OCSTAMP (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 33,796,582 - 33,802,385 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 33,796,027 - 33,802,270 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 33,256,850 - 33,263,138 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 34,505,222 - 34,511,487 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 34,505,960 - 34,509,115 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 33,762,334 - 33,766,264 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 33,879,039 - 33,885,338 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 34,417,948 - 34,424,217 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
OCSTAMP (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 46,540,946 - 46,550,654 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 46,540,946 - 46,550,654 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 45,169,585 - 45,179,293 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 44,603,075 - 44,612,620 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 20 | 41,880,995 - 41,890,661 (-) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.12 | NCBI | | | | | HuRef | 20 | 41,910,547 - 41,920,133 (-) | NCBI | | HuRef | | | CHM1_1 | 20 | 45,072,274 - 45,081,828 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 48,277,079 - 48,286,798 (-) | NCBI | | T2T-CHM13v2.0 | | |
|
Ocstamp (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 165,237,370 - 165,242,314 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 165,235,680 - 165,242,325 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 165,395,450 - 165,400,394 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 165,393,760 - 165,400,405 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 165,220,950 - 165,225,894 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 165,086,655 - 165,091,599 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 171,337,645 - 171,342,591 (-) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 85.53 | NCBI | | | | |
|
Ocstamp (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 174,550,420 - 174,560,907 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 154,131,113 - 154,141,611 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 154,132,328 - 154,136,991 (-) | Ensembl | | mRatBN7.2 Ensembl | | | Rnor_6.0 | 3 | 162,073,573 - 162,080,487 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 162,075,340 - 162,080,192 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 168,255,822 - 168,262,735 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 156,438,652 - 156,442,984 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 156,327,279 - 156,349,020 (-) | NCBI | | | | | Celera | 3 | 152,729,869 - 152,736,787 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
|
Ocstamp (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955445 | 10,836,545 - 10,842,410 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 10,836,404 - 10,842,811 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
OCSTAMP (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 52,276,361 - 52,285,823 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 52,269,480 - 52,278,928 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 42,873,552 - 42,883,785 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 43,958,499 - 43,968,118 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 43,958,736 - 43,968,110 (-) | Ensembl | panpan1.1 | | panPan2 | |
|
Ocstamp (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 191,147,882 - 191,155,622 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936514 | 6,601,637 - 6,608,785 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936514 | 6,601,580 - 6,608,785 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
OCSTAMP (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 48,703,941 - 48,711,144 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 48,703,937 - 48,711,690 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 54,443,438 - 54,450,669 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
OCSTAMP (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 17,331,486 - 17,340,460 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 17,332,024 - 17,340,162 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 65,975,515 - 65,983,666 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ocstamp (Heterocephalus glaber - naked mole-rat) |
|