ECM1 (extracellular matrix protein 1)

Gene: ECM1 (extracellular matrix protein 1) Canis lupus familiaris

Analyze

Symbol:

ECM1

Name:

extracellular matrix protein 1

RGD ID:

12364310

Description:

ENCODES a protein that exhibits interleukin-2 receptor binding (inferred); protease binding (inferred); INVOLVED IN chondrocyte development (ortholog); endochondral bone growth (ortholog); inflammatory response (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN collagen-containing extracellular matrix (inferred); extracellular region (inferred); extracellular space (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Genes

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	59,696,125 - 59,701,990 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	59,696,477 - 59,701,744 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,142,307 - 59,148,147 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	60,711,672 - 60,717,511 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	60,697,493 - 60,717,511 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,542,109 - 59,547,950 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	59,625,886 - 59,631,725 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,353,552 - 60,359,392 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

gastrointestinal stromal tumor (ISO)

genetic disease (ISO)

hepatocellular carcinoma (ISO)

immunodeficiency 42 (ISO)

lipoid proteinosis (ISO)

MHC class II deficiency (ISO)

parathyroid carcinoma (ISO)

severe congenital neutropenia 3 (ISO)

severe congenital neutropenia 5 (ISO)

Spontaneous Abortions (ISO)

Stomach Neoplasms (ISO)

ulcerative colitis (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

chondrocyte development (IEA,ISO)

endochondral bone growth (IEA,ISO)

inflammatory response (IEA,ISO)

negative regulation of bone mineralization (IEA)

negative regulation of cytokine-mediated signaling pathway (IEA,ISO)

positive regulation of angiogenesis (IEA)

positive regulation of canonical NF-kappaB signal transduction (ISO)

positive regulation of endothelial cell proliferation (IEA)

regulation of bone mineralization (IEA,ISO)

regulation of T cell migration (IEA,ISO)

regulation of transcription by RNA polymerase II (IEA,ISO)

regulation of type 2 immune response (IEA,ISO)

signal transduction (IEA)

Cellular Component

collagen-containing extracellular matrix (IEA)

extracellular region (IEA)

extracellular space (IEA)

Molecular Function

interleukin-2 receptor binding (IEA)

protease binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

ECM1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	17	59,696,125 - 59,701,990 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	17	59,696,477 - 59,701,744 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	17	59,142,307 - 59,148,147 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	17	60,711,672 - 60,717,511 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	17	60,697,493 - 60,717,511 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	17	59,542,109 - 59,547,950 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	17	59,625,886 - 59,631,725 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	17	60,353,552 - 60,359,392 (+)	NCBI		UU_Cfam_GSD_1.0

ECM1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	150,508,109 - 150,513,789 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	150,508,062 - 150,513,789 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	150,480,585 - 150,486,265 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	148,747,207 - 148,752,660 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	123,596,250 - 123,602,028 (+)	NCBI		Celera
Cytogenetic Map	1	q21.2	NCBI
HuRef	1	121,858,654 - 121,864,432 (+)	NCBI		HuRef
CHM1_1	1	151,876,297 - 151,882,073 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	149,632,949 - 149,638,627 (+)	NCBI		T2T-CHM13v2.0

Ecm1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	3	95,641,459 - 95,646,880 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	3	95,641,459 - 95,646,881 (-)	Ensembl		GRCm39 Ensembl
GRCm38	3	95,734,147 - 95,739,876 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	3	95,734,147 - 95,739,569 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	3	95,538,071 - 95,543,492 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	3	95,819,554 - 95,824,967 (-)	NCBI		MGSCv36	mm8
Celera	3	97,167,107 - 97,172,528 (-)	NCBI		Celera
Cytogenetic Map	3	F2.1	NCBI
cM Map	3	40.91	NCBI

Ecm1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	2	185,976,439 - 185,981,656 (-)	NCBI		GRCr8
mRatBN7.2	2	183,287,491 - 183,292,729 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	2	183,287,322 - 183,292,671 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	2	190,952,324 - 190,957,491 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	2	188,747,934 - 188,753,625 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	2	183,584,856 - 183,590,023 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	2	197,855,468 - 197,860,973 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	2	197,855,460 - 197,860,699 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	2	217,345,268 - 217,350,509 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	2	190,525,156 - 190,530,323 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	2	190,489,759 - 190,489,956 (-)	NCBI
Celera	2	175,817,503 - 175,822,670 (-)	NCBI		Celera
Cytogenetic Map	2	q34	NCBI

Ecm1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955413	290,363 - 299,130 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955413	293,295 - 299,293 (-)	NCBI	ChiLan1.0	ChiLan1.0

ECM1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	99,324,741 - 99,330,326 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	99,069,972 - 99,084,160 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	125,853,337 - 125,858,904 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	129,502,041 - 129,507,819 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	129,502,041 - 129,507,819 (+)	Ensembl	panpan1.1		panPan2

Ecm1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	21,720,545 - 21,726,229 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936580	750,736 - 756,771 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936580	750,423 - 756,765 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ECM1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	4	98,615,778 - 98,621,836 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	4	98,615,776 - 98,633,081 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	4	107,904,906 - 107,909,543 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ECM1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Vero_WHO_p1.0	NW_023666038	12,777,257 - 12,783,212 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ecm1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624772	18,233,727 - 18,240,601 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624772	18,234,537 - 18,239,896 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in ECM1
59 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	4	2	6		3		6		6		10	6
Low	1	3	16	6	3	6		6	6
Below cutoff										8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038423067	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038499564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038562134	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038626231	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_845921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000209	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000035	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000359	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000017	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000019091 ⟹ ENSCAFP00000017697

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,696,477 - 59,701,744 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00000092186 ⟹ ENSCAFP00000050127

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	17	59,696,477 - 59,701,744 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845032050 ⟹ ENSCAFP00845025059

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,697,493 - 60,717,265 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845032213 ⟹ ENSCAFP00845025182

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,711,968 - 60,717,511 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845032275 ⟹ ENSCAFP00845025230

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,711,968 - 60,717,511 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845032349 ⟹ ENSCAFP00845025288

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	17	60,711,970 - 60,717,350 (+)	Ensembl

RefSeq Acc Id:

XM_038423067 ⟹ XP_038278995

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	17	60,711,672 - 60,717,511 (+)	NCBI

RefSeq Acc Id:

XM_038499564 ⟹ XP_038355492

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	17	59,542,109 - 59,547,950 (+)	NCBI

RefSeq Acc Id:

XM_038562134 ⟹ XP_038418062

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	17	60,353,552 - 60,359,392 (+)	NCBI

RefSeq Acc Id:

XM_038626231 ⟹ XP_038482159

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	17	59,625,886 - 59,631,725 (+)	NCBI

RefSeq Acc Id:

XM_845921 ⟹ XP_851014

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	17	59,696,125 - 59,701,990 (+)	NCBI
Dog10K_Boxer_Tasha	17	59,142,307 - 59,148,147 (+)	NCBI

Sequence:

show sequence

CTCTGAGCTCAATCCCAGCATGCTGAAATCCTGACCTGAGCCAAAGGCAGACAGACACCTAACC
AACTGAGCCACCCAGGTGCCCCATGTCTCACCATCTCTTACTCCATGAGTTTCAGAATCCATTT
CTCTGGGGATCAGAAGAATGCTCTCCTCCCCTCAGCTCTGTTCTCCTCAGTCCTCTTAGGAGGC
TGCAGGGTGAATTTGGGAGGAGTGGCTGCCAGAGGAGGAGCAGCTGGGACTGAGTCATGGCAGG
AAATAGGAGGGAGGGAGTTATCCCCAGATAGCCGTATAAAAGGAGAAGGAACCAGCCCTAAGGT
TCACAACAGCCGTAACAGCAACTGGAGAAGCAGGCTCCCAGCAGCCCAGCCCTTCAAATCCAGA
TCTACCTGAGACGACCCACCTCCTGGGTGCCACTGGCCAGTCTTTGCCCCAGGATGGGGACCAT
GTCCGGAGCAGCCTTGGTCTTGGCCTGTCTGGCTGTTACTTCTGTAGCCTCTGCAGGAGGCTCC
AAGGCTCCAGGGAAGAGGGAGATGGGGCCTGAGCCCCTTGCCTATCACATTCAAGAAGTTGGCT
ATGCAGCACCCCCCTCCCCACCCCGGACCCAAGCCCTCTCCTTGGATCACCCTGCCACCCCTCA
GCATGACTTTCACTCTGTGGGACAGAGTGAAGTGCAGCCCCTTCCCTCTCTAGAAGCTGTCCGT
GCTCCAGAGGAGGAGCTGCCCCCTCGCCAGCTCCCTGTGGAAAAGAAAGTGGATCCCCCTCTCC
CTCAGGAAGCCATCCCCCAAGAAGAGCTGCCCCGTCCCCAGGTCCCTGTTGAACAGGAGGAAAA
AAAGCCAGCTCCTCCCATGGACTGGAGCTCTCCTGAGCCTGAGTCTTGGAATCCAGCCCAACAC
TGCCAACAGGGCCGACCCCGAGGGGGCTGGGGCCACCGGCTGGATGGCTTCCCCCCTGGGCAGC
CATCTCCAGACAACGTGGACCAGATCTGCCTTCCTAATCGTCAGCGTGTGGTATATGGCCCCTG
GAACCTGCCACAGTCTGGCTTCTCCCACCTTACTCGCCAGGGTGAAACCCTCAATTTGCTGGAG
ACTAGATATTCCCGCTGCTGCCGCTGTCACAGCCACACAAACCGCTTGGACTGTGCAAAACTCG
TGTGGGAGGACGCAATGACCCGATTCTGTGAGGCCGAGTTCTCGGTCAAGACCCGACCCCACCG
GTGCTGCAAACAGCAGGGGGAGGCTCGATTCTCCTGCTTCCAGGAGGAAGCCCCCCGGCCACAC
TACCAGCTCCGGGCCTGCCCCAGCCACCAGCCTGGTATTTCCTCGGGCCCTGAGCTGCCTTTCC
CCCCGGGGGTACCCACACTGGACAACATCAAGAACATCTGCCACCTAAGACGCTTCCGTTCTGT
GCCACGCAACCTCCCAGCTACTGACCCCATCCAAAGACAGCTGCAGACATTGATCCAGCTAGAG
GGGGAGTTTCAGCGCTGCTGTCGGCAGGGAAACAACCACACCTGTACATGGAAGGCTTGGGAGG
AAGCCCTTGATGGATACTGTGAACGGGAACAGGCTATAAAGACCCACCACCACTCCTGTTGCCA
CCACCCTCCTAGCCCTGCCCGCGATGAGTGCTTTGCCCGTCAGGCGCCATACCCCAACTATGAC
CGGGACATCCTGACCCTTGATTTCAGCCAAGTTACCCCCAACCTCATGCAACATCTCTGTGGAA
ATGGAAGACTTCTCACCAAGCATAAACAGATTCCTGGGCTGATCCGGAACATGACTGCCCACTG
CTGTGACCTGCCATTTCCAGAGCAGGCCTGCTGTGCTGAGGAGGAGAAATCGGCCTTCATTGCA
GACTTGTGTGGTTCCCGACGTAACTTCTGGCGAGACTCTGCCCTCTGCTGTAACCTGAATCCTG
GAGATGAACAGACCAACTGCTTCAACACTTATTATCTGAGGAATGTGGCTCTAGTGGCTGGAGA
CAATGGGGATGCCAAGGGTCAGGGGGAGAAGGGCNCAACTCGGGGAAGAAATATCAGCCCCACC
CCTGAGCCCAAAGAAGAATGAGTCACCCCAGAGCCTTGGAGGATCAGATTGGGGGAACCCCACC
CTCCTTGAACACTCATTACAGTAAACACCTCTTGGATTTGGCATCCTCATTGTCTTTAACATCT
CACATACAAACACACCCTCCTAAGCCTGCTTGGATTTTCTTCAGTGACTGGCCCCTGAGGCCCA
CTGCCCTGCCCCTACTGACTGAGCAGAACCATTCCATAGGCTATGATGGTACCATAACTAAACG
GCTTAACTTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038278995	(Get FASTA)	NCBI Sequence Viewer
	XP_038355492	(Get FASTA)	NCBI Sequence Viewer
	XP_038418062	(Get FASTA)	NCBI Sequence Viewer
	XP_038482159	(Get FASTA)	NCBI Sequence Viewer
	XP_851014	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000017625.4
	ENSCAFP00000017697.5
	ENSCAFP00000050088.2
	ENSCAFP00000050127.2
	ENSCAFP00845025059.1
	ENSCAFP00845025182.1
	ENSCAFP00845025230.1
	ENSCAFP00845025288
	ENSCAFP00845025288.1

RefSeq Acc Id:

XP_851014 ⟸ XM_845921

- UniProtKB:

A0A8P0NZY6 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGTMSGAALVLACLAVTSVASAGGSKAPGKREMGPEPLAYHIQEVGYAAPPSPPRTQALSLDHP
ATPQHDFHSVGQSEVQPLPSLEAVRAPEEELPPRQLPVEKKVDPPLPQEAIPQEELPRPQVPVE
QEEKKPAPPMDWSSPEPESWNPAQHCQQGRPRGGWGHRLDGFPPGQPSPDNVDQICLPNRQRVV
YGPWNLPQSGFSHLTRQGETLNLLETRYSRCCRCHSHTNRLDCAKLVWEDAMTRFCEAEFSVKT
RPHRCCKQQGEARFSCFQEEAPRPHYQLRACPSHQPGISSGPELPFPPGVPTLDNIKNICHLRR
FRSVPRNLPATDPIQRQLQTLIQLEGEFQRCCRQGNNHTCTWKAWEEALDGYCEREQAIKTHHH
SCCHHPPSPARDECFARQAPYPNYDRDILTLDFSQVTPNLMQHLCGNGRLLTKHKQIPGLIRNM
TAHCCDLPFPEQACCAEEEKSAFIADLCGSRRNFWRDSALCCNLNPGDEQTNCFNTYYLRNVAL
VAGDNGDAKGQGEKGXTRGRNISPTPEPKEE

hide sequence

RefSeq Acc Id:

ENSCAFP00000017697 ⟸ ENSCAFT00000019091

RefSeq Acc Id:

ENSCAFP00000050127 ⟸ ENSCAFT00000092186

RefSeq Acc Id:

XP_038355492 ⟸ XM_038499564

RefSeq Acc Id:

XP_038482159 ⟸ XM_038626231

RefSeq Acc Id:	XP_038278995 ⟸ XM_038423067
- UniProtKB:	A0A8P0NZY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038418062 ⟸ XM_038562134
- UniProtKB:	A0A8P0NZY6 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845025059 ⟸ ENSCAFT00845032050

RefSeq Acc Id:

ENSCAFP00845025182 ⟸ ENSCAFT00845032213

RefSeq Acc Id:

ENSCAFP00845025230 ⟸ ENSCAFT00845032275

RefSeq Acc Id:

ENSCAFP00845025288 ⟸ ENSCAFT00845032349

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012022	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00845018089	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000019016.5	UniProtKB/TrEMBL
	ENSCAFT00000019091.5	UniProtKB/TrEMBL
	ENSCAFT00000082505.2	UniProtKB/TrEMBL
	ENSCAFT00000092186.2	UniProtKB/TrEMBL
	ENSCAFT00845032050.1	UniProtKB/TrEMBL
	ENSCAFT00845032213.1	UniProtKB/TrEMBL
	ENSCAFT00845032275.1	UniProtKB/TrEMBL
	ENSCAFT00845032349	ENTREZGENE
	ENSCAFT00845032349.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.246.10	UniProtKB/TrEMBL
InterPro	ECM1	UniProtKB/TrEMBL
	Serum_albumin-like	UniProtKB/TrEMBL
NCBI Gene	ECM1	ENTREZGENE
PANTHER	EXTRACELLULAR MATRIX PROTEIN 1	UniProtKB/TrEMBL
	PTHR16776	UniProtKB/TrEMBL
Pfam	ECM1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48552	UniProtKB/TrEMBL
UniProt	A0A8I3P2D9_CANLF	UniProtKB/TrEMBL
	A0A8I3P5P0_CANLF	UniProtKB/TrEMBL
	A0A8I3P5S8_CANLF	UniProtKB/TrEMBL
	A0A8I3P695_CANLF	UniProtKB/TrEMBL
	A0A8P0NDR8_CANLF	UniProtKB/TrEMBL
	A0A8P0NZY6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SGU8_CANLF	UniProtKB/TrEMBL
	A0A8P0T2U7_CANLF	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM