TAT (tyrosine aminotransferase) - Rat Genome Database

Name: TAT
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: TAT (tyrosine aminotransferase) Canis lupus familiaris

Analyze

Symbol:

TAT

Name:

tyrosine aminotransferase

RGD ID:

12367841

Description:

ENCODES a protein that exhibits amino acid binding (ortholog); L-tyrosine:2-oxoglutarate aminotransferase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); response to dexamethasone (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); genetic disease (ortholog); microcephaly (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TAT (tyrosine aminotransferase)	HGNC	HomoloGene, NCBI
Mus musculus (house mouse):	Tat (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tat (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tat (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TAT (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tat (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TAT (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TAT (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tat (tyrosine aminotransferase)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	77,365,589 - 77,378,474 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	77,366,138 - 77,378,419 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	77,327,228 - 77,340,137 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	77,804,675 - 77,817,578 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	77,804,680 - 77,817,500 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	77,624,765 - 77,637,663 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	77,447,892 - 77,460,816 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	77,946,897 - 77,959,805 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autosomal dominant dyskeratosis congenita 6 (ISO)

genetic disease (ISO)

microcephaly (ISO)

tyrosinemia (ISO)

tyrosinemia type II (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

2-oxoglutarate metabolic process (IEA)

amino acid metabolic process (ISO)

aromatic amino acid family catabolic process (IEA)

biosynthetic process (IEA)

glutamate metabolic process (IEA)

L-phenylalanine catabolic process (IEA)

response to dexamethasone (ISO)

response to glucocorticoid (ISO)

response to mercury ion (ISO)

response to organic cyclic compound (ISO)

response to oxidative stress (ISO)

tyrosine catabolic process (IEA)

Molecular Function

amino acid binding (ISO)

identical protein binding (IEA)

L-tyrosine:2-oxoglutarate aminotransferase activity (IEA,ISO)

protein binding (ISO)

pyridoxal phosphate binding (IEA)

transaminase activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

alkaptonuria pathway (ISO)

disulfiram pharmacodynamics pathway (ISO)

dopamine beta-hydroxylase deficiency pathway (ISO)

forkhead class A signaling pathway (ISO)

hawkinsinuria pathway (ISO)

phenylketonuria pathway (ISO)

tyrosine metabolic pathway (ISO)

tyrosinemia type I pathway (ISO)

tyrosinemia type II pathway (ISO)

tyrosinemia type III pathway (ISO)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TAT
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	77,365,589 - 77,378,474 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	77,366,138 - 77,378,419 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	77,327,228 - 77,340,137 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	77,804,675 - 77,817,578 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	77,804,680 - 77,817,500 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	77,624,765 - 77,637,663 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	77,447,892 - 77,460,816 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	77,946,897 - 77,959,805 (-)	NCBI		UU_Cfam_GSD_1.0

TAT
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	71,565,660 - 71,577,092 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	71,565,660 - 71,577,092 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	71,599,563 - 71,610,995 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	70,158,255 - 70,168,496 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	70,158,254 - 70,168,496	NCBI
Celera	16	55,916,606 - 55,926,850 (-)	NCBI		Celera
Cytogenetic Map	16	q22.2	NCBI
HuRef	16	57,368,735 - 57,378,980 (-)	NCBI		HuRef
CHM1_1	16	73,013,576 - 73,023,820 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	77,382,852 - 77,394,286 (-)	NCBI		T2T-CHM13v2.0

Tat
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	110,712,710 - 110,726,436 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	110,717,069 - 110,726,435 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	109,986,078 - 109,999,804 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	109,990,437 - 109,999,803 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	112,514,336 - 112,523,704 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	112,879,586 - 112,888,930 (+)	NCBI		MGSCv36	mm8
Celera	8	114,212,364 - 114,221,732 (+)	NCBI		Celera
Cytogenetic Map	8	D3	NCBI
cM Map	8	57.38	NCBI

Tat
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	54,856,604 - 54,867,168 (+)	NCBI		GRCr8
mRatBN7.2	19	37,947,153 - 37,957,717 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	37,947,112 - 37,958,031 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	44,759,466 - 44,770,043 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	45,412,802 - 45,423,379 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	47,722,404 - 47,732,988 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	41,675,639 - 41,686,195 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	41,675,355 - 41,686,229 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	52,499,259 - 52,509,759 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	39,854,163 - 39,865,060 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	39,859,002 - 39,870,255 (+)	NCBI
Celera	19	37,350,682 - 37,361,246 (+)	NCBI		Celera
RH 3.4 Map	19	448.1	RGD
Cytogenetic Map	19	q12	NCBI

Tat
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955484	4,276,953 - 4,287,627 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955484	4,278,083 - 4,287,535 (-)	NCBI	ChiLan1.0	ChiLan1.0

TAT
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	82,583,247 - 82,594,018 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	88,514,074 - 88,524,846 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	53,434,028 - 53,443,624 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	71,402,560 - 71,414,013 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	71,404,399 - 71,413,886 (-)	Ensembl	panpan1.1		panPan2

Tat
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	37,389,275 - 37,399,429 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936475	22,189,728 - 22,199,672 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936475	22,190,282 - 22,199,398 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TAT
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	14,570,589 - 14,583,177 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	14,571,311 - 14,583,203 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	14,064,566 - 14,076,459 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TAT
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	54,695,342 - 54,749,291 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	54,693,458 - 54,705,082 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	17,503,474 - 17,512,808 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tat
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	13,790,440 - 13,803,202 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	13,793,593 - 13,803,227 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TAT
179 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High			1	1		1
Medium			5	5		5
Low	1		13				2		6		5
Below cutoff	4	3	3		4		4	2	6	8	5	6

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038477223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602545	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038667152	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_536796	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000066	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	L47165	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000032147 ⟹ ENSCAFP00000032798

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	77,366,138 - 77,378,419 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845009999 ⟹ ENSCAFP00845007803

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	77,804,680 - 77,817,500 (-)	Ensembl

RefSeq Acc Id:

XM_038477223 ⟹ XP_038333151

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	77,624,765 - 77,637,663 (-)	NCBI

RefSeq Acc Id:

XM_038538424 ⟹ XP_038394352

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	77,946,897 - 77,959,805 (-)	NCBI

RefSeq Acc Id:

XM_038602545 ⟹ XP_038458473

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	77,447,892 - 77,460,816 (-)	NCBI

RefSeq Acc Id:

XM_038667152 ⟹ XP_038523080

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	77,804,675 - 77,817,578 (-)	NCBI

RefSeq Acc Id:

XM_536796 ⟹ XP_536796

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	77,365,589 - 77,378,474 (-)	NCBI
Dog10K_Boxer_Tasha	5	77,327,228 - 77,340,137 (-)	NCBI

Sequence:

show sequence

GCAGACTATTTCAGGAGTCAAGAATTGCATCTGAGGCCATTGTCGCTGTGACCTGGTAGAGAAG
AATCAAGAGAGCTTCCAGGTTTGTCTACTTGGAGGCTGTTTGTCCTTCAGTTAGAAGGCTTCGC
TCGTGATGGACCCATATGTGATTGAGATGAACAGCAACAGCAACCTCCCCTCAGTCCTGGATGT
GCATGTCAATATTGGTGGGAGAAGCTCCTTGCCAGGAAAAATGAAAGGCAGGAAGGCCAGATGG
TCTGTGAGGCCTTCAGACATGTCTAACAAAACTTTCAACCCCATCCGGGCCATCGTGGACAGCT
CGAAGGTGAAGCCAAATCCAAATAAAGCCACAATTGCTCTGTCTATTGGCGACCCTACTGTGTT
CGGAAACCTGCCTACAGACCCTGAAGTTACACAGGCAATGAAAGATGCCCTGGACTCGGGGAAG
TATAACGGCTATGCCCCCTCCATTGGCTACTTATCCAGTCGGGAGGAGATTGCTTCGTATTACC
ACCGGCCCGAGGCACCCCTGGAAGCTAAGGATGTCATTCTGACCAGTGGCTGCAGTCAGGCTAT
TGAACTTTGTTTAGCTGTATTGGCTAATCCAGGACAAAACATCCTAGTTCCGAGACCTGGTTTC
TCTCTCTACAGGACTTTGGCTGAATCGATGGGAATTGAGGTCAAACTCTACAATTTATTGCCAG
AGAAGTCTTGGGAAATTGACTTGAAACAACTGGAATCTCTGATTGATGAAAAGACAGCTTGTCT
CATTGTTAATAATCCATCAAACCCCTGTGGGTCAGTGTTCAGTAAAAGTCATCTCCAGAAAATT
CTGGCTGTGGCTGCAAGGCAGTGCGTCCCCATCTTAGCTGATGAGATCTATGGAGACATGGTGT
TTTCGGATTCCAAATTTGAGCCTCTGGCTACCCTGAGCAGCAACGTCCCCATCCTGTCCTGTGG
AGGGCTGGCCAAGCGCTGGTTGGTTCCTGGCTGGAGGTTGGGCTGGATCCTCATCCATGACCGA
AGAGACATTTTTGGCAATGAGATCCGAGATGGGCTGGTGAAGCTGAGTCAGAGGATCCTGGGGC
CCTGCACCATCGTCCAGGGAGCTCTGAAAAGCATCCTGCGTCGCACCCCTCAGGAGTTCTACCA
AAATACTCTGAGCTTCCTGAAGTCCAATGCTGATCTTTGCTATGGAGCTTTGGCTGCCATTCCT
GGACTCCGGCCAGTCCGCCCTTCCGGGGCCATGTACCTCATGGTTGGAATTGAGATGGAACATT
TCCCAGAATTTGAGAATGATGTGGAGTTCACAGAGCGGTTAGTTGCTGAACAATCAGTCCACTG
CCTCCCAGCCACGTGCTTCGAGTACCCGAATTTCTTCCGAGTGGTAATCACAGTCCCCAAAGTG
ATGATGCTGGAGGCCTGTAGCCGGATCCAGGAGTTCTGCGAGCTGCACTACCATTGTGCTGAAG
GGAGCCAGGAGGAGTGTGACAAATAGGCCCAAGTCCATTCTCTTGAGTAGGTGCCCCATCTGGG
GAGGGCTGGACTAGGCCTTGCTCTTGTTCCTTAAGAGGAATCAGGCACCCCTACTGGGAGAGGG
GCCTCGAAAGCACATCAGGGGTTCAGAATGGCTCGTGCTTTCCCCTAGCTATGTCCACATACAC
ACTCTGAATCCCAGATTCTCCTCTCACTCTGCTCTGGAGTGACTCACTCATTCCTGAATATGTC
CCCTCCTATATGACTTCCTCCTTTTCTCCTGAGAGTACGAGGTGAGCAAAATTTACTAGAAAGT
GGAAGAGACAAGAAAAGTTAAAGCTCATGATGAGAGAAAAAAAGAGATTGAGAAAATTTGTGTC
CCCAAACATTTCCTCATATTATATCAGTAAGAACACACTCTCCAGTCAGGTCTAAGGCCCAATT
CTGTTACTGCTTCACTTCAGGTATATACCTCGCTTTATGCAATAGAACTATAACGAAAGACGTT
GGGAACACATATATTTGGTTAATTGGATTTTAAACACATTAGCAAAATTTCCTGATTTGACGGA
TCCCTTACAGAAACCTTCTCATTGATTTTTTTTGAAGAATGATTGATTACATGGGGCACCTGGC
TGGCTCAGTCCATACATGTGACTCGTGATCTTGGGGTCATGAGTTTGACCCCTTTGGGTGCAGA
GATTACATACACACATACATACATAAATAGAATTATTGATTGTAAAGGTAATCAATGGACTTTC
TAAATTTAGATATGTGTACATCAGGATTACTTAAAATGAGGGCACATCTATACTTAAAAAAAAA
AAGGAGGAATCATAGGACCTTCCAGAAATACTGTGGTATAAGGTCCAGAAATATCCTATCATTT
TTATGGAATCATTGCTTTTGCTGTAATGTTGATATTGATTTATTGATATATATATTATATTATC
TTTTCATATGTTTTCTAAGAAACATTTATATTGACAAGATCCTTTATTTTGCCAAGGGCATAAA
TTATTGTTTTTCTTCTTTTTTTAAAAAAAATAAATTTTACTAAGTATGCTC

hide sequence

Protein Sequences


Protein RefSeqs	XP_038333151	(Get FASTA)	NCBI Sequence Viewer
	XP_038394352	(Get FASTA)	NCBI Sequence Viewer
	XP_038458473	(Get FASTA)	NCBI Sequence Viewer
	XP_038523080	(Get FASTA)	NCBI Sequence Viewer
	XP_536796	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAA91197	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000032798.3
	ENSCAFP00030014756.1
	ENSCAFP00040028646.1
	ENSCAFP00845007803
	ENSCAFP00845007803.1

RefSeq Acc Id:

XP_536796 ⟸ XM_536796

- UniProtKB:

A0A8C0T2T1 (UniProtKB/TrEMBL), A0A8C0L816 (UniProtKB/TrEMBL), A0A8I3MYF6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MDPYVIEMNSNSNLPSVLDVHVNIGGRSSLPGKMKGRKARWSVRPSDMSNKTFNPIRAIVDSSK
VKPNPNKATIALSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEIASYYHR
PEAPLEAKDVILTSGCSQAIELCLAVLANPGQNILVPRPGFSLYRTLAESMGIEVKLYNLLPEK
SWEIDLKQLESLIDEKTACLIVNNPSNPCGSVFSKSHLQKILAVAARQCVPILADEIYGDMVFS
DSKFEPLATLSSNVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQRILGPC
TIVQGALKSILRRTPQEFYQNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFP
EFENDVEFTERLVAEQSVHCLPATCFEYPNFFRVVITVPKVMMLEACSRIQEFCELHYHCAEGS
QEECDK

hide sequence

RefSeq Acc Id:

ENSCAFP00000032798 ⟸ ENSCAFT00000032147

RefSeq Acc Id:

XP_038333151 ⟸ XM_038477223

RefSeq Acc Id:

XP_038458473 ⟸ XM_038602545

RefSeq Acc Id:	XP_038523080 ⟸ XM_038667152
- UniProtKB:	A0A8C0T2T1 (UniProtKB/TrEMBL), A0A8C0L816 (UniProtKB/TrEMBL), A0A8I3MYF6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038394352 ⟸ XM_038538424
- UniProtKB:	A0A8C0L816 (UniProtKB/TrEMBL), A0A8C0T2T1 (UniProtKB/TrEMBL), A0A8I3MYF6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845007803 ⟸ ENSCAFT00845009999

Protein Domains

Aminotransferase class I/classII

Promoters

RGD ID:

13683441

Promoter ID:

EPDNEW_C1511

Type:

multiple initiation site

Name:

TAT_1

Description:

tyrosine aminotransferase

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	77,378,436 - 77,378,496	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000020188	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030009130	UniProtKB/TrEMBL
	ENSCAFG00040017833	UniProtKB/TrEMBL
	ENSCAFG00845005635	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000032147.5	UniProtKB/TrEMBL
	ENSCAFT00030016884.1	UniProtKB/TrEMBL
	ENSCAFT00040032923.1	UniProtKB/TrEMBL
	ENSCAFT00845009999	ENTREZGENE
	ENSCAFT00845009999.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.640.10	UniProtKB/TrEMBL
	3.90.1150.10	UniProtKB/TrEMBL
InterPro	Aminotransferase_I/II	UniProtKB/TrEMBL
	NHTrfase_class1_PyrdxlP-BS	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_major	UniProtKB/TrEMBL
	PyrdxlP-dep_Trfase_small	UniProtKB/TrEMBL
	Tyr_aminoTrfase_ubiquitination	UniProtKB/TrEMBL
	TyrNic_aminoTrfase	UniProtKB/TrEMBL
	Tyrosine_aminoTrfase	UniProtKB/TrEMBL
KEGG Report	cfa:479665	UniProtKB/TrEMBL
NCBI Gene	TAT	ENTREZGENE
PANTHER	TYROSINE AMINOTRANSFERASE	UniProtKB/TrEMBL
	TYROSINE AMINOTRANSFERASE	UniProtKB/TrEMBL
Pfam	Aminotran_1_2	UniProtKB/TrEMBL
	TAT_ubiq	UniProtKB/TrEMBL
PIRSF	Tyr_transaminase	UniProtKB/TrEMBL
PROSITE	AA_TRANSFER_CLASS_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53383	UniProtKB/TrEMBL
UniProt	A0A8C0L816	ENTREZGENE
	A0A8C0T2T1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MYF6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:53455	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - PID (archival)

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Imported Annotations - SMPDB

Imported Annotations - PID (archival)