BCAS1 (brain enriched myelin associated protein 1) - Rat Genome Database

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Gene: BCAS1 (brain enriched myelin associated protein 1) Canis lupus familiaris
Analyze
Symbol: BCAS1
Name: brain enriched myelin associated protein 1
RGD ID: 12339378
Description: INVOLVED IN myelination (inferred); ASSOCIATED WITH Familial Prostate Cancer (ortholog); genetic disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: breast carcinoma amplified sequence 1; breast carcinoma-amplified sequence 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12439,702,242 - 39,799,787 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2438,948,017 - 39,045,353 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02440,414,597 - 40,512,333 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12439,650,765 - 39,748,311 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02439,786,034 - 39,883,711 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02440,368,393 - 40,466,014 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
myelination  (IEA)

Cellular Component
cytoplasm  (ISO)
synapse  (ISO)

Molecular Function

References
Additional References at PubMed
PMID:30032202   PMID:37756605  


Genomics

Comparative Map Data
BCAS1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12439,702,242 - 39,799,787 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2438,948,017 - 39,045,353 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02440,414,597 - 40,512,333 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12439,650,765 - 39,748,311 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02439,786,034 - 39,883,711 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02440,368,393 - 40,466,014 (-)NCBIUU_Cfam_GSD_1.0
BCAS1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382053,943,541 - 54,070,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2053,936,777 - 54,070,594 (-)EnsemblGRCh38hg38GRCh38
GRCh372052,560,080 - 52,687,133 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362051,993,924 - 52,120,490 (-)NCBINCBI36Build 36hg18NCBI36
Build 342051,993,923 - 52,120,490NCBI
Celera2049,264,729 - 49,391,950 (-)NCBICelera
Cytogenetic Map20q13.2NCBI
HuRef2049,306,639 - 49,433,877 (-)NCBIHuRef
CHM1_12052,463,305 - 52,590,487 (-)NCBICHM1_1
T2T-CHM13v2.02055,717,036 - 55,844,502 (-)NCBIT2T-CHM13v2.0
Bcas1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392170,188,911 - 170,270,292 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2170,188,911 - 170,269,765 (-)EnsemblGRCm39 Ensembl
GRCm382170,343,973 - 170,427,911 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2170,346,991 - 170,427,845 (-)EnsemblGRCm38mm10GRCm38
MGSCv372170,172,491 - 170,253,345 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362170,038,353 - 170,119,033 (-)NCBIMGSCv36mm8
Celera2176,300,838 - 176,381,866 (-)NCBICelera
Cytogenetic Map2H3NCBI
cM Map291.41NCBI
Bcas1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83179,554,754 - 179,637,800 (-)NCBIGRCr8
mRatBN7.23159,136,077 - 159,219,072 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3159,136,083 - 159,219,106 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3162,936,261 - 163,011,272 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03171,435,535 - 171,510,911 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03169,177,129 - 169,252,136 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03167,957,994 - 168,033,462 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3167,957,994 - 168,033,457 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03174,061,259 - 174,143,949 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43161,395,062 - 161,475,655 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13161,301,379 - 161,363,959 (-)NCBI
Celera3157,679,729 - 157,755,458 (-)NCBICelera
Cytogenetic Map3q42NCBI
Bcas1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554454,951,433 - 5,055,238 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554454,951,645 - 5,049,925 (+)NCBIChiLan1.0ChiLan1.0
BCAS1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22159,695,796 - 59,811,187 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12059,688,917 - 59,804,308 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02050,289,582 - 50,375,287 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12051,512,049 - 51,639,255 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2051,509,978 - 51,639,255 (-)Ensemblpanpan1.1panPan2
Bcas1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640186,093,188 - 186,184,931 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365141,561,848 - 1,638,722 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365141,546,833 - 1,634,269 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BCAS1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1754,920,712 - 55,039,346 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11754,920,714 - 55,039,470 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21761,650,565 - 61,658,234 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21761,712,035 - 61,809,255 (-)NCBISscrofa10.2Sscrofa10.2susScr3
BCAS1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.129,972,244 - 10,098,126 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl29,972,433 - 10,096,747 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605058,104,958 - 58,218,708 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Bcas1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247902,294,457 - 2,385,954 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247902,285,607 - 2,385,582 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in BCAS1
1859 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 3 6 12 8
Low 2 5 6 5 9 2
Below cutoff 5 8 3 3 1 6 1 3

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014107156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014107157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408921 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408922 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408923 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408924 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022408925 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038434120 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038457773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038457774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038509289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038572629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038636897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038636898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038636899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038636900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038636901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000063 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000018776   ⟹   ENSCAFP00000017396
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,703,099 - 39,785,205 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000018783   ⟹   ENSCAFP00000017403
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000018789   ⟹   ENSCAFP00000017409
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000055529   ⟹   ENSCAFP00000050408
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,993 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000063370   ⟹   ENSCAFP00000063869
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,703,099 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000069105   ⟹   ENSCAFP00000050815
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000071424   ⟹   ENSCAFP00000052061
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000088551   ⟹   ENSCAFP00000048178
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,993 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000093762   ⟹   ENSCAFP00000056544
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2439,699,931 - 39,800,185 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050568   ⟹   ENSCAFP00845039644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050647   ⟹   ENSCAFP00845039703
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050713   ⟹   ENSCAFP00845039755
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050771   ⟹   ENSCAFP00845039803
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050822   ⟹   ENSCAFP00845039841
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,408,542 - 40,512,738 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050892   ⟹   ENSCAFP00845039898
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,412,261 - 40,500,182 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845050959   ⟹   ENSCAFP00845039949
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,412,261 - 40,498,007 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845051002   ⟹   ENSCAFP00845039981
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,412,261 - 40,455,831 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845051056   ⟹   ENSCAFP00845040025
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2440,414,598 - 40,512,738 (-)Ensembl
RefSeq Acc Id: XM_014107156   ⟹   XP_013962631
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12439,702,242 - 39,799,787 (-)NCBI
Dog10K_Boxer_Tasha2438,948,017 - 39,045,353 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022408921   ⟹   XP_022264629
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12439,702,242 - 39,799,547 (-)NCBI
Dog10K_Boxer_Tasha2438,948,017 - 39,045,333 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022408925   ⟹   XP_022264633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12439,702,242 - 39,799,539 (-)NCBI
Dog10K_Boxer_Tasha2438,948,017 - 39,045,239 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038434115   ⟹   XP_038290043
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02440,414,597 - 40,500,182 (-)NCBI
RefSeq Acc Id: XM_038434116   ⟹   XP_038290044
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02440,414,597 - 40,500,182 (-)NCBI
RefSeq Acc Id: XM_038434117   ⟹   XP_038290045
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02440,414,597 - 40,512,333 (-)NCBI
RefSeq Acc Id: XM_038434119   ⟹   XP_038290047
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02440,414,597 - 40,500,182 (-)NCBI
RefSeq Acc Id: XM_038434120   ⟹   XP_038290048
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02440,414,597 - 40,500,182 (-)NCBI
RefSeq Acc Id: XM_038457773   ⟹   XP_038313701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2438,948,017 - 39,045,329 (-)NCBI
RefSeq Acc Id: XM_038457774   ⟹   XP_038313702
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2438,948,017 - 39,045,321 (-)NCBI
RefSeq Acc Id: XM_038509289   ⟹   XP_038365217
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12439,650,765 - 39,748,311 (-)NCBI
RefSeq Acc Id: XM_038572625   ⟹   XP_038428553
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02440,368,393 - 40,465,994 (-)NCBI
RefSeq Acc Id: XM_038572626   ⟹   XP_038428554
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02440,368,393 - 40,465,990 (-)NCBI
RefSeq Acc Id: XM_038572627   ⟹   XP_038428555
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02440,368,393 - 40,466,014 (-)NCBI
RefSeq Acc Id: XM_038572628   ⟹   XP_038428556
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02440,368,393 - 40,465,901 (-)NCBI
RefSeq Acc Id: XM_038572629   ⟹   XP_038428557
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02440,368,393 - 40,465,982 (-)NCBI
RefSeq Acc Id: XM_038636897   ⟹   XP_038492825
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02439,786,034 - 39,883,689 (-)NCBI
RefSeq Acc Id: XM_038636898   ⟹   XP_038492826
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02439,786,034 - 39,883,687 (-)NCBI
RefSeq Acc Id: XM_038636899   ⟹   XP_038492827
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02439,786,034 - 39,883,711 (-)NCBI
RefSeq Acc Id: XM_038636900   ⟹   XP_038492828
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02439,786,034 - 39,883,597 (-)NCBI
RefSeq Acc Id: XM_038636901   ⟹   XP_038492829
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02439,786,034 - 39,883,679 (-)NCBI
Protein Sequences
Protein RefSeqs XP_013962631 (Get FASTA)   NCBI Sequence Viewer  
  XP_022264629 (Get FASTA)   NCBI Sequence Viewer  
  XP_022264633 (Get FASTA)   NCBI Sequence Viewer  
  XP_038290043 (Get FASTA)   NCBI Sequence Viewer  
  XP_038290044 (Get FASTA)   NCBI Sequence Viewer  
  XP_038290045 (Get FASTA)   NCBI Sequence Viewer  
  XP_038290047 (Get FASTA)   NCBI Sequence Viewer  
  XP_038290048 (Get FASTA)   NCBI Sequence Viewer  
  XP_038313701 (Get FASTA)   NCBI Sequence Viewer  
  XP_038313702 (Get FASTA)   NCBI Sequence Viewer  
  XP_038365217 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428553 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428554 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428555 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428556 (Get FASTA)   NCBI Sequence Viewer  
  XP_038428557 (Get FASTA)   NCBI Sequence Viewer  
  XP_038492825 (Get FASTA)   NCBI Sequence Viewer  
  XP_038492826 (Get FASTA)   NCBI Sequence Viewer  
  XP_038492827 (Get FASTA)   NCBI Sequence Viewer  
  XP_038492828 (Get FASTA)   NCBI Sequence Viewer  
  XP_038492829 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000017396.5
  ENSCAFP00000017403.5
  ENSCAFP00000017409.5
  ENSCAFP00000048178.2
  ENSCAFP00000050408.2
  ENSCAFP00000050815.2
  ENSCAFP00000052061.1
  ENSCAFP00000056544.2
  ENSCAFP00030040212.1
  ENSCAFP00030040298.1
  ENSCAFP00030040451.1
  ENSCAFP00845039644
  ENSCAFP00845039644.1
  ENSCAFP00845039703
  ENSCAFP00845039703.1
  ENSCAFP00845039755.1
  ENSCAFP00845039803.1
  ENSCAFP00845039841.1
  ENSCAFP00845039898
  ENSCAFP00845039898.1
  ENSCAFP00845039949
  ENSCAFP00845039949.1
  ENSCAFP00845039981.1
  ENSCAFP00845040025
  ENSCAFP00845040025.1
RefSeq Acc Id: XP_013962631   ⟸   XM_014107156
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PK33 (UniProtKB/TrEMBL),   A0A8P0T4Q4 (UniProtKB/TrEMBL),   A0A8P0SGI5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022264629   ⟸   XM_022408921
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PEB4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022264633   ⟸   XM_022408925
- Peptide Label: isoform X4
- UniProtKB: A0A8P0P071 (UniProtKB/TrEMBL),   A0A8I3SBV4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000048178   ⟸   ENSCAFT00000088551
RefSeq Acc Id: ENSCAFP00000050815   ⟸   ENSCAFT00000069105
RefSeq Acc Id: ENSCAFP00000017396   ⟸   ENSCAFT00000018776
RefSeq Acc Id: ENSCAFP00000017409   ⟸   ENSCAFT00000018789
RefSeq Acc Id: ENSCAFP00000017403   ⟸   ENSCAFT00000018783
RefSeq Acc Id: ENSCAFP00000063869   ⟸   ENSCAFT00000063370
RefSeq Acc Id: ENSCAFP00000056544   ⟸   ENSCAFT00000093762
RefSeq Acc Id: ENSCAFP00000050408   ⟸   ENSCAFT00000055529
RefSeq Acc Id: ENSCAFP00000052061   ⟸   ENSCAFT00000071424
RefSeq Acc Id: XP_038365217   ⟸   XM_038509289
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038492827   ⟸   XM_038636899
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038492825   ⟸   XM_038636897
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038492826   ⟸   XM_038636898
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038492829   ⟸   XM_038636901
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038492828   ⟸   XM_038636900
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038290045   ⟸   XM_038434117
- Peptide Label: isoform X3
- UniProtKB: A0A8I3QQE6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038290048   ⟸   XM_038434120
- Peptide Label: isoform X5
- UniProtKB: A0A8P0P071 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038290047   ⟸   XM_038434119
- Peptide Label: isoform X4
- UniProtKB: A0A8P0P071 (UniProtKB/TrEMBL),   A0A8I3SBV4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038290044   ⟸   XM_038434116
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PQN0 (UniProtKB/TrEMBL),   A0A8P0T118 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038290043   ⟸   XM_038434115
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PEB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038313701   ⟸   XM_038457773
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PQN0 (UniProtKB/TrEMBL),   A0A8P0T118 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038313702   ⟸   XM_038457774
- Peptide Label: isoform X5
- UniProtKB: A0A8P0P071 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428555   ⟸   XM_038572627
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PK33 (UniProtKB/TrEMBL),   A0A8P0SGI5 (UniProtKB/TrEMBL),   A0A8P0T4Q4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428553   ⟸   XM_038572625
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PEB4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428554   ⟸   XM_038572626
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PQN0 (UniProtKB/TrEMBL),   A0A8P0T118 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428557   ⟸   XM_038572629
- Peptide Label: isoform X5
- UniProtKB: A0A8P0P071 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038428556   ⟸   XM_038572628
- Peptide Label: isoform X4
- UniProtKB: A0A8I3SBV4 (UniProtKB/TrEMBL),   A0A8P0P071 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845039898   ⟸   ENSCAFT00845050892
RefSeq Acc Id: ENSCAFP00845039644   ⟸   ENSCAFT00845050568
RefSeq Acc Id: ENSCAFP00845039981   ⟸   ENSCAFT00845051002
RefSeq Acc Id: ENSCAFP00845039949   ⟸   ENSCAFT00845050959
RefSeq Acc Id: ENSCAFP00845039803   ⟸   ENSCAFT00845050771
RefSeq Acc Id: ENSCAFP00845039755   ⟸   ENSCAFT00845050713
RefSeq Acc Id: ENSCAFP00845039841   ⟸   ENSCAFT00845050822
RefSeq Acc Id: ENSCAFP00845039703   ⟸   ENSCAFT00845050647
RefSeq Acc Id: ENSCAFP00845040025   ⟸   ENSCAFT00845051056


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000011825 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030024850 UniProtKB/TrEMBL
  ENSCAFG00845028476 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000018776.6 UniProtKB/TrEMBL
  ENSCAFT00000018783.5 UniProtKB/TrEMBL
  ENSCAFT00000018789.6 UniProtKB/TrEMBL
  ENSCAFT00000055529.3 UniProtKB/TrEMBL
  ENSCAFT00000069105.2 UniProtKB/TrEMBL
  ENSCAFT00000071424.2 UniProtKB/TrEMBL
  ENSCAFT00000088551.2 UniProtKB/TrEMBL
  ENSCAFT00000093762.2 UniProtKB/TrEMBL
  ENSCAFT00030046025.1 UniProtKB/TrEMBL
  ENSCAFT00030046130.1 UniProtKB/TrEMBL
  ENSCAFT00030046294.1 UniProtKB/TrEMBL
  ENSCAFT00845050568 ENTREZGENE
  ENSCAFT00845050568.1 UniProtKB/TrEMBL
  ENSCAFT00845050647 ENTREZGENE
  ENSCAFT00845050647.1 UniProtKB/TrEMBL
  ENSCAFT00845050713.1 UniProtKB/TrEMBL
  ENSCAFT00845050771.1 UniProtKB/TrEMBL
  ENSCAFT00845050822.1 UniProtKB/TrEMBL
  ENSCAFT00845050892 ENTREZGENE
  ENSCAFT00845050892.1 UniProtKB/TrEMBL
  ENSCAFT00845050959 ENTREZGENE
  ENSCAFT00845050959.1 UniProtKB/TrEMBL
  ENSCAFT00845051002.1 UniProtKB/TrEMBL
  ENSCAFT00845051056 ENTREZGENE
  ENSCAFT00845051056.1 UniProtKB/TrEMBL
InterPro NABC1 UniProtKB/TrEMBL
KEGG Report cfa:611661 UniProtKB/TrEMBL
NCBI Gene BCAS1 ENTREZGENE
PANTHER BREAST CARCINOMA-AMPLIFIED SEQUENCE 1 UniProtKB/TrEMBL
  PTHR15016 UniProtKB/TrEMBL
UniProt A0A8C0PEB4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PK33 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PQN0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PY02_CANLF UniProtKB/TrEMBL
  A0A8I3PYA0_CANLF UniProtKB/TrEMBL
  A0A8I3Q1B7_CANLF UniProtKB/TrEMBL
  A0A8I3Q1V2_CANLF UniProtKB/TrEMBL
  A0A8I3Q4H2_CANLF UniProtKB/TrEMBL
  A0A8I3Q4N4_CANLF UniProtKB/TrEMBL
  A0A8I3QPT9_CANLF UniProtKB/TrEMBL
  A0A8I3QQE6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3SBV4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NDU1_CANLF UniProtKB/TrEMBL
  A0A8P0NE05_CANLF UniProtKB/TrEMBL
  A0A8P0P071 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P0L8_CANLF UniProtKB/TrEMBL
  A0A8P0P5U9_CANLF UniProtKB/TrEMBL
  A0A8P0SGI5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T118 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T4Q4 ENTREZGENE
UniProt Secondary A0A8P0T4Q4 UniProtKB/TrEMBL
VGNC ID VGNC:98867 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2020-03-10 BCAS1  brain enriched myelin associated protein 1  BCAS1  breast carcinoma amplified sequence 1  Symbol and/or name change 5135510 APPROVED