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Gene: HRH1 (histamine receptor H1) Canis lupus familiaris

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Symbol:

HRH1

Name:

histamine receptor H1

RGD ID:

12348470

Description:

ENCODES a protein that exhibits histamine binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); memory (ortholog); negative regulation of steroid biosynthetic process (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); atherosclerosis (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN cytosol (inferred); membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

histamine H1 receptor; histamine receptor subtype H1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	HRH1 (histamine receptor H1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Hrh1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Hrh1 (histamine receptor H 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Hrh1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	HRH1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Hrh1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	HRH1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	HRH1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Hrh1 (histamine receptor H1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	7,160,903 - 7,236,147 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	7,162,393 - 7,235,869 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	7,195,842 - 7,270,946 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	7,190,337 - 7,265,418 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	7,190,251 - 7,265,315 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	6,906,408 - 6,981,475 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	7,262,781 - 7,337,859 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	7,234,680 - 7,309,540 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

allergic rhinitis (ISO)

atherosclerosis (ISO)

Extravasation of Diagnostic and Therapeutic Materials (ISO)

Hypotension (ISO)

Neurodevelopmental Disorders (ISO)

Pain (ISO)

Pruritus (ISO)

respiratory allergy (ISO)

rhinitis (ISO)

schizophrenia (ISO)

telangiectasis (ISO)

withdrawal disorder (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to histamine (IEA)

chemical synaptic transmission (IBA,ISO)

G protein-coupled receptor signaling pathway (IEA)

G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (IBA)

memory (IEA,ISO)

negative regulation of steroid biosynthetic process (ISO)

positive regulation of nitric oxide biosynthetic process (ISO)

positive regulation of vasoconstriction (IEA,ISO)

regulation of synaptic plasticity (IEA,ISO)

regulation of vascular permeability (IEA)

response to gravity (ISO)

visual learning (IEA,ISO)

Cellular Component

cytosol (IEA)

dendrite (IBA)

membrane (IEA)

plasma membrane (IBA,IEA)

synapse (IEA)

Molecular Function

G protein-coupled receptor activity (IEA)

histamine binding (ISO)

histamine receptor activity (IBA,IEA)

References

Additional References at PubMed

PMID:7891345	PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

HRH1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	7,160,903 - 7,236,147 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	7,162,393 - 7,235,869 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	7,195,842 - 7,270,946 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	7,190,337 - 7,265,418 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	7,190,251 - 7,265,315 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	6,906,408 - 6,981,475 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	7,262,781 - 7,337,859 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	7,234,680 - 7,309,540 (-)	NCBI		UU_Cfam_GSD_1.0

HRH1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	11,137,238 - 11,263,557 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	11,137,093 - 11,263,557 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	11,178,924 - 11,305,243 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	11,153,779 - 11,279,939 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	3	11,269,399 - 11,279,415	NCBI
Celera	3	11,114,216 - 11,240,363 (+)	NCBI		Celera
Cytogenetic Map	3	p25.3	NCBI
HuRef	3	11,113,586 - 11,239,205 (+)	NCBI		HuRef
CHM1_1	3	11,128,810 - 11,254,995 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	11,131,678 - 11,258,484 (+)	NCBI		T2T-CHM13v2.0

Hrh1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	114,374,897 - 114,459,432 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	114,374,897 - 114,460,257 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	114,397,936 - 114,483,298 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	114,397,936 - 114,483,296 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	114,347,930 - 114,433,290 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	114,363,531 - 114,448,891 (+)	NCBI		MGSCv36	mm8
Celera	6	116,219,517 - 116,304,883 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.05	NCBI

Hrh1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	149,120,511 - 149,204,267 (+)	NCBI		GRCr8
mRatBN7.2	4	147,564,963 - 147,649,353 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	147,645,995 - 147,647,455 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	152,949,786 - 153,033,522 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	148,730,672 - 148,814,402 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	147,360,109 - 147,443,854 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	146,374,596 - 146,458,148 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	146,455,332 - 146,457,074 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	209,668,412 - 209,751,766 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	150,431,239 - 150,432,699 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	150,676,079 - 150,677,540 (+)	NCBI
Celera	4	136,197,254 - 136,198,714 (+)	NCBI		Celera
RH 3.4 Map	4	950.0	RGD
Cytogenetic Map	4	q42	NCBI

Hrh1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	14,067,405 - 14,068,853 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	14,022,332 - 14,069,931 (+)	NCBI	ChiLan1.0	ChiLan1.0

HRH1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	11,134,626 - 11,259,909 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	11,139,386 - 11,264,669 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	11,074,451 - 11,199,871 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	11,439,705 - 11,545,509 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	11,541,294 - 11,542,757 (+)	Ensembl	panpan1.1		panPan2

Hrh1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	16,634,611 - 16,727,741 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	2,183,831 - 2,185,297 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	2,182,053 - 2,185,297 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

HRH1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	67,209,127 - 67,411,170 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	67,209,261 - 67,411,174 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	74,579,748 - 74,631,302 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

HRH1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	47,187,156 - 47,298,761 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	47,295,011 - 47,296,471 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	119,219,292 - 119,336,578 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Hrh1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624943	484,942 - 486,390 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624943	483,230 - 505,678 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in HRH1
871 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	21	15	5	6	5	6	32	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005632155	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426919	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426920	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426922	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502713	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502714	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502716	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565632	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565633	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565634	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565635	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629770	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002616583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002616584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002616585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297600	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297601	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297602	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340814	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340815	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340816	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374586	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374587	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408580	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408581	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408582	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	S75111	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000008071 ⟹ ENSCAFP00000032854

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	7,162,393 - 7,235,869 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011712 ⟹ ENSCAFP00845009143

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	7,190,251 - 7,265,315 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011727 ⟹ ENSCAFP00845009156

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	7,190,340 - 7,264,682 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845011739 ⟹ ENSCAFP00845009163

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	7,190,343 - 7,264,634 (-)	Ensembl

RefSeq Acc Id:

XM_005632155 ⟹ XP_005632212

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	7,160,903 - 7,235,978 (-)	NCBI
Dog10K_Boxer_Tasha	20	7,195,842 - 7,270,911 (-)	NCBI

Sequence:

show sequence

CTGCCAGAGGCAGGGGCGGAGGCTCCCGGGGACCTGCGGAAGAACCACCCCCCTACCCTCACCC
AGGCAACCTCCCCGGGCCACACGGCTAGATTCAATCTGGCGCAGGATGCTAATGGAAACACCTT
GTCATTTGGAACGTGAGCTCACCTGGAGGGGGCTACGGAGAAATGGGGGAGGGGGGCTGGCGTT
CCAGACCTTGGAGGTCTCTCCAGTTCCCCAGGAAACCTCTCGGGCAGGGTCCCTATCCCGCAGT
CTTGGTGCTTCTCTGGCTGGCTCTGTCCGTCTGTTGGTATATCGGGCGCTCCCGGGGTGAGTGG
AGGTGGGGCCTCACCGTCTGCGGGTGGCTCTGCCAGACATCACCCCCTCGGACTTTCGACCTCG
CCTTCTCTATCTGGACTGACCTATTTCCGTCGCCCACTCGCAGGGAGGGAACCACAGCTGGAGG
CTGCTCTTGTGCCAATGAACCTTCCCAATTCTTCCTGCATCTTCGAAGACAAGATGTGTGAGGG
GAACAAGACCACCATAGCCAACCCCAAACTGATGCCCCTTGTGGTGTTCCTGAGTGCCATCTCC
TTGGTCACAGTGGGACTCAACCTGCTGGTCCTGTATGCTGTGCGGAGCGAGCGAAAGCTACACA
CCGTGGGGAACCTGTACATTGTCAGCCTCTCTGTGGCAGACCTGATCGTGGGAGCTGTTGTCAT
GCCCATGAACATCCTTTACCTCCTCATGTCCAGGTGGTCCCTAGGCCAGCCTCTCTGCCTATTT
TGGCTTTCTATGGACTATGTGGCCAGTACAGCATCCATTTTCAGTGTCTTCATCTTGTGCATTG
ATCGTTACCGCTCTGTCCGGCAGCCCCTCAGATACCTGAAGTATCGTACCAAGACCCGAGCATC
AGCCACCATCTTGGGGGCCTGGTTTCTCTCCTTCTTGTGGATTATTCCCATTCTGGGATGGCAT
CACTTTATGTCACAGACCTCAGGACACCGGGAAGACAAGTGTGAGACAGACTTCTATGATGTCA
CCTGGTTCAAGATCATGACTGCCATCATCAACTTCTATCTGCCCACCTTGCTCATGCTCTGGTT
CTATGCCAGGATCTACAAGGCTGTACGGCAGCACTGTCAGCACCGAGAACTCATCAATGGATCC
CTCCCTTCCTTCTCTGAACCTAAGCTGAAGCCAGAGAACCCCAAGGCAGGGGCCAAGAAACCAG
GGAAGGAGTCTCCTTGGGAATTTCTGAAAAGGAAGTCAAAAGATGCCAGTGGTGAGCCTGTCTT
GAAGCCACCATCCCAAGATTCAGAGGAGATGAAATCCCCAAGTGTCTTCCGTCAAGAGGAGGAC
AGAGAGGTGGACAAACTCCAGTGCTTTCCACTTAACATTGTGCAGGTGCAGACTGAGGCAGAGG
GGAGTGTCAGGAGTTACGTAGCTATCAACCAGAGCCAGAGCATGCTTGAGATGGATGAACAGGG
TCTGAACATGCGTGGGGCCAATGAGACATCAGAGGATCAGATCCTAGGTGATAGCCAGTCTTTC
TCTCGGACAGACTCAGACACCCCCACAGAGTCAGGATCAGGGAAAGGGAAACCTAGAAGTGAGT
CTAGCACAGGCCTGGATTATATCAAGTTCACTTGGAAGAGGCTCCGCTCACATTCAAGACAATA
TGTGTCTGGGTTACACATGAACCGAGAACGAAAGGCTGCCAAACAATTGGGTTTTATTATGGCG
GCCTTCATCCTTTGCTGGATTCCTTACTTCATCTTCTTCATGGTCATTGCTTTCTGCAAGAGCT
GTTGCAATGAGCGTGTGCACATGTTCACCATCTGGCTGGGCTATATCAACTCCACGCTGAACCC
CCTCATTTATCCCTTATGCAATGAAAACTTCAAGAAGACATTCAAGAAAATTCTGCACATTCGC
TCCTAAGGGAGGCGACCAGGGGTTGCAACCAAAGTGACACTTAGGATGGTCCCGAAGAAAACAG
AGGATGAAGGCCTGTGAGTTGCCAGGCACCTGGGCTTTCTGGAGTCAGAAGAATAGTCTTAAAG
ACTAGGTAACTTAGAAAGTTCTTAGGCACCATTGACAGAACAGCAGATGGCAGTGGTCAACAGA
GAGAGCAGGATGTATCCAAGACAATCGGATCTGGATGAGTTCTCCTGCTCCTCAGGAAATGTGA
GAGCCTCAGACTCTCAATGTAATTCAAGCTTGCAGACTGGAATTAATTGGAAACTGAAGGGACA
CATGGAGAGAGTTTTACTGCAGAATTAGATGGAATTCTCAAGCCTTCCTGGAATGGAGTTATAG
GACTGTGCAGAGACCTTACATATGCGGATAGATGCTGTCCCTTTCCAGGGGTCACCTTGATAGG
CATTGACAGCTATTCCATCGTGACTGTCACTTCTCAGAACACCTGTCCTCTGAGGCTCTTCTAC
AGTTTTCTCCAGAACCAGTGTCTGAACCACGTTGGAAATTCTACCTTATTGTTTCTCATTCCTA
CATATCTTAGAGTTGGTAGGACACTATGCAGCTTGATTGTTTTCAATCCCACATTCCTTTTGAC
TATTAACAAAATAGTGATAAAAGCTACCCTCAAAAGAAAGAGAAAAAGGGTGCTTTTTAATGGT
TGCACAATAAAAAGCAAACAAAAAATGGGAATGGGGAGAAGAAAGCCATATTTCTTGAAGGCTG
GGTCATGTTTATCTCATTTAAGCTCCATGACACCTCACCGCAGGAGGACGGTATTACTAGGGGA
GCAGATTGAGGGACATAGCTAGTTATGTGAGGGAGCTAGAATGAAAATCCAGTGGGGTAGTGGG
GCTGCGGCTCGTTGTAACACATTTCCTCCAAAAGGCAAAAATGTGTCCTGTTAAGTATACAACA
CACGCATGCACACACACACACTATTCCTGAGAGTGGTGGCAATTCTCAAAAGGATGTGTTGAGA
GAAGGAACAGCTGACATAGAATATGCCTGAGGCTGCAGAAGGTGATACTTTGAAGGAACAGTTG
CATTTTTATCTGTGAGTTCTGCTGTGTTTGTTGAAGAAGTCATCATGTTCTTTTATAGTTACAG
TTCTTCAGTAAAAACTAGCAAAGTCATGGAAACATACAGTTTTCCTTGGGGTTTATATCTCAAT
CTGGTTGTGATTTATATTTTAAAACTTAATGGCAAGCTGTCATATATGTAGCAAAATGGAGTGC
GTGTACAAGCTGGTATTTTGTGTCTTGTGTTCCTATTTGCATGATCTGTTACAATGACAGATTT
TTACCTACCTAAAATATATTTGAAACTATACTGTTATGACTTTGATTTATTTAATTCTGCCTTT
CTGAGTCTCTTGGACTGAAAAGATGTATTGAAACGTACTGTCAAATATTATGAGATCTAATACA
GCGTTTCTCTTTGGTTTCTGGTCA

hide sequence

RefSeq Acc Id:

XM_038426919 ⟹ XP_038282847

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,190,337 - 7,264,674 (-)	NCBI

RefSeq Acc Id:

XM_038426920 ⟹ XP_038282848

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,190,337 - 7,265,383 (-)	NCBI

RefSeq Acc Id:

XM_038426921 ⟹ XP_038282849

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,190,337 - 7,264,637 (-)	NCBI

RefSeq Acc Id:

XM_038426922 ⟹ XP_038282850

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,190,337 - 7,264,271 (-)	NCBI

RefSeq Acc Id:

XM_038455390 ⟹ XP_038311318

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	7,195,842 - 7,270,198 (-)	NCBI

RefSeq Acc Id:

XM_038455391 ⟹ XP_038311319

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	7,195,842 - 7,270,161 (-)	NCBI

RefSeq Acc Id:

XM_038455392 ⟹ XP_038311320

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	7,195,842 - 7,269,795 (-)	NCBI

RefSeq Acc Id:

XM_038502713 ⟹ XP_038358641

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,906,408 - 6,980,727 (-)	NCBI

RefSeq Acc Id:

XM_038502714 ⟹ XP_038358642

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,906,408 - 6,981,440 (-)	NCBI

RefSeq Acc Id:

XM_038502715 ⟹ XP_038358643

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,906,408 - 6,980,690 (-)	NCBI

RefSeq Acc Id:

XM_038502716 ⟹ XP_038358644

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,906,408 - 6,980,330 (-)	NCBI

RefSeq Acc Id:

XM_038565632 ⟹ XP_038421560

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,234,680 - 7,308,795 (-)	NCBI

RefSeq Acc Id:

XM_038565633 ⟹ XP_038421561

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,234,680 - 7,309,505 (-)	NCBI

RefSeq Acc Id:

XM_038565634 ⟹ XP_038421562

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,234,680 - 7,308,758 (-)	NCBI

RefSeq Acc Id:

XM_038565635 ⟹ XP_038421563

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,234,680 - 7,308,392 (-)	NCBI

RefSeq Acc Id:

XM_038629767 ⟹ XP_038485695

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,262,781 - 7,337,112 (-)	NCBI

RefSeq Acc Id:

XM_038629768 ⟹ XP_038485696

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,262,781 - 7,337,824 (-)	NCBI

RefSeq Acc Id:

XM_038629769 ⟹ XP_038485697

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,262,781 - 7,337,075 (-)	NCBI

RefSeq Acc Id:

XM_038629770 ⟹ XP_038485698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,262,781 - 7,336,709 (-)	NCBI

RefSeq Acc Id:

XR_002616583

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	7,196,022 - 7,236,146 (-)	NCBI
Dog10K_Boxer_Tasha	20	7,230,637 - 7,270,943 (-)	NCBI

Sequence:

show sequence

ACCTTTCTTGCCCTCTGAACTTGAGTGTCTCTTTCTGAAGCCTGGAGATAAGATCTGAGGTCAC
AACTGCTATGAGGTTCAGATGGAGTTTTCCTCACACTGAGCAAAGAACACTTTGCCTCTCTTGC
CTGGCTTTGGAACTGAAGGCAGCCAGTAAGGATTCTCAGGCTGCCAGAGGCAGGGGCGGAGGCT
CCCGGGGACCTGCGGAAGAACCACCCCCCTACCCTCACCCAGGCAACCTCCCCGGGCCACACGG
CTAGATTCAATCTGGCGCAGGATGCTAATGGAAACACCTTGTCATTTGGAACGTGAGCTCACCT
GGAGGGGGCTACGGAGAAATGGGGGAGGGGGGCTGGCGTTCCAGACCTTGGAGGTCTCTCCAGT
TCCCCAGGAAACCTCTCGGGCAGGGTCCCTATCCCGCAGTCTTGGTGCTTCTCTGGCTGGCTCT
GTCCGTCTGTTGGTATATCGGGCGCTCCCGGGGTGAGTGGAGGTGGGGCCTCACCGTCTGCGGG
TGGCTCTGCCAGACATCACCCCCTCGGACTTTCGACCTCGCCTTCTCTATCTGGACTGACCTAT
TTCCGTCGCCCACTCGCAGCCAAACTGTTCATCAAAGACTTCTCTCCCAGCTGTGTACTGTTGC
TGATGCTACAGTGTTAGCCTCCAGGAGCTAAAGAAGAAAGACCACAACTGGCAGGTCATGCCTG
GGAAGGCCCTGCCCTGCCTTTTGCCAGCTGGTGATTGCAGCACATCTGAATTTGGACCCACCGC
ATTCAAGGACTCTCTAGTCAATATGGCTGTGACCACTTACTGGGTGGCCCAAGTCCAGCCGGTC
TTGAGGAGGAGCCAGTTGGATCCCGCCCATCTCTCTCGGGCCTTTGCATGCACTGTTCCTGCTG
CCTGCAGTCTCCTTGCCTGGCTAACTCCCACTAAGGAAGACACACTTAGAGAGGGATGGTTCTT
CCTCAGGATGTTGTCATGTGCGAGTGTGACCTCTGAGCTCCTGGCAGCCATCTTGTGACCAGGA
GGTGATCTGGTTTGAGGATATTCCTGACAGACACCGAGGATGGCAGAGACAATGATGTCTTTGA
GGTGTTGAATTAACCAACTCTGGAGCTGCCCTAACTCAAGACTTCTTGTCAGAGGGAGAATATA
TTTCCTTATTACATAAGCCAAGTGTGTTGGGGTTTTCTGCTACTTTTAGCCTAAACCATCCTAA
CGATTACACTGTACCATGGAGAAACAGTATAGTCCGGGACCGAGTGGAGAATACAGCAGGGACA
TGGGCTCTGACTCCAGCACTGAGGGGCCTGGGGTATCTTTTGTGCACAAATTGGATGCCACTTT
CACACAAAGCCTTCCTAGAGCACTGCCCTTCCTCCCCAGCCTCCGAGGAAGTCATTCCTCCTTA
CTCTGGACTCCTCTATGTATCTTTTTTTTTTTTTTTTCCTCTGTGTATCTTGATAATCTATTCA
TGTGTCTTCTCTCCCTGCTGCTTGTGAGCTCCCCAAGAGGAGGGCCTGTGTGTTGGTCATTTTT
GTATCCCCCCAGTTATATCCTATGCATAGTAGGTGCTTAAAAATGATTGAGGAATAAATGGAAG
GGCAAATAATATTAATATTTCTACTTCCTAATTTGTAAGACAGAAAGCATTTCCCTTAAGCATT
GCACCTGGGCTGACA

hide sequence

RefSeq Acc Id:

XR_002616584

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	7,196,022 - 7,236,147 (-)	NCBI
Dog10K_Boxer_Tasha	20	7,230,635 - 7,270,943 (-)	NCBI

Sequence:

show sequence

TACCTTTCTTGCCCTCTGAACTTGAGTGTCTCTTTCTGAAGCCTGGAGATAAGATCTGAGGTCA
CAACTGCTATGAGGTTCAGATGGAGTTTTCCTCACACTGAGCAAAGAACACTTTGCCTCTCTTG
CCTGGCTTTGGAACTGAAGGCAGCCAGTAAGGATTCTCAGGCTGCCAGAGGCAGGGGCGGAGGC
TCCCGGGGACCTGCGGAAGAACCACCCCCCTACCCTCACCCAGGCAACCTCCCCGGGCCACACG
GCTAGATTCAATCTGGCGCAGGATGCTAATGGAAACACCTTGTCATTTGGAACGTGAGCTCACC
TGGAGGGGGCTACGGAGAAATGGGGGAGGGGGGCTGGCGTTCCAGACCTTGGAGGTCTCTCCAG
TTCCCCAGGAAACCTCTCGGGCAGGGTCCCTATCCCGCAGTCTTGGTGCTTCTCTGGCTGGCTC
TGTCCGTCTGTTGGTATATCGGGCGCTCCCGGGGTGAGTGGAGGTGGGGCCTCACCGTCTGCGG
GTGGCTCTGCCAGACATCACCCCCTCGGACTTTCGACCTCGCCTTCTCTATCTGGACTGACCTA
TTTCCGTCGCCCACTCGCAGCTGTGTACTGTTGCTGATGCTACAGTGTTAGCCTCCAGGAGCTA
AAGAAGAAAGACCACAACTGGCAGGTCATGCCTGGGAAGGCCCTGCCCTGCCTTTTGCCAGCTG
GTGATTGCAGCACATCTGAATTTGGACCCACCGCATTCAAGGACTCTCTAGTCAATATGGCTGT
GACCACTTACTGGGTGGCCCAAGTCCAGCCGGTCTTGAGGAGGAGCCAGTTGGATCCCGCCCAT
CTCTCTCGGGCCTTTGCATGCACTGTTCCTGCTGCCTGCAGTCTCCTTGCCTGGCTAACTCCCA
CTAAGGAAGACACACTTAGAGAGGGATGGTTCTTCCTCAGGATGTTGTCATGTGCGAGTGTGAC
CTCTGAGCTCCTGGCAGCCATCTTGTGACCAGGAGGTGATCTGGTTTGAGGATATTCCTGACAG
ACACCGAGGATGGCAGAGACAATGATGTCTTTGAGGTGTTGAATTAACCAACTCTGGAGCTGCC
CTAACTCAAGACTTCTTGTCAGAGGGAGAATATATTTCCTTATTACATAAGCCAAGTGTGTTGG
GGTTTTCTGCTACTTTTAGCCTAAACCATCCTAACGATTACACTGTACCATGGAGAAACAGTAT
AGTCCGGGACCGAGTGGAGAATACAGCAGGGACATGGGCTCTGACTCCAGCACTGAGGGGCCTG
GGGTATCTTTTGTGCACAAATTGGATGCCACTTTCACACAAAGCCTTCCTAGAGCACTGCCCTT
CCTCCCCAGCCTCCGAGGAAGTCATTCCTCCTTACTCTGGACTCCTCTATGTATCTTTTTTTTT
TTTTTTTCCTCTGTGTATCTTGATAATCTATTCATGTGTCTTCTCTCCCTGCTGCTTGTGAGCT
CCCCAAGAGGAGGGCCTGTGTGTTGGTCATTTTTGTATCCCCCCAGTTATATCCTATGCATAGT
AGGTGCTTAAAAATGATTGAGGAATAAATGGAAGGGCAAATAATATTAATATTTCTACTTCCTA
ATTTGTAAGACAGAAAGCATTTCCCTTAAGCATTGCACCTGGGCTGACA

hide sequence

RefSeq Acc Id:

XR_002616585

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	7,196,022 - 7,236,147 (-)	NCBI
Dog10K_Boxer_Tasha	20	7,230,632 - 7,270,946 (-)	NCBI

Sequence:

show sequence

TACCTTTCTTGCCCTCTGAACTTGAGTGTCTCTTTCTGAAGCCTGGAGATAAGATCTGAGGTCA
CAACTGCTATGAGGTTCAGATGGAGTTTTCCTCACACTGAGCAAAGAACACTTTGCCTCTCTTG
CCTGGCTTTGGAACTGAAGGCAGCCAGTAAGGATTCTCAGGCTGCCAGAGGCAGGGGCGGAGGC
TCCCGGGGACCTGCGGAAGAACCACCCCCCTACCCTCACCCAGGCAACCTCCCCGGGCCACACG
GCTAGATTCAATCTGGCGCAGGATGCTAATGGAAACACCTTGTCATTTGGAACGTGAGCTCACC
TGGAGGGGGCTACGGAGAAATGGGGGAGGGGGGCTGGCGTTCCAGACCTTGGAGGTCTCTCCAG
TTCCCCAGGAAACCTCTCGGGCAGGGTCCCTATCCCGCAGTCTTGGTGCTTCTCTGGCTGGCTC
TGTCCGTCTGTTGGTATATCGGGCGCTCCCGGGGTGAGTGGAGGTGGGGCCTCACCGTCTGCGG
GTGGCTCTGCCAGACATCACCCCCTCGGACTTTCGACCTCGCCTTCTCTATCTGGACTGACCTA
TTTCCGTCGCCCACTCGCAGAAAAGACATGATCCTTCCAGGCAGAGATTATGTGAAGAATTAAG
AATTCCATAGGACCACATCTGCACATCTCAGCGGAACTGAAACTGATGATCACTCACTCTTAAT
TGGAAATGCTGGCTGGACCATGCTGAAAGAGAATGAATGAAAACACACAGGGCTGTGTACTGTT
GCTGATGCTACAGTGTTAGCCTCCAGGAGCTAAAGAAGAAAGACCACAACTGGCAGGTCATGCC
TGGGAAGGCCCTGCCCTGCCTTTTGCCAGCTGGTGATTGCAGCACATCTGAATTTGGACCCACC
GCATTCAAGGACTCTCTAGTCAATATGGCTGTGACCACTTACTGGGTGGCCCAAGTCCAGCCGG
TCTTGAGGAGGAGCCAGTTGGATCCCGCCCATCTCTCTCGGGCCTTTGCATGCACTGTTCCTGC
TGCCTGCAGTCTCCTTGCCTGGCTAACTCCCACTAAGGAAGACACACTTAGAGAGGGATGGTTC
TTCCTCAGGATGTTGTCATGTGCGAGTGTGACCTCTGAGCTCCTGGCAGCCATCTTGTGACCAG
GAGGTGATCTGGTTTGAGGATATTCCTGACAGACACCGAGGATGGCAGAGACAATGATGTCTTT
GAGGTGTTGAATTAACCAACTCTGGAGCTGCCCTAACTCAAGACTTCTTGTCAGAGGGAGAATA
TATTTCCTTATTACATAAGCCAAGTGTGTTGGGGTTTTCTGCTACTTTTAGCCTAAACCATCCT
AACGATTACACTGTACCATGGAGAAACAGTATAGTCCGGGACCGAGTGGAGAATACAGCAGGGA
CATGGGCTCTGACTCCAGCACTGAGGGGCCTGGGGTATCTTTTGTGCACAAATTGGATGCCACT
TTCACACAAAGCCTTCCTAGAGCACTGCCCTTCCTCCCCAGCCTCCGAGGAAGTCATTCCTCCT
TACTCTGGACTCCTCTATGTATCTTTTTTTTTTTTTTTTCCTCTGTGTATCTTGATAATCTATT
CATGTGTCTTCTCTCCCTGCTGCTTGTGAGCTCCCCAAGAGGAGGGCCTGTGTGTTGGTCATTT
TTGTATCCCCCCAGTTATATCCTATGCATAGTAGGTGCTTAAAAATGATTGAGGAATAAATGGA
AGGGCAAATAATATTAATATTTCTACTTCCTAATTTGTAAGACAGAAAGCATTTCCCTTAAGCA
TTGCACCTGGGCTGACA

hide sequence

RefSeq Acc Id:

XR_005297600

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,225,137 - 7,265,415 (-)	NCBI

RefSeq Acc Id:

XR_005297601

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,225,135 - 7,265,415 (-)	NCBI

RefSeq Acc Id:

XR_005297602

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	7,225,132 - 7,265,418 (-)	NCBI

RefSeq Acc Id:

XR_005340814

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,941,213 - 6,981,472 (-)	NCBI

RefSeq Acc Id:

XR_005340815

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,941,211 - 6,981,473 (-)	NCBI

RefSeq Acc Id:

XR_005340816

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	6,941,208 - 6,981,475 (-)	NCBI

RefSeq Acc Id:

XR_005374583

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,269,471 - 7,309,537 (-)	NCBI

RefSeq Acc Id:

XR_005374585

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,269,463 - 7,309,538 (-)	NCBI

RefSeq Acc Id:

XR_005374586

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,269,469 - 7,309,538 (-)	NCBI

RefSeq Acc Id:

XR_005374587

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	7,269,466 - 7,309,540 (-)	NCBI

RefSeq Acc Id:

XR_005408580

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,297,563 - 7,337,856 (-)	NCBI

RefSeq Acc Id:

XR_005408581

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,297,561 - 7,337,857 (-)	NCBI

RefSeq Acc Id:

XR_005408582

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	7,297,558 - 7,337,859 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005632212	(Get FASTA)	NCBI Sequence Viewer
	XP_038282847	(Get FASTA)	NCBI Sequence Viewer
	XP_038282848	(Get FASTA)	NCBI Sequence Viewer
	XP_038282849	(Get FASTA)	NCBI Sequence Viewer
	XP_038282850	(Get FASTA)	NCBI Sequence Viewer
	XP_038311318	(Get FASTA)	NCBI Sequence Viewer
	XP_038311319	(Get FASTA)	NCBI Sequence Viewer
	XP_038311320	(Get FASTA)	NCBI Sequence Viewer
	XP_038358641	(Get FASTA)	NCBI Sequence Viewer
	XP_038358642	(Get FASTA)	NCBI Sequence Viewer
	XP_038358643	(Get FASTA)	NCBI Sequence Viewer
	XP_038358644	(Get FASTA)	NCBI Sequence Viewer
	XP_038421560	(Get FASTA)	NCBI Sequence Viewer
	XP_038421561	(Get FASTA)	NCBI Sequence Viewer
	XP_038421562	(Get FASTA)	NCBI Sequence Viewer
	XP_038421563	(Get FASTA)	NCBI Sequence Viewer
	XP_038485695	(Get FASTA)	NCBI Sequence Viewer
	XP_038485696	(Get FASTA)	NCBI Sequence Viewer
	XP_038485697	(Get FASTA)	NCBI Sequence Viewer
	XP_038485698	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAD14167	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000032854.4
	ENSCAFP00000068648.1
	ENSCAFP00000074791.1
	ENSCAFP00030007606.1
	ENSCAFP00040037321.1
	ENSCAFP00845009143
	ENSCAFP00845009143.1
	ENSCAFP00845009156
	ENSCAFP00845009156.1
	ENSCAFP00845009163
	ENSCAFP00845009163.1

RefSeq Acc Id:

XP_005632212 ⟸ XM_005632155

- UniProtKB:

A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MNLPNSSCIFEDKMCEGNKTTIANPKLMPLVVFLSAISLVTVGLNLLVLYAVRSERKLHTVGNL
YIVSLSVADLIVGAVVMPMNILYLLMSRWSLGQPLCLFWLSMDYVASTASIFSVFILCIDRYRS
VRQPLRYLKYRTKTRASATILGAWFLSFLWIIPILGWHHFMSQTSGHREDKCETDFYDVTWFKI
MTAIINFYLPTLLMLWFYARIYKAVRQHCQHRELINGSLPSFSEPKLKPENPKAGAKKPGKESP
WEFLKRKSKDASGEPVLKPPSQDSEEMKSPSVFRQEEDREVDKLQCFPLNIVQVQTEAEGSVRS
YVAINQSQSMLEMDEQGLNMRGANETSEDQILGDSQSFSRTDSDTPTESGSGKGKPRSESSTGL
DYIKFTWKRLRSHSRQYVSGLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKSCCNER
VHMFTIWLGYINSTLNPLIYPLCNENFKKTFKKILHIRS

hide sequence

Ensembl Acc Id:

ENSCAFP00000032854 ⟸ ENSCAFT00000008071

RefSeq Acc Id:

XP_038358642 ⟸ XM_038502714

RefSeq Acc Id:

XP_038358641 ⟸ XM_038502713

RefSeq Acc Id:

XP_038358643 ⟸ XM_038502715

RefSeq Acc Id:

XP_038358644 ⟸ XM_038502716

RefSeq Acc Id:

XP_038485696 ⟸ XM_038629768

RefSeq Acc Id:

XP_038485695 ⟸ XM_038629767

RefSeq Acc Id:

XP_038485697 ⟸ XM_038629769

RefSeq Acc Id:

XP_038485698 ⟸ XM_038629770

RefSeq Acc Id:	XP_038282848 ⟸ XM_038426920
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038282847 ⟸ XM_038426919
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038282849 ⟸ XM_038426921
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038282850 ⟸ XM_038426922
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311318 ⟸ XM_038455390
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311319 ⟸ XM_038455391
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311320 ⟸ XM_038455392
- UniProtKB:	A0A8C0Z543 (UniProtKB/TrEMBL), A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421561 ⟸ XM_038565633
- UniProtKB:	A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8C0Z543 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421560 ⟸ XM_038565632
- UniProtKB:	A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8C0Z543 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421562 ⟸ XM_038565634
- UniProtKB:	A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8C0Z543 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421563 ⟸ XM_038565635
- UniProtKB:	A0A8C0K3A4 (UniProtKB/TrEMBL), A0A8C0Z543 (UniProtKB/TrEMBL), A0A8I3MSX9 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845009156 ⟸ ENSCAFT00845011727

Ensembl Acc Id:

ENSCAFP00845009143 ⟸ ENSCAFT00845011712

Ensembl Acc Id:

ENSCAFP00845009163 ⟸ ENSCAFT00845011739

Protein Domains

G-protein coupled receptors family 1 profile

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000005023	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030004714	UniProtKB/TrEMBL
	ENSCAFG00040023021	UniProtKB/TrEMBL
	ENSCAFG00845006605	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000008071.5	UniProtKB/TrEMBL
	ENSCAFT00000098949.1	UniProtKB/TrEMBL
	ENSCAFT00000101375.1	UniProtKB/TrEMBL
	ENSCAFT00030008652.1	UniProtKB/TrEMBL
	ENSCAFT00040042785.1	UniProtKB/TrEMBL
	ENSCAFT00845011712	ENTREZGENE
	ENSCAFT00845011712.1	UniProtKB/TrEMBL
	ENSCAFT00845011727	ENTREZGENE
	ENSCAFT00845011727.1	UniProtKB/TrEMBL
	ENSCAFT00845011739	ENTREZGENE
	ENSCAFT00845011739.1	UniProtKB/TrEMBL
Gene3D-CATH	Rhodopsin 7-helix transmembrane proteins	UniProtKB/TrEMBL
InterPro	GPCR_Rhodpsn	UniProtKB/TrEMBL
	GPCR_Rhodpsn_7TM	UniProtKB/TrEMBL
	Histamine_H1_rcpt	UniProtKB/TrEMBL
KEGG Report	cfa:403813	UniProtKB/TrEMBL
NCBI Gene	HRH1	ENTREZGENE
PANTHER	5-HYDROXYTRYPTAMINE RECEPTOR	UniProtKB/TrEMBL
	HISTAMINE H1 RECEPTOR	UniProtKB/TrEMBL
Pfam	7tm_1	UniProtKB/TrEMBL
PRINTS	GPCRRHODOPSN	UniProtKB/TrEMBL
	HISTAMINEH1R	UniProtKB/TrEMBL
PROSITE	G_PROTEIN_RECEP_F1_1	UniProtKB/TrEMBL
	G_PROTEIN_RECEP_F1_2	UniProtKB/TrEMBL
SMART	7TM_GPCR_Srsx	UniProtKB/TrEMBL
Superfamily-SCOP	Family A G protein-coupled receptor-like	UniProtKB/TrEMBL
UniProt	A0A8C0K3A4	ENTREZGENE
	A0A8C0Z543	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3MSX9	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41786	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD