SPHK2 (sphingosine kinase 2) - Rat Genome Database

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Gene: SPHK2 (sphingosine kinase 2) Canis lupus familiaris
Analyze
Symbol: SPHK2
Name: sphingosine kinase 2
RGD ID: 12337199
Description: ENCODES a protein that exhibits ATP binding (inferred); D-erythro-sphingosine kinase activity (inferred); histone binding (inferred); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); cell population proliferation (ortholog); PARTICIPATES IN ceramide signaling pathway; Fabry disease pathway; Gaucher's disease pathway; ASSOCIATED WITH genetic disease (ortholog); Memory Disorders (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); endoplasmic reticulum (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,681,425 - 107,689,790 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,680,599 - 107,689,707 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,202,917 - 107,211,393 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,205,468 - 108,213,966 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,205,468 - 108,212,765 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,872,017 - 107,880,502 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,519,318 - 107,527,797 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,355,012 - 108,363,506 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202   PMID:33454434  


Genomics

Comparative Map Data
SPHK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,681,425 - 107,689,790 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,680,599 - 107,689,707 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,202,917 - 107,211,393 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,205,468 - 108,213,966 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,205,468 - 108,212,765 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,872,017 - 107,880,502 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,519,318 - 107,527,797 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,355,012 - 108,363,506 (-)NCBIUU_Cfam_GSD_1.0
SPHK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,619,506 - 48,630,405 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,619,291 - 48,630,717 (+)EnsemblGRCh38hg38GRCh38
GRCh371949,122,763 - 49,133,662 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,814,360 - 53,825,474 (+)NCBINCBI36Build 36hg18NCBI36
Build 341953,814,359 - 53,825,473NCBI
Celera1945,987,413 - 45,998,527 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,501,739 - 45,513,199 (+)NCBIHuRef
CHM1_11949,124,423 - 49,135,537 (+)NCBICHM1_1
T2T-CHM13v2.01951,613,990 - 51,624,887 (+)NCBIT2T-CHM13v2.0
Sphk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,358,887 - 45,367,426 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,358,891 - 45,367,426 (-)EnsemblGRCm39 Ensembl
GRCm38745,709,463 - 45,718,002 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,709,467 - 45,718,002 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,964,833 - 52,973,372 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,578,303 - 45,585,957 (-)NCBIMGSCv36mm8
Celera741,172,020 - 41,180,543 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.45NCBI
Sphk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,317,332 - 105,324,985 (-)NCBIGRCr8
mRatBN7.2196,180,872 - 96,188,592 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,180,887 - 96,188,391 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,566,308 - 101,570,613 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01110,039,006 - 110,043,311 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,329,383 - 103,333,688 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,692,972 - 101,700,604 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,692,973 - 101,697,277 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,771,785 - 102,779,436 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,178,615 - 96,182,920 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,256,726 - 96,261,031 (-)NCBI
Celera190,434,071 - 90,438,377 (-)NCBICelera
Cytogenetic Map1q22NCBI
Sphk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,917,301 - 1,928,493 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,921,479 - 1,929,450 (-)NCBIChiLan1.0ChiLan1.0
SPHK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,725,763 - 54,735,466 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,652,115 - 56,661,802 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,620,980 - 45,631,786 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11954,213,166 - 54,224,033 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1954,213,166 - 54,224,767 (+)Ensemblpanpan1.1panPan2
Sphk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,050,633 - 21,058,418 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,669,920 - 2,676,587 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,668,708 - 2,676,608 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SPHK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl653,979,012 - 53,986,768 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1653,982,911 - 53,986,779 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,726,086 - 49,734,104 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SPHK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,865,921 - 41,881,889 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,867,139 - 41,881,268 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,738,797 - 21,749,747 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sphk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248325,246,895 - 5,253,207 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248325,246,328 - 5,254,247 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SPHK2
82 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 22 6 3 6 6 12 8 9 5
Low 1 5 3 6 1 1
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005616344 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005616348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005616349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119143 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119144 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014119152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022424257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022424263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022424270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467638 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038467644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528353 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528356 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528357 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038528358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592647 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038592648 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656429 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656430 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656431 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656433 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038656438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038680590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000006365   ⟹   ENSCAFP00000005895
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1107,680,599 - 107,686,537 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000044690   ⟹   ENSCAFP00000039229
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1107,680,599 - 107,689,707 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000085696   ⟹   ENSCAFP00000062645
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1107,682,055 - 107,687,487 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845001631   ⟹   ENSCAFP00845001289
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1108,205,468 - 108,211,331 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845001644   ⟹   ENSCAFP00845001297
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1108,205,479 - 108,212,765 (-)Ensembl
RefSeq Acc Id: XM_005616344   ⟹   XP_005616401
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,687,135 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,208,483 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005616348   ⟹   XP_005616405
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,687,144 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,208,622 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005616349   ⟹   XP_005616406
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,687,275 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,208,769 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014119144   ⟹   XP_013974619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,689,790 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,211,393 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014119152   ⟹   XP_013974627
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,689,783 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,211,388 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022424257   ⟹   XP_022279965
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,689,786 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,211,393 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022424263   ⟹   XP_022279971
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,689,621 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,211,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022424270   ⟹   XP_022279978
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11107,681,425 - 107,689,621 (-)NCBI
Dog10K_Boxer_Tasha1107,202,917 - 107,211,124 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038467635   ⟹   XP_038323563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,877,588 (-)NCBI
RefSeq Acc Id: XM_038467636   ⟹   XP_038323564
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,502 (-)NCBI
RefSeq Acc Id: XM_038467637   ⟹   XP_038323565
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,229 (-)NCBI
RefSeq Acc Id: XM_038467638   ⟹   XP_038323566
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,229 (-)NCBI
RefSeq Acc Id: XM_038467639   ⟹   XP_038323567
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,502 (-)NCBI
RefSeq Acc Id: XM_038467640   ⟹   XP_038323568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,229 (-)NCBI
RefSeq Acc Id: XM_038467641   ⟹   XP_038323569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,229 (-)NCBI
RefSeq Acc Id: XM_038467642   ⟹   XP_038323570
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,877,727 (-)NCBI
RefSeq Acc Id: XM_038467643   ⟹   XP_038323571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,877,874 (-)NCBI
RefSeq Acc Id: XM_038467644   ⟹   XP_038323572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.11107,872,017 - 107,880,499 (-)NCBI
RefSeq Acc Id: XM_038528349   ⟹   XP_038384277
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,360,592 (-)NCBI
RefSeq Acc Id: XM_038528350   ⟹   XP_038384278
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,506 (-)NCBI
RefSeq Acc Id: XM_038528351   ⟹   XP_038384279
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,233 (-)NCBI
RefSeq Acc Id: XM_038528352   ⟹   XP_038384280
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,233 (-)NCBI
RefSeq Acc Id: XM_038528353   ⟹   XP_038384281
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,506 (-)NCBI
RefSeq Acc Id: XM_038528354   ⟹   XP_038384282
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,233 (-)NCBI
RefSeq Acc Id: XM_038528355   ⟹   XP_038384283
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,233 (-)NCBI
RefSeq Acc Id: XM_038528356   ⟹   XP_038384284
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,360,731 (-)NCBI
RefSeq Acc Id: XM_038528357   ⟹   XP_038384285
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,360,878 (-)NCBI
RefSeq Acc Id: XM_038528358   ⟹   XP_038384286
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.01108,355,012 - 108,363,503 (-)NCBI
RefSeq Acc Id: XM_038592639   ⟹   XP_038448567
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,524,883 (-)NCBI
RefSeq Acc Id: XM_038592640   ⟹   XP_038448568
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,797 (-)NCBI
RefSeq Acc Id: XM_038592641   ⟹   XP_038448569
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,524 (-)NCBI
RefSeq Acc Id: XM_038592642   ⟹   XP_038448570
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,524 (-)NCBI
RefSeq Acc Id: XM_038592643   ⟹   XP_038448571
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,797 (-)NCBI
RefSeq Acc Id: XM_038592644   ⟹   XP_038448572
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,524 (-)NCBI
RefSeq Acc Id: XM_038592645   ⟹   XP_038448573
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,524 (-)NCBI
RefSeq Acc Id: XM_038592646   ⟹   XP_038448574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,525,022 (-)NCBI
RefSeq Acc Id: XM_038592647   ⟹   XP_038448575
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,525,169 (-)NCBI
RefSeq Acc Id: XM_038592648   ⟹   XP_038448576
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.01107,519,318 - 107,527,794 (-)NCBI
RefSeq Acc Id: XM_038656429   ⟹   XP_038512357
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,211,052 (-)NCBI
RefSeq Acc Id: XM_038656430   ⟹   XP_038512358
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,966 (-)NCBI
RefSeq Acc Id: XM_038656431   ⟹   XP_038512359
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,693 (-)NCBI
RefSeq Acc Id: XM_038656432   ⟹   XP_038512360
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,693 (-)NCBI
RefSeq Acc Id: XM_038656433   ⟹   XP_038512361
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,966 (-)NCBI
RefSeq Acc Id: XM_038656434   ⟹   XP_038512362
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,693 (-)NCBI
RefSeq Acc Id: XM_038656435   ⟹   XP_038512363
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,693 (-)NCBI
RefSeq Acc Id: XM_038656436   ⟹   XP_038512364
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,211,191 (-)NCBI
RefSeq Acc Id: XM_038656437   ⟹   XP_038512365
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,211,338 (-)NCBI
RefSeq Acc Id: XM_038656438   ⟹   XP_038512366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.01108,205,468 - 108,213,963 (-)NCBI
RefSeq Acc Id: XM_038680590   ⟹   XP_038536518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha1107,202,917 - 107,211,124 (-)NCBI
Protein Sequences
Protein RefSeqs XP_005616401 (Get FASTA)   NCBI Sequence Viewer  
  XP_005616405 (Get FASTA)   NCBI Sequence Viewer  
  XP_005616406 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974619 (Get FASTA)   NCBI Sequence Viewer  
  XP_013974627 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279965 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279971 (Get FASTA)   NCBI Sequence Viewer  
  XP_022279978 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323563 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323564 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323565 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323566 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323569 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323570 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323571 (Get FASTA)   NCBI Sequence Viewer  
  XP_038323572 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384277 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384278 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384279 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384280 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384281 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384282 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384283 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384284 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384285 (Get FASTA)   NCBI Sequence Viewer  
  XP_038384286 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448567 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448568 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448569 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448570 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448571 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448572 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448573 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448574 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448575 (Get FASTA)   NCBI Sequence Viewer  
  XP_038448576 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512357 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512358 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512359 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512360 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512361 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512362 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512363 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512364 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038512366 (Get FASTA)   NCBI Sequence Viewer  
  XP_038536518 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000005895.5
  ENSCAFP00000039229.3
  ENSCAFP00030020479.1
  ENSCAFP00030020522.1
  ENSCAFP00030020567.1
  ENSCAFP00040001757.1
  ENSCAFP00040001765.1
  ENSCAFP00040001786.1
  ENSCAFP00040001799.1
  ENSCAFP00845001289
  ENSCAFP00845001289.1
  ENSCAFP00845001297
  ENSCAFP00845001297.1
RefSeq Acc Id: XP_013974627   ⟸   XM_014119152
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_013974619   ⟸   XM_014119144
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616406   ⟸   XM_005616349
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LLY8 (UniProtKB/TrEMBL),   A0A8C0LRH9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616405   ⟸   XM_005616348
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616401   ⟸   XM_005616344
- Peptide Label: isoform X1
- UniProtKB: A0A8I3MH69 (UniProtKB/TrEMBL),   A0A8P0S9M6 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279965   ⟸   XM_022424257
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279978   ⟸   XM_022424270
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022279971   ⟸   XM_022424263
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000005895   ⟸   ENSCAFT00000006365
RefSeq Acc Id: ENSCAFP00000039229   ⟸   ENSCAFT00000044690
RefSeq Acc Id: ENSCAFP00000062645   ⟸   ENSCAFT00000085696
RefSeq Acc Id: XP_038323567   ⟸   XM_038467639
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323564   ⟸   XM_038467636
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323572   ⟸   XM_038467644
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038323568   ⟸   XM_038467640
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323565   ⟸   XM_038467637
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323569   ⟸   XM_038467641
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323566   ⟸   XM_038467638
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038323571   ⟸   XM_038467643
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038323570   ⟸   XM_038467642
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038323563   ⟸   XM_038467635
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038448571   ⟸   XM_038592643
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448568   ⟸   XM_038592640
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448576   ⟸   XM_038592648
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038448572   ⟸   XM_038592644
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448569   ⟸   XM_038592641
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448573   ⟸   XM_038592645
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448570   ⟸   XM_038592642
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038448575   ⟸   XM_038592647
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038448574   ⟸   XM_038592646
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038448567   ⟸   XM_038592639
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038512361   ⟸   XM_038656433
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512358   ⟸   XM_038656430
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512366   ⟸   XM_038656438
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038512362   ⟸   XM_038656434
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512359   ⟸   XM_038656431
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512363   ⟸   XM_038656435
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512360   ⟸   XM_038656432
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512365   ⟸   XM_038656437
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LLY8 (UniProtKB/TrEMBL),   A0A8C0LRH9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512364   ⟸   XM_038656436
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038512357   ⟸   XM_038656429
- Peptide Label: isoform X1
- UniProtKB: A0A8I3MH69 (UniProtKB/TrEMBL),   A0A8P0S9M6 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038536518   ⟸   XM_038680590
- Peptide Label: isoform X2
- UniProtKB: A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL),   A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384281   ⟸   XM_038528353
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384278   ⟸   XM_038528350
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384286   ⟸   XM_038528358
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038384282   ⟸   XM_038528354
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384279   ⟸   XM_038528351
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384283   ⟸   XM_038528355
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384280   ⟸   XM_038528352
- Peptide Label: isoform X2
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8C0RV87 (UniProtKB/TrEMBL),   A0A8I3MJ65 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384285   ⟸   XM_038528357
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LLY8 (UniProtKB/TrEMBL),   A0A8C0LRH9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384284   ⟸   XM_038528356
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038384277   ⟸   XM_038528349
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N5J3 (UniProtKB/TrEMBL),   A0A8I3MH69 (UniProtKB/TrEMBL),   A0A8P0S9M6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845001289   ⟸   ENSCAFT00845001631
RefSeq Acc Id: ENSCAFP00845001297   ⟸   ENSCAFT00845001644
Protein Domains
DAGKc


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003961 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012684 UniProtKB/TrEMBL
  ENSCAFG00040001103 UniProtKB/TrEMBL
  ENSCAFG00845000947 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000006365.5 UniProtKB/TrEMBL
  ENSCAFT00000044690.4 UniProtKB/TrEMBL
  ENSCAFT00030023492.1 UniProtKB/TrEMBL
  ENSCAFT00030023543.1 UniProtKB/TrEMBL
  ENSCAFT00030023597.1 UniProtKB/TrEMBL
  ENSCAFT00040002054.1 UniProtKB/TrEMBL
  ENSCAFT00040002068.1 UniProtKB/TrEMBL
  ENSCAFT00040002093.1 UniProtKB/TrEMBL
  ENSCAFT00040002109.1 UniProtKB/TrEMBL
  ENSCAFT00845001631 ENTREZGENE
  ENSCAFT00845001631.1 UniProtKB/TrEMBL
  ENSCAFT00845001644 ENTREZGENE
  ENSCAFT00845001644.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.200.40 UniProtKB/TrEMBL
InterPro ATP-NAD_kinase_N UniProtKB/TrEMBL
  Diacylglycerol_kinase_cat_dom UniProtKB/TrEMBL
  NAD/diacylglycerol_kinase_sf UniProtKB/TrEMBL
  YegS/DAGK_C UniProtKB/TrEMBL
KEGG Report cfa:484401 UniProtKB/TrEMBL
NCBI Gene SPHK2 ENTREZGENE
PANTHER SPHINGOSINE KINASE UniProtKB/TrEMBL
  SPHINGOSINE KINASE 2 UniProtKB/TrEMBL
Pfam DAGK_cat UniProtKB/TrEMBL
  YegS_C UniProtKB/TrEMBL
PROSITE DAGK UniProtKB/TrEMBL
SMART DAGKc UniProtKB/TrEMBL
Superfamily-SCOP SSF111331 UniProtKB/TrEMBL
UniProt A0A8C0LLY8 ENTREZGENE
  A0A8C0LRH9 ENTREZGENE
  A0A8C0N5J3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PNK0_CANLF UniProtKB/TrEMBL
  A0A8C0PNL0_CANLF UniProtKB/TrEMBL
  A0A8C0PUY4_CANLF UniProtKB/TrEMBL
  A0A8C0RIW4_CANLF UniProtKB/TrEMBL
  A0A8C0RV87 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MH69 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MJ65 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0S9M6 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:46737 ENTREZGENE