CYP3A26 (cytochrome P450 3A26) - Rat Genome Database

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Gene: CYP3A26 (cytochrome P450 3A26) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: CYP3A26
Name: cytochrome P450 3A26
RGD ID: 12351879
Description: ENCODES a protein that exhibits steroid hydroxylase activity; testosterone 6-beta-hydroxylase activity; monooxygenase activity (ortholog); INVOLVED IN hormone metabolic process; organic hydroxy compound metabolic process; progesterone metabolic process; FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); integral component of membrane (inferred); INTERACTS WITH clofibrate; phenobarbital
Type: protein-coding
RefSeq Status: PROVISIONAL
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.169,777,663 - 9,815,345 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl69,777,659 - 9,869,352 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha611,453,380 - 11,491,417 (-)NCBI
ROS_Cfam_1.069,772,902 - 9,810,808 (-)NCBI
ROS_Cfam_1.0 Ensembl69,659,807 - 9,864,478 (-)Ensembl
UMICH_Zoey_3.169,580,175 - 9,597,918 (-)NCBI
UNSW_CanFamBas_1.069,609,350 - 9,644,621 (-)NCBI
UU_Cfam_GSD_1.069,811,507 - 9,849,368 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:9400018   PMID:9927614   PMID:11339816   PMID:18841518  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSCAFT00000023623   ⟹   ENSCAFP00000021934
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,836,690 - 9,869,352 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000023714   ⟹   ENSCAFP00000022014
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,777,685 - 9,810,252 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000061904   ⟹   ENSCAFP00000051448
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,836,690 - 9,866,331 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000068753   ⟹   ENSCAFP00000044265
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,778,460 - 9,815,341 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000070806   ⟹   ENSCAFP00000049540
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,777,659 - 9,869,352 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000074667   ⟹   ENSCAFP00000055117
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,777,685 - 9,869,276 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000077891   ⟹   ENSCAFP00000066156
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,778,460 - 9,869,352 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000085015   ⟹   ENSCAFP00000064544
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,778,460 - 9,869,352 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000086581   ⟹   ENSCAFP00000051896
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl69,778,460 - 9,869,352 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005473   ⟹   ENSCAFP00845004351
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,864,402 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005503   ⟹   ENSCAFP00845004371
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,859,294 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005534   ⟹   ENSCAFP00845004391
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,859,294 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005563   ⟹   ENSCAFP00845004415
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,810,804 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005601   ⟹   ENSCAFP00845004443
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,753,840 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005616   ⟹   ENSCAFP00845004457
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,659,807 - 9,703,566 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005626   ⟹   ENSCAFP00845004463
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,722,409 - 9,810,804 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005662   ⟹   ENSCAFP00845004491
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,772,924 - 9,810,808 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005681   ⟹   ENSCAFP00845004507
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,832,168 - 9,864,478 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845005689   ⟹   ENSCAFP00845004514
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl69,833,314 - 9,864,478 (-)Ensembl
RefSeq Acc Id: NM_001003338   ⟹   NP_001003338
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.169,777,663 - 9,815,345 (-)NCBI
Dog10K_Boxer_Tasha611,453,380 - 11,491,417 (-)NCBI
ROS_Cfam_1.069,772,902 - 9,810,808 (-)NCBI
UMICH_Zoey_3.169,580,175 - 9,597,918 (-)NCBI
UNSW_CanFamBas_1.069,609,350 - 9,644,621 (-)NCBI
UU_Cfam_GSD_1.069,811,507 - 9,849,368 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001003338 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAN47145 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001003338   ⟸   NM_001003338
- UniProtKB: Q8HZK1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000055117   ⟸   ENSCAFT00000074667
RefSeq Acc Id: ENSCAFP00000049540   ⟸   ENSCAFT00000070806
RefSeq Acc Id: ENSCAFP00000066156   ⟸   ENSCAFT00000077891
RefSeq Acc Id: ENSCAFP00000044265   ⟸   ENSCAFT00000068753
RefSeq Acc Id: ENSCAFP00000051896   ⟸   ENSCAFT00000086581
RefSeq Acc Id: ENSCAFP00000022014   ⟸   ENSCAFT00000023714
RefSeq Acc Id: ENSCAFP00000021934   ⟸   ENSCAFT00000023623
RefSeq Acc Id: ENSCAFP00000064544   ⟸   ENSCAFT00000085015
RefSeq Acc Id: ENSCAFP00000051448   ⟸   ENSCAFT00000061904
RefSeq Acc Id: ENSCAFP00845004514   ⟸   ENSCAFT00845005689
RefSeq Acc Id: ENSCAFP00845004507   ⟸   ENSCAFT00845005681
RefSeq Acc Id: ENSCAFP00845004351   ⟸   ENSCAFT00845005473
RefSeq Acc Id: ENSCAFP00845004443   ⟸   ENSCAFT00845005601
RefSeq Acc Id: ENSCAFP00845004391   ⟸   ENSCAFT00845005534
RefSeq Acc Id: ENSCAFP00845004463   ⟸   ENSCAFT00845005626
RefSeq Acc Id: ENSCAFP00845004415   ⟸   ENSCAFT00845005563
RefSeq Acc Id: ENSCAFP00845004371   ⟸   ENSCAFT00845005503
RefSeq Acc Id: ENSCAFP00845004457   ⟸   ENSCAFT00845005616
RefSeq Acc Id: ENSCAFP00845004491   ⟸   ENSCAFT00845005662

Promoters
RGD ID:13683548
Promoter ID:EPDNEW_C1616
Type:multiple initiation site
Name:CYP3A26_1
Description:cytochrome P450 3A26
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.169,815,355 - 9,815,415EPDNEW
Damaging Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain
6 9784456 9784457 A C snv Wolf (WO002_732), Chinese indigenous dogs (LJ8)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000014877 Ensembl
  ENSCAFG00030017294 UniProtKB/TrEMBL
  ENSCAFG00040017832 UniProtKB/TrEMBL
  ENSCAFG00845003103 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSCAFP00030027937.1 UniProtKB/TrEMBL
  ENSCAFP00030028032.1 UniProtKB/TrEMBL
  ENSCAFP00030028120.1 UniProtKB/TrEMBL
  ENSCAFP00030028198.1 UniProtKB/TrEMBL
  ENSCAFP00040028653 UniProtKB/TrEMBL
  ENSCAFP00040028721 UniProtKB/TrEMBL
  ENSCAFP00040028823 UniProtKB/TrEMBL
  ENSCAFP00040028952 UniProtKB/TrEMBL
  ENSCAFP00040029042 UniProtKB/TrEMBL
  ENSCAFP00040029083 UniProtKB/TrEMBL
  ENSCAFP00040029280 UniProtKB/TrEMBL
  ENSCAFP00040029313 UniProtKB/TrEMBL
  ENSCAFP00040029362 UniProtKB/TrEMBL
  ENSCAFP00040029389 UniProtKB/TrEMBL
  ENSCAFP00845004351.1 UniProtKB/TrEMBL
  ENSCAFP00845004371.1 UniProtKB/TrEMBL
  ENSCAFP00845004391.1 UniProtKB/TrEMBL
  ENSCAFP00845004415.1 UniProtKB/TrEMBL
  ENSCAFP00845004443.1 UniProtKB/TrEMBL
  ENSCAFP00845004457.1 UniProtKB/TrEMBL
  ENSCAFP00845004463.1 UniProtKB/TrEMBL
  ENSCAFP00845004491 ENTREZGENE
  ENSCAFP00845004491.1 UniProtKB/TrEMBL
  ENSCAFP00845004507.1 UniProtKB/TrEMBL
  ENSCAFP00845004514.1 UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00030032039.1 UniProtKB/TrEMBL
  ENSCAFT00030032144.1 UniProtKB/TrEMBL
  ENSCAFT00030032246.1 UniProtKB/TrEMBL
  ENSCAFT00030032335.1 UniProtKB/TrEMBL
  ENSCAFT00040032931 UniProtKB/TrEMBL
  ENSCAFT00040033008 UniProtKB/TrEMBL
  ENSCAFT00040033121 UniProtKB/TrEMBL
  ENSCAFT00040033269 UniProtKB/TrEMBL
  ENSCAFT00040033368 UniProtKB/TrEMBL
  ENSCAFT00040033413 UniProtKB/TrEMBL
  ENSCAFT00040033644 UniProtKB/TrEMBL
  ENSCAFT00040033679 UniProtKB/TrEMBL
  ENSCAFT00040033731 UniProtKB/TrEMBL
  ENSCAFT00040033765 UniProtKB/TrEMBL
  ENSCAFT00845005473.1 UniProtKB/TrEMBL
  ENSCAFT00845005503.1 UniProtKB/TrEMBL
  ENSCAFT00845005534.1 UniProtKB/TrEMBL
  ENSCAFT00845005563.1 UniProtKB/TrEMBL
  ENSCAFT00845005601.1 UniProtKB/TrEMBL
  ENSCAFT00845005616.1 UniProtKB/TrEMBL
  ENSCAFT00845005626.1 UniProtKB/TrEMBL
  ENSCAFT00845005662 ENTREZGENE
  ENSCAFT00845005662.1 UniProtKB/TrEMBL
  ENSCAFT00845005681.1 UniProtKB/TrEMBL
  ENSCAFT00845005689.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.630.10 UniProtKB/TrEMBL
InterPro Cyt_P450 UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/TrEMBL
  Cyt_P450_E_CYP3A UniProtKB/TrEMBL
  Cyt_P450_E_grp-I UniProtKB/TrEMBL
  Cyt_P450_E_grp-II UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/TrEMBL
KEGG Report cfa:415127 UniProtKB/TrEMBL
NCBI Gene CYP3A26 ENTREZGENE
Pfam p450 UniProtKB/TrEMBL
PRINTS EP450I UniProtKB/TrEMBL
  EP450II UniProtKB/TrEMBL
  EP450IICYP3A UniProtKB/TrEMBL
  P450 UniProtKB/TrEMBL
PROSITE CYTOCHROME_P450 UniProtKB/TrEMBL
Superfamily-SCOP SSF48264 UniProtKB/TrEMBL
UniProt A0A8C0NKJ9_CANLF UniProtKB/TrEMBL
  A0A8C0NMM7_CANLF UniProtKB/TrEMBL
  A0A8C0NNX8_CANLF UniProtKB/TrEMBL
  A0A8C0NVU4_CANLF UniProtKB/TrEMBL
  A0A8C0SYH1_CANLF UniProtKB/TrEMBL
  A0A8C0SZA0_CANLF UniProtKB/TrEMBL
  A0A8C0SZI4_CANLF UniProtKB/TrEMBL
  A0A8C0T0H6_CANLF UniProtKB/TrEMBL
  A0A8C0T0L6_CANLF UniProtKB/TrEMBL
  A0A8C0T0Z6_CANLF UniProtKB/TrEMBL
  A0A8C0T116_CANLF UniProtKB/TrEMBL
  A0A8C0T2Z2_CANLF UniProtKB/TrEMBL
  A0A8C0Z174_CANLF UniProtKB/TrEMBL
  A0A8I3MHC9_CANLF UniProtKB/TrEMBL
  A0A8I3MJ92_CANLF UniProtKB/TrEMBL
  A0A8I3MN11_CANLF UniProtKB/TrEMBL
  A0A8I3MP76_CANLF UniProtKB/TrEMBL
  A0A8I3MQC6_CANLF UniProtKB/TrEMBL
  A0A8I3MUY1_CANLF UniProtKB/TrEMBL
  A0A8I3RSN1_CANLF UniProtKB/TrEMBL
  A0A8I3RSN4_CANLF UniProtKB/TrEMBL
  A0A8I3RSP1_CANLF UniProtKB/TrEMBL
  Q8HZK1 ENTREZGENE, UniProtKB/TrEMBL