GCLM (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 6 | 55,204,602 - 55,244,217 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 6 | 57,930,482 - 57,952,133 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 6 | 55,598,315 - 55,619,977 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 6 | 55,598,408 - 55,617,490 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 6 | 55,278,061 - 55,299,711 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 6 | 55,263,100 - 55,284,829 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 6 | 55,715,747 - 55,737,399 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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GCLM (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 1 | 93,885,199 - 93,909,430 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 1 | 93,885,199 - 93,909,456 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 1 | 94,350,755 - 94,374,986 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 1 | 94,125,178 - 94,147,600 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 1 | 94,064,610 - 94,087,033 | NCBI | | | | | Celera | 1 | 92,606,277 - 92,628,698 (-) | NCBI | | Celera | | | Cytogenetic Map | 1 | p22.1 | NCBI | | | | | HuRef | 1 | 92,473,642 - 92,495,998 (-) | NCBI | | HuRef | | | CHM1_1 | 1 | 94,467,558 - 94,489,979 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 1 | 93,733,450 - 93,757,695 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Gclm (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 3 | 122,039,206 - 122,060,864 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 3 | 122,039,206 - 122,064,381 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 3 | 122,245,487 - 122,267,215 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 3 | 122,245,557 - 122,270,732 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 3 | 121,948,510 - 121,969,566 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 3 | 122,237,614 - 122,258,670 (+) | NCBI | | MGSCv36 | mm8 | | MGSCv36 | 3 | 122,610,732 - 122,631,895 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 3 | 128,652,324 - 128,663,438 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | G1 | NCBI | | | | | cM Map | 3 | 52.94 | NCBI | | | | |
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Gclm (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 2 | 213,032,135 - 213,052,192 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 2 | 210,347,482 - 210,367,537 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 2 | 210,347,482 - 210,367,535 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 2 | 218,020,579 - 218,040,873 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 2 | 215,928,345 - 215,948,639 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 2 | 210,770,305 - 210,790,599 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 2 | 225,827,504 - 225,847,876 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 2 | 225,827,504 - 225,847,874 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 2 | 243,862,903 - 243,883,275 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 2 | 218,895,434 - 218,915,491 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 2 | 218,858,495 - 218,878,551 (+) | NCBI | | | | | Celera | 2 | 202,777,122 - 202,797,150 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | q42 | NCBI | | | | |
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Gclm (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955423 | 782,468 - 805,384 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955423 | 782,468 - 805,384 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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GCLM (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 1 | 133,110,998 - 133,133,736 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 1 | 132,267,567 - 132,291,710 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 1 | 96,548,850 - 96,573,273 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 1 | 95,278,665 - 95,298,854 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 1 | 95,278,665 - 95,297,893 (-) | Ensembl | panpan1.1 | | panPan2 | |
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LOC101977655 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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GCLM (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 123,371,193 - 123,390,131 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 123,371,198 - 123,390,130 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 135,017,027 - 135,035,890 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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GCLM (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 20 | 39,339,948 - 39,359,980 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 20 | 39,339,908 - 39,359,430 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666033 | 78,685,244 - 78,710,789 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Gclm (Heterocephalus glaber - naked mole-rat) |
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