845004175	ENTREZGENE
	ENSCAFT00845004175.1	UniProtKB/TrEMBL
Gene3D-CATH	Complement Module, domain 1	UniProtKB/TrEMBL
InterPro	CD46	UniProtKB/TrEMBL
	Sushi/SCR/CCP_sf	UniProtKB/TrEMBL
	Sushi_SCR_CCP_dom	UniProtKB/TrEMBL
NCBI Gene	LOC102156626	ENTREZGENE
PANTHER	COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING	UniProtKB/TrEMBL
	MEMBRANE COFACTOR PROTEIN	UniProtKB/TrEMBL
Pfam	Sushi	UniProtKB/TrEMBL
PIRSF	TLX_CD46	UniProtKB/TrEMBL
PROSITE	SUSHI	UniProtKB/TrEMBL
SMART	CCP	UniProtKB/TrEMBL
Superfamily-SCOP	SSF57535	UniProtKB/TrEMBL
UniProt	A0A8I3MFV5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SJ27	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - MGI