CDK5RAP2 (CDK5 regulatory subunit associated protein 2) - Rat Genome Database

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Gene: CDK5RAP2 (CDK5 regulatory subunit associated protein 2) Canis lupus familiaris
Analyze
Symbol: CDK5RAP2
Name: CDK5 regulatory subunit associated protein 2
RGD ID: 12371873
Description: ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH coloboma (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN gamma-tubulin ring complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: CDK5 regulatory subunit-associated protein 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11173,548,003 - 73,693,044 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1171,961,518 - 72,114,600 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01174,680,442 - 74,834,175 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1174,680,482 - 74,823,995 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11173,193,623 - 73,346,570 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01173,225,707 - 73,378,608 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01173,962,635 - 74,115,691 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:22301074   PMID:27158822   PMID:30032202  


Genomics

Comparative Map Data
CDK5RAP2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11173,548,003 - 73,693,044 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1171,961,518 - 72,114,600 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01174,680,442 - 74,834,175 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1174,680,482 - 74,823,995 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11173,193,623 - 73,346,570 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01173,225,707 - 73,378,608 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01173,962,635 - 74,115,691 (-)NCBIUU_Cfam_GSD_1.0
CDK5RAP2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389120,388,875 - 120,580,167 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9120,388,875 - 120,580,170 (-)EnsemblGRCh38hg38GRCh38
GRCh379123,151,153 - 123,342,445 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 369122,190,968 - 122,382,258 (-)NCBINCBI36Build 36hg18NCBI36
Build 349120,230,701 - 120,421,991NCBI
Celera993,799,407 - 93,990,706 (-)NCBICelera
Cytogenetic Map9q33.2NCBI
HuRef992,769,151 - 92,960,484 (-)NCBIHuRef
CHM1_19123,298,715 - 123,489,623 (-)NCBICHM1_1
T2T-CHM13v2.09132,583,189 - 132,774,493 (-)NCBIT2T-CHM13v2.0
Cdk5rap2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39470,135,092 - 70,328,672 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl470,135,093 - 70,328,680 (-)EnsemblGRCm39 Ensembl
GRCm38470,216,855 - 70,410,435 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl470,216,856 - 70,410,443 (-)EnsemblGRCm38mm10GRCm38
MGSCv37469,884,058 - 70,071,401 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36469,709,385 - 69,896,728 (-)NCBIMGSCv36mm8
Celera468,823,988 - 69,004,683 (-)NCBICelera
Cytogenetic Map4C2NCBI
Cdk5rap2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8588,807,402 - 88,976,005 (-)NCBIGRCr8
mRatBN7.2583,792,282 - 83,961,129 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl583,792,284 - 83,960,782 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx586,182,820 - 86,351,488 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0588,000,151 - 88,168,819 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0587,975,837 - 88,144,496 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0586,387,238 - 86,554,108 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl586,387,078 - 86,554,102 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0590,474,206 - 90,641,334 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4587,564,010 - 87,738,257 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1587,569,157 - 87,585,659 (-)NCBI
Celera582,598,401 - 82,765,611 (-)NCBICelera
Cytogenetic Map5q31NCBI
Cdk5rap2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554197,412,331 - 7,610,353 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554197,412,177 - 7,606,883 (+)NCBIChiLan1.0ChiLan1.0
CDK5RAP2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21118,765,717 - 18,953,897 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1918,768,068 - 18,956,572 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0991,519,179 - 91,707,469 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19119,867,654 - 120,055,608 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9119,868,015 - 120,055,608 (-)Ensemblpanpan1.1panPan2
Cdk5rap2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947189,132,141 - 189,313,032 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364878,900,530 - 9,081,527 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364878,900,375 - 9,081,547 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CDK5RAP2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1260,466,942 - 260,648,161 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11260,465,809 - 260,648,070 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21292,619,819 - 292,719,239 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CDK5RAP2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11218,999,203 - 19,186,801 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1218,999,213 - 19,186,785 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603523,820,723 - 24,007,238 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cdk5rap2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476014,736,104 - 14,930,119 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476014,736,273 - 14,930,168 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CDK5RAP2
3585 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 8
Low 5 5 22 6 6 6 6 6 12 10 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014117959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014117960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014117961 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022425004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491112 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038491113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553239 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553240 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553243 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553245 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038553246 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038617121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038657694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682576 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038682578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000005724   ⟹   ENSCAFP00000005299
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000066955   ⟹   ENSCAFP00000063054
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068990   ⟹   ENSCAFP00000045093
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069500   ⟹   ENSCAFP00000063935
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069725   ⟹   ENSCAFP00000052673
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000074275   ⟹   ENSCAFP00000052049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000076242   ⟹   ENSCAFP00000059911
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000080873   ⟹   ENSCAFP00000043340
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000093243   ⟹   ENSCAFP00000063433
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1173,548,038 - 73,690,199 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025149   ⟹   ENSCAFP00845019779
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,680,482 - 74,823,528 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025335   ⟹   ENSCAFP00845019939
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,680,482 - 74,823,528 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025367   ⟹   ENSCAFP00845019964
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,680,482 - 74,823,243 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025404   ⟹   ENSCAFP00845019996
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,167 - 74,823,243 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025441   ⟹   ENSCAFP00845020029
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,291 - 74,823,528 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025757   ⟹   ENSCAFP00845020294
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,533 - 74,823,528 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845025991   ⟹   ENSCAFP00845020490
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,649 - 74,823,995 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845026045   ⟹   ENSCAFP00845020536
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,649 - 74,823,995 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845026115   ⟹   ENSCAFP00845020590
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1174,683,777 - 74,823,243 (-)Ensembl
RefSeq Acc Id: XM_014117961   ⟹   XP_013973436
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11173,548,003 - 73,676,168 (-)NCBI
Dog10K_Boxer_Tasha1171,961,518 - 72,089,707 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038491105   ⟹   XP_038347033
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491106   ⟹   XP_038347034
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491107   ⟹   XP_038347035
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491108   ⟹   XP_038347036
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491109   ⟹   XP_038347037
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491111   ⟹   XP_038347039
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,570 (-)NCBI
RefSeq Acc Id: XM_038491112   ⟹   XP_038347040
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,346,569 (-)NCBI
RefSeq Acc Id: XM_038491113   ⟹   XP_038347041
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11173,193,623 - 73,321,516 (-)NCBI
RefSeq Acc Id: XM_038553239   ⟹   XP_038409167
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553240   ⟹   XP_038409168
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553241   ⟹   XP_038409169
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553242   ⟹   XP_038409170
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553243   ⟹   XP_038409171
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553244   ⟹   XP_038409172
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,691 (-)NCBI
RefSeq Acc Id: XM_038553245   ⟹   XP_038409173
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,115,690 (-)NCBI
RefSeq Acc Id: XM_038553246   ⟹   XP_038409174
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01173,962,635 - 74,090,786 (-)NCBI
RefSeq Acc Id: XM_038617114   ⟹   XP_038473042
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617115   ⟹   XP_038473043
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617116   ⟹   XP_038473044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617117   ⟹   XP_038473045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617118   ⟹   XP_038473046
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617119   ⟹   XP_038473047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,608 (-)NCBI
RefSeq Acc Id: XM_038617120   ⟹   XP_038473048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,378,607 (-)NCBI
RefSeq Acc Id: XM_038617121   ⟹   XP_038473049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01173,225,707 - 73,353,738 (-)NCBI
RefSeq Acc Id: XM_038657666   ⟹   XP_038513594
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038657676   ⟹   XP_038513604
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038657683   ⟹   XP_038513611
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038657685   ⟹   XP_038513613
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038657686   ⟹   XP_038513614
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038657691   ⟹   XP_038513619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,600 (-)NCBI
RefSeq Acc Id: XM_038657694   ⟹   XP_038513622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1171,961,518 - 72,114,599 (-)NCBI
RefSeq Acc Id: XM_038682571   ⟹   XP_038538499
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682572   ⟹   XP_038538500
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682573   ⟹   XP_038538501
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682574   ⟹   XP_038538502
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682575   ⟹   XP_038538503
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682576   ⟹   XP_038538504
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,175 (-)NCBI
RefSeq Acc Id: XM_038682577   ⟹   XP_038538505
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,834,174 (-)NCBI
RefSeq Acc Id: XM_038682578   ⟹   XP_038538506
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01174,680,442 - 74,809,107 (-)NCBI
Protein Sequences
Protein RefSeqs XP_013973436 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347033 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347034 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347035 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347036 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347037 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347039 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347040 (Get FASTA)   NCBI Sequence Viewer  
  XP_038347041 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409167 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409168 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409169 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409170 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409171 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409172 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409173 (Get FASTA)   NCBI Sequence Viewer  
  XP_038409174 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473042 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473043 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473044 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473045 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473046 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038473049 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513594 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513604 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513611 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513613 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513614 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513619 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513622 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538499 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538500 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538501 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538502 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538503 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538504 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538505 (Get FASTA)   NCBI Sequence Viewer  
  XP_038538506 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000005299.5
  ENSCAFP00000045093.2
  ENSCAFP00000052049.2
  ENSCAFP00000059911.2
  ENSCAFP00000063054.2
  ENSCAFP00000063433.2
  ENSCAFP00000063935.2
  ENSCAFP00040015675.1
  ENSCAFP00040015934.1
  ENSCAFP00040016164.1
  ENSCAFP00040016427.1
  ENSCAFP00040016703.1
  ENSCAFP00845019779.1
  ENSCAFP00845019939.1
  ENSCAFP00845019964
  ENSCAFP00845019964.1
  ENSCAFP00845019996.1
  ENSCAFP00845020029.1
  ENSCAFP00845020294.1
  ENSCAFP00845020490
  ENSCAFP00845020490.1
  ENSCAFP00845020536
  ENSCAFP00845020536.1
  ENSCAFP00845020590.1
Reference Protein Sequences
RefSeq Acc Id: XP_013973436   ⟸   XM_014117961
- Peptide Label: isoform X8
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000045093   ⟸   ENSCAFT00000068990
RefSeq Acc Id: ENSCAFP00000005299   ⟸   ENSCAFT00000005724
RefSeq Acc Id: ENSCAFP00000052049   ⟸   ENSCAFT00000074275
RefSeq Acc Id: ENSCAFP00000063935   ⟸   ENSCAFT00000069500
RefSeq Acc Id: ENSCAFP00000052673   ⟸   ENSCAFT00000069725
RefSeq Acc Id: ENSCAFP00000063433   ⟸   ENSCAFT00000093243
RefSeq Acc Id: ENSCAFP00000063054   ⟸   ENSCAFT00000066955
RefSeq Acc Id: ENSCAFP00000059911   ⟸   ENSCAFT00000076242
RefSeq Acc Id: ENSCAFP00000043340   ⟸   ENSCAFT00000080873
RefSeq Acc Id: XP_038347039   ⟸   XM_038491111
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038347037   ⟸   XM_038491109
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038347035   ⟸   XM_038491107
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038347036   ⟸   XM_038491108
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038347040   ⟸   XM_038491112
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038347034   ⟸   XM_038491106
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038347033   ⟸   XM_038491105
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038347041   ⟸   XM_038491113
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038473047   ⟸   XM_038617119
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038473046   ⟸   XM_038617118
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038473044   ⟸   XM_038617116
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038473045   ⟸   XM_038617117
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038473048   ⟸   XM_038617120
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038473043   ⟸   XM_038617115
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038473042   ⟸   XM_038617114
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038473049   ⟸   XM_038617121
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038538504   ⟸   XM_038682576
- Peptide Label: isoform X6
- UniProtKB: A0A8C0S670 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538503   ⟸   XM_038682575
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538501   ⟸   XM_038682573
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538502   ⟸   XM_038682574
- Peptide Label: isoform X4
- UniProtKB: A0A8C0S556 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538505   ⟸   XM_038682577
- Peptide Label: isoform X7
- UniProtKB: A0A8C0S6R6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538500   ⟸   XM_038682572
- Peptide Label: isoform X2
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538499   ⟸   XM_038682571
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038538506   ⟸   XM_038682578
- Peptide Label: isoform X8
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513619   ⟸   XM_038657691
- Peptide Label: isoform X6
- UniProtKB: A0A8C0S670 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513614   ⟸   XM_038657686
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513611   ⟸   XM_038657683
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513613   ⟸   XM_038657685
- Peptide Label: isoform X4
- UniProtKB: A0A8C0S556 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513622   ⟸   XM_038657694
- Peptide Label: isoform X7
- UniProtKB: A0A8C0S6R6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513604   ⟸   XM_038657676
- Peptide Label: isoform X2
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513594   ⟸   XM_038657666
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409172   ⟸   XM_038553244
- Peptide Label: isoform X6
- UniProtKB: A0A8C0S670 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409171   ⟸   XM_038553243
- Peptide Label: isoform X5
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409169   ⟸   XM_038553241
- Peptide Label: isoform X3
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409170   ⟸   XM_038553242
- Peptide Label: isoform X4
- UniProtKB: A0A8C0S556 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409173   ⟸   XM_038553245
- Peptide Label: isoform X7
- UniProtKB: A0A8C0S6R6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409168   ⟸   XM_038553240
- Peptide Label: isoform X2
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409167   ⟸   XM_038553239
- Peptide Label: isoform X1
- UniProtKB: A0A8C0S441 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038409174   ⟸   XM_038553246
- Peptide Label: isoform X8
- UniProtKB: A0A8C0YU19 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845020029   ⟸   ENSCAFT00845025441
RefSeq Acc Id: ENSCAFP00845019996   ⟸   ENSCAFT00845025404
RefSeq Acc Id: ENSCAFP00845020490   ⟸   ENSCAFT00845025991
RefSeq Acc Id: ENSCAFP00845020590   ⟸   ENSCAFT00845026115
RefSeq Acc Id: ENSCAFP00845019964   ⟸   ENSCAFT00845025367
RefSeq Acc Id: ENSCAFP00845020294   ⟸   ENSCAFT00845025757
RefSeq Acc Id: ENSCAFP00845020536   ⟸   ENSCAFT00845026045
RefSeq Acc Id: ENSCAFP00845019779   ⟸   ENSCAFT00845025149
RefSeq Acc Id: ENSCAFP00845019939   ⟸   ENSCAFT00845025335
Protein Domains
Centrosomin N-terminal motif


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003560 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040009436 UniProtKB/TrEMBL
  ENSCAFG00845013104 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000005724.5 UniProtKB/TrEMBL
  ENSCAFT00000066955.2 UniProtKB/TrEMBL
  ENSCAFT00000068990.2 UniProtKB/TrEMBL
  ENSCAFT00000069500.2 UniProtKB/TrEMBL
  ENSCAFT00000074275.2 UniProtKB/TrEMBL
  ENSCAFT00000076242.2 UniProtKB/TrEMBL
  ENSCAFT00000093243.2 UniProtKB/TrEMBL
  ENSCAFT00040018056.1 UniProtKB/TrEMBL
  ENSCAFT00040018352.1 UniProtKB/TrEMBL
  ENSCAFT00040018631.1 UniProtKB/TrEMBL
  ENSCAFT00040018931.1 UniProtKB/TrEMBL
  ENSCAFT00040019253.1 UniProtKB/TrEMBL
  ENSCAFT00845025149.1 UniProtKB/TrEMBL
  ENSCAFT00845025335.1 UniProtKB/TrEMBL
  ENSCAFT00845025367 ENTREZGENE
  ENSCAFT00845025367.1 UniProtKB/TrEMBL
  ENSCAFT00845025404.1 UniProtKB/TrEMBL
  ENSCAFT00845025441.1 UniProtKB/TrEMBL
  ENSCAFT00845025757.1 UniProtKB/TrEMBL
  ENSCAFT00845025991 ENTREZGENE
  ENSCAFT00845025991.1 UniProtKB/TrEMBL
  ENSCAFT00845026045 ENTREZGENE
  ENSCAFT00845026045.1 UniProtKB/TrEMBL
  ENSCAFT00845026115.1 UniProtKB/TrEMBL
InterPro CDK5RAP2 UniProtKB/TrEMBL
  Cnn_1N UniProtKB/TrEMBL
NCBI Gene CDK5RAP2 ENTREZGENE
PANTHER CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 2 UniProtKB/TrEMBL
  PTHR46930 UniProtKB/TrEMBL
Pfam Cnn_1N UniProtKB/TrEMBL
UniProt A0A8C0S441 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S556 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S670 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S6R6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0YU19 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NIA0_CANLF UniProtKB/TrEMBL
  A0A8I3NIU7_CANLF UniProtKB/TrEMBL
  A0A8I3NK14_CANLF UniProtKB/TrEMBL
  A0A8I3NNR4_CANLF UniProtKB/TrEMBL
  A0A8I3NPY3_CANLF UniProtKB/TrEMBL
  A0A8I3P2K5_CANLF UniProtKB/TrEMBL
  A0A8I3RXX8_CANLF UniProtKB/TrEMBL
  A0A8I3RY74_CANLF UniProtKB/TrEMBL
  A0A8I3S0N1_CANLF UniProtKB/TrEMBL
  A0A8P0N6E7_CANLF UniProtKB/TrEMBL
  A0A8P0NVG8_CANLF UniProtKB/TrEMBL
  A0A8P0P1Q1_CANLF UniProtKB/TrEMBL
  A0A8P0P903_CANLF UniProtKB/TrEMBL
  A0A8P0PBW0_CANLF UniProtKB/TrEMBL
  A0A8P0PCM3_CANLF UniProtKB/TrEMBL
  A0A8P0TEZ4_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:39058 ENTREZGENE