OR5AN1 (olfactory receptor family 5 subfamily AN member 1) - Rat Genome Database

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Gene: OR5AN1 (olfactory receptor family 5 subfamily AN member 1) Canis lupus familiaris
Analyze
Symbol: OR5AN1
Name: olfactory receptor family 5 subfamily AN member 1
RGD ID: 12372946
Description: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: LOC609788; olfactory receptor 5AN1-like
RGD Orthologs
Human
Mouse
Rat
Bonobo
Pig
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11837,329,690 - 37,330,628 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1837,329,690 - 37,330,744 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01837,968,258 - 37,969,196 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11837,557,962 - 37,558,900 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01837,135,042 - 37,135,980 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01837,764,171 - 37,765,109 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
OR5AN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11837,329,690 - 37,330,628 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1837,329,690 - 37,330,744 (+)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.01837,968,258 - 37,969,196 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.11837,557,962 - 37,558,900 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01837,135,042 - 37,135,980 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01837,764,171 - 37,765,109 (+)NCBIUU_Cfam_GSD_1.0
OR5AN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381159,358,895 - 59,371,714 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1159,358,895 - 59,371,714 (+)EnsemblGRCh38hg38GRCh38
GRCh371159,126,368 - 59,139,187 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,888,508 - 58,889,443 (+)NCBINCBI36Build 36hg18NCBI36
Build 341158,888,507 - 58,889,443NCBI
Celera1156,493,212 - 56,494,147 (+)NCBICelera
Cytogenetic Map11q12.1NCBI
HuRef1155,479,692 - 55,480,627 (+)NCBIHuRef
CHM1_11158,997,697 - 58,998,632 (+)NCBICHM1_1
T2T-CHM13v2.01159,309,745 - 59,322,565 (+)NCBIT2T-CHM13v2.0
Or5an9
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391912,186,932 - 12,187,870 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1912,177,998 - 12,189,555 (+)EnsemblGRCm39 Ensembl
GRCm381912,209,568 - 12,210,506 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1912,200,634 - 12,212,191 (+)EnsemblGRCm38mm10GRCm38
MGSCv371912,284,058 - 12,284,996 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361912,276,613 - 12,277,551 (+)NCBIMGSCv36mm8
Celera1912,912,320 - 12,913,258 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map198.67NCBI
Or5an1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81218,666,274 - 218,667,212 (+)NCBIGRCr8
mRatBN7.21209,241,571 - 209,242,510 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1209,241,571 - 209,242,510 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1217,616,220 - 217,617,158 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01224,551,263 - 224,552,201 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01217,370,655 - 217,371,593 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01228,628,274 - 228,629,212 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1228,628,274 - 228,629,212 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01235,788,665 - 235,789,603 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41215,177,170 - 215,178,108 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11215,335,599 - 215,336,538 (+)NCBI
Celera1206,667,720 - 206,668,658 (+)NCBICelera
Cytogenetic Map1q43NCBI
LOC100976396
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2960,482,816 - 60,495,648 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11161,525,129 - 61,537,949 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01154,582,598 - 54,583,622 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11158,034,075 - 58,035,099 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1158,034,116 - 58,035,051 (+)Ensemblpanpan1.1panPan2
LOC100516243
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.2211,525,200 - 11,526,138 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC101720079
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248641,378,172 - 1,390,681 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in OR5AN1
21 total Variants

Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000068215   ⟹   ENSCAFP00000060243
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1837,329,690 - 37,330,744 (+)Ensembl
RefSeq Acc Id: NM_001388874   ⟹   NP_001375803
RefSeq Status: INFERRED
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01837,968,258 - 37,969,196 (+)NCBI
UMICH_Zoey_3.11837,557,962 - 37,558,900 (+)NCBI
UNSW_CanFamBas_1.01837,135,042 - 37,135,980 (+)NCBI
UU_Cfam_GSD_1.01837,764,171 - 37,765,109 (+)NCBI
Protein Sequences
Protein RefSeqs NP_001375803 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00030029111.1
  ENSCAFP00040034971.1
  ENSCAFP00040035061.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000060243   ⟸   ENSCAFT00000068215
RefSeq Acc Id: NP_001375803   ⟸   NM_001388874
- UniProtKB: A0A8C0TG70 (UniProtKB/TrEMBL)
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000044533 Ensembl
  ENSCAFG00030018103 UniProtKB/TrEMBL
  ENSCAFG00040021578 UniProtKB/TrEMBL
  ENSCAFG00040021656 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030033361.1 UniProtKB/TrEMBL
  ENSCAFT00040040068.1 UniProtKB/TrEMBL
  ENSCAFT00040040175.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  Olfact_rcpt UniProtKB/TrEMBL
NCBI Gene LOC609788 ENTREZGENE
PANTHER OLFACTORY RECEPTOR UniProtKB/TrEMBL
  OLFACTORY RECEPTOR 5AN1 UniProtKB/TrEMBL
Pfam 7tm_4 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  OLFACTORYR UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0NYL0_CANLF UniProtKB/TrEMBL
  A0A8C0TEN1_CANLF UniProtKB/TrEMBL
  A0A8C0TG70 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:96830 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-02-04 OR5AN1  olfactory receptor family 5 subfamily AN member 1  LOC609788  olfactory receptor 5AN1-like  Symbol and/or name change 5135510 APPROVED