KRT6A (keratin 6A) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: KRT6A (keratin 6A) Canis lupus familiaris
Analyze
No known orthologs.
Symbol: KRT6A
Name: keratin 6A
RGD ID: 12335659
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: keratin 6B; keratin, type II cytoskeletal 6A; KRT6B
RGD Orthologs
Alliance Genes
More Info homologs ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1272,591,954 - 2,597,321 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2743,656,693 - 43,662,010 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0272,590,394 - 2,595,706 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1272,607,961 - 2,613,277 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0272,593,173 - 2,598,491 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02744,054,930 - 44,060,244 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Variants

.
Variants in KRT6A
146 total Variants

Expression


Sequence


RefSeq Acc Id: XM_003433512   ⟹   XP_003433560
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1272,591,954 - 2,597,321 (+)NCBI
Dog10K_Boxer_Tasha2743,656,693 - 43,662,010 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038437852   ⟹   XP_038293780
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0272,590,394 - 2,595,706 (+)NCBI
RefSeq Acc Id: XM_038512801   ⟹   XP_038368729
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1272,607,961 - 2,613,277 (+)NCBI
RefSeq Acc Id: XM_038576175   ⟹   XP_038432103
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02744,054,930 - 44,060,244 (-)NCBI
RefSeq Acc Id: XM_038640566   ⟹   XP_038496494
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0272,593,173 - 2,598,491 (+)NCBI
RefSeq Acc Id: XP_003433560   ⟸   XM_003433512
- UniProtKB: A0A8C0LCB2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_038368729   ⟸   XM_038512801
RefSeq Acc Id: XP_038496494   ⟸   XM_038640566
RefSeq Acc Id: XP_038293780   ⟸   XM_038437852
- UniProtKB: A0A8C0LCB2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038432103   ⟸   XM_038576175
- UniProtKB: A0A8C0LCB2 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
NCBI Gene KRT6B ENTREZGENE
UniProt A0A8C0LCB2 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-12 KRT6A  keratin 6A  KRT6B  keratin 6B  Symbol and/or name change 5135510 APPROVED