COMP (cartilage oligomeric matrix protein)

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Gene: COMP (cartilage oligomeric matrix protein) Canis lupus familiaris

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Symbol:

COMP

Name:

cartilage oligomeric matrix protein

RGD ID:

12333559

Description:

ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); fibronectin binding (ortholog); vitamin D binding (ortholog); INVOLVED IN apoptotic process (ortholog); artery morphogenesis (ortholog); blood coagulation (ortholog); ASSOCIATED WITH carpal tunnel syndrome 2 (ortholog); connective tissue disease (ortholog); genetic disease (ortholog); FOUND IN collagen-containing extracellular matrix (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,306,813 - 44,314,575 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,306,859 - 44,314,625 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	44,221,457 - 44,229,145 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,793,007 - 44,800,779 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,793,063 - 44,800,711 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	44,030,270 - 44,038,042 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,440,677 - 44,448,355 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,715,955 - 44,723,648 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

carpal tunnel syndrome 2 (ISO)

connective tissue disease (ISO)

genetic disease (ISO)

Joint Instability (ISO)

Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ISO)

multiple epiphyseal dysplasia (ISO)

multiple epiphyseal dysplasia 1 (ISO)

osteoarthritis (ISO)

Osteoarthritis, Hip (ISO)

osteochondrodysplasia (ISO)

progressive myoclonus epilepsy 8 (ISO)

pseudoachondroplasia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA,ISO)

artery morphogenesis (IEA,ISO)

blood coagulation (IEA,ISO)

BMP signaling pathway (IEA,ISO)

bone growth (IEA,ISO)

bone mineralization (IEA,ISO)

bone morphogenesis (IEA,ISO)

cartilage development (IEA,ISO)

cartilage homeostasis (IEA)

cell adhesion (IEA)

cellular senescence (IEA,ISO)

chondrocyte development (IEA,ISO)

chondrocyte proliferation (IEA,ISO)

collagen fibril organization (IEA,ISO)

endochondral bone growth (IEA,ISO)

growth plate cartilage development (IEA,ISO)

limb development (IEA,ISO)

multicellular organism growth (IEA,ISO)

muscle cell development (IEA,ISO)

musculoskeletal movement (IEA,ISO)

negative regulation of apoptotic process (IEA)

negative regulation of hemostasis (IEA,ISO)

neuromuscular process (IEA,ISO)

ossification (IEA,ISO)

platelet aggregation (IEA,ISO)

positive regulation of chondrocyte proliferation (IEA,ISO)

protein homooligomerization (IEA)

protein processing (IEA,ISO)

protein secretion (IEA,ISO)

regulation of bone mineralization (IEA,ISO)

regulation of gene expression (IEA,ISO)

response to unfolded protein (IEA,ISO)

skeletal system development (IEA,ISO)

skin development (IEA,ISO)

tendon development (IEA,ISO)

vascular associated smooth muscle cell development (IEA,ISO)

vascular associated smooth muscle contraction (IEA,ISO)

Cellular Component

collagen-containing extracellular matrix (ISO)

extracellular matrix (IEA)

extracellular region (IEA)

extracellular space (IEA)

protein-containing complex (IEA)

Molecular Function

BMP binding (IEA)

calcium ion binding (IEA)

collagen binding (IEA)

extracellular matrix structural constituent (ISO)

fibronectin binding (ISO)

heparan sulfate proteoglycan binding (IEA)

heparin binding (IEA)

integrin binding (IEA)

protease binding (IEA)

protein binding (ISO)

proteoglycan binding (IEA)

vitamin D binding (ISO)

References

Additional References at PubMed

PMID:17669022	PMID:20042950	PMID:22301074	PMID:22440362

Genomics

Comparative Map Data

COMP
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,306,813 - 44,314,575 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,306,859 - 44,314,625 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	44,221,457 - 44,229,145 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,793,007 - 44,800,779 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,793,063 - 44,800,711 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	44,030,270 - 44,038,042 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,440,677 - 44,448,355 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,715,955 - 44,723,648 (+)	NCBI		UU_Cfam_GSD_1.0

COMP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	18,782,773 - 18,791,305 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	18,782,773 - 18,791,305 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	18,893,583 - 18,902,114 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	18,754,583 - 18,763,114 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	18,754,583 - 18,763,114	NCBI
Celera	19	18,798,378 - 18,806,909 (-)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	18,458,025 - 18,466,569 (-)	NCBI		HuRef
CHM1_1	19	18,893,587 - 18,902,107 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	18,918,369 - 18,926,902 (-)	NCBI		T2T-CHM13v2.0

Comp
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,826,186 - 70,834,721 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,826,208 - 70,834,716 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	70,373,548 - 70,382,066 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,373,558 - 70,382,066 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	72,897,447 - 72,905,965 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	73,302,547 - 73,311,055 (+)	NCBI		MGSCv36	mm8
Celera	8	72,929,973 - 72,938,489 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.15	NCBI

Comp
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	19,081,172 - 19,089,548 (-)	NCBI		GRCr8
mRatBN7.2	16	19,047,206 - 19,055,584 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	19,047,207 - 19,055,845 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	19,086,958 - 19,095,161 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,219,417 - 20,227,820 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	19,139,921 - 19,148,124 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,798,437 - 20,807,070 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,798,437 - 20,807,070 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,647,382 - 20,657,932 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
Celera	16	19,237,609 - 19,245,998 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

COMP
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	23,643,332 - 23,652,510 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	22,651,519 - 22,661,150 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	18,222,270 - 18,230,936 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	19,229,420 - 19,238,053 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	19,229,562 - 19,238,008 (-)	Ensembl	panpan1.1		panPan2

Comp
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	202,995,236 - 203,002,126 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	2,544,389 - 2,551,164 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	2,544,389 - 2,551,155 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

COMP
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	59,061,426 - 59,069,564 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	59,061,409 - 59,068,951 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	58,815,756 - 58,823,293 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

COMP
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	17,246,617 - 17,255,561 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	17,246,762 - 17,255,126 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	2,070,833 - 2,079,420 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Comp
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	1,871,002 - 1,877,369 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	1,870,975 - 1,877,434 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in COMP
46 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038428109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038503767	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038566792	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038630933	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_533869	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000023228 ⟹ ENSCAFP00000021570

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,306,859 - 44,314,507 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000077038 ⟹ ENSCAFP00000049903

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,306,859 - 44,314,507 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000082068 ⟹ ENSCAFP00000055935

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,306,859 - 44,314,625 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035299 ⟹ ENSCAFP00845027630

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,793,063 - 44,800,711 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035455 ⟹ ENSCAFP00845027747

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,793,063 - 44,800,711 (+)	Ensembl

RefSeq Acc Id:

XM_038428109 ⟹ XP_038284037

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	44,793,007 - 44,800,779 (+)	NCBI

RefSeq Acc Id:

XM_038503767 ⟹ XP_038359695

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	44,030,270 - 44,038,042 (+)	NCBI

RefSeq Acc Id:

XM_038566792 ⟹ XP_038422720

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	44,715,955 - 44,723,648 (+)	NCBI

RefSeq Acc Id:

XM_038630933 ⟹ XP_038486861

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	44,440,677 - 44,448,355 (+)	NCBI

RefSeq Acc Id:

XM_533869 ⟹ XP_533869

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	44,306,813 - 44,314,575 (+)	NCBI
Dog10K_Boxer_Tasha	20	44,221,457 - 44,229,145 (+)	NCBI

Sequence:

show sequence

CGGATAAATAGGTCCCGCGGGCCTCGTGGGCAGCAGAAAGCGAGCTGCAGTCCAGCTCCCCGCC
GCCGCCATGGTTCCTGCCGCCGCCTGCGTTCTCCTGCTCACCCTGGCCGCCCTCGGCGTGTCGG
GTCAGGGCCAGATACCACTAGGTGCAGATCTAGGACCGCAGATGCTTCGGGAACTTCAGGAGAC
CAACGCGGCGCTGCAGGATGTGCGGGAGCTGTTGCGGCAGCAGGTCAAGGAGATCACGTTTCTG
AAAAACACAGTGATGGAGTGTGACGCGTGCGGGATGCAGCCCGCGCGCACCCCGGGGCTGAGCG
TGCGGCCCCTATCCCAGTGCGCGCCCGGCTTCTGCTACCCGGGCGTGGTCTGCACTCAGACCGC
AAGCGGCGCGCGCTGTGGCCCCTGCCCCGCGGGCTTCACCGGCAATGGCTCGCACTGCGTCGAC
GTCAACGAGTGCAACGCCCATCCCTGCTTCCCCCGCGTCCGCTGCATCAACACCAAACCCGGCT
TCCGCTGCGAGGCTTGCCCGCCGGGGTACAGCGGCCCCGCCCACGAGGGCGTGGGGCTGGCCTT
CGCCAAGGCCAACAAGCAGGTTTGCACGGACATTAACGAGTGTGAGACCGGGCAGCATAACTGC
GTCCCCAACTCCGTGTGCGTCAACACCCGGGGCTCCTTCCAGTGCGGCCCTTGCCAGCCCGGCT
TCGTGGGCGACCAGGCGTCTGGCTGCCAGCGGCGCTCGCAGCGCTTCTGCCCCGACGGCACGCC
CAGCCCGTGCCACGAGAAGGCCGACTGCATCCTGGAACGCGACGGCTCGCGATCGTGCGTGTGC
GCCGTTGGCTGGGCAGGCAACGGGCTCCTCTGCGGCCGAGACACGGATTTGGACGGCTTCCCCG
ACGAGAAGCTCCGCTGCTCAGAACGCCAGTGCCGTAAGGACAACTGTGTGACGGTGCCCAACTC
AGGGCAAGAGGACGTGGATCGCGACGGCATCGGAGACGCCTGCGACCCGGATGCTGATGGGGAC
GGGGTCCTCAACGAGCAGGACAACTGTAAGCTGGTGCGGAACCCAGACCAACGCAATGCGGACG
GCGACAAGTGGGGTGATGCTTGCGACAACTGCCGGTCCCAGAAGAACGACGACCAAAAGGACAC
AGATCAGGACGGCAAAGGCGACGCCTGCGACGACGACATCGACGGCGACCGGATACGAAATACG
GTGGACAACTGCCCAAGGGTACCCAACTCAGACCAGAAGGACAGTGATGGTGACGGTGTAGGAG
ATGCCTGTGACAACTGTCCCCAGAAAAGCAACGCAGACCAGAGGGATGTAGACCACGACTTTGT
GGGAGACGCTTGTGACAGCGACCAAGACCAGGATGGGGATGGGCACCAGGACTCACGGGACAAC
TGCCCTACAGTACCGAATAGTGCCCAGCAGGACTCAGACCACGATGGTCAGGGTGACGCCTGCG
ATGACGACGATGACAATGACGGAGTCCCCGACAGTCGGGACAACTGTCGTCTTGTGCCCAACCC
AAACCAGGAAGATGTAGACCGGGACGGTGTGGGCGATGCGTGCCAGGGCGACTTCGACGCGGAC
AAGGTGGTGGACAAGATTGATGTGTGTCCGGAGAATGCCGAGGTCACCCTCACCGACTTCCGGG
CCTTCCAGACTGTCGTACTGGACCCCGAGGGCGACGCGCAGATAGATCCCAACTGGGTGGTGCT
CAACCAGGGTATGGAGATCGTGCAGACCATGAACAGCGACCCTGGCCTGGCTGTGGGTTACACG
GCCTTCAATGGCGTGGACTTCGAAGGCACGTTCCACGTGAACACAGTCACAGATGATGACTATG
CTGGCTTCATCTTTGGCTACCAGGACAGCTCCAGCTTCTACGTGGTTATGTGGAAACAGATGGA
GCAGACATACTGGCAGGCGAATCCCTTCAGGGCCGTAGCTGAACCCGGCATTCAGCTCAAGGCT
GTGAAGTCCTCCACAGGCCCCGGGGAGCAGCTGCGGAATGCACTCTGGCACACAGGGGACACAG
CATCACAGGTGCGGCTGCTGTGGAAGGACCCCCGCAACGTGGGTTGGAAGGACAAGACATCCTA
CCGCTGGTTCCTGCAGCATCGGCCCCAAGTGGGCTACATCAGAGTGCGGTTCTACGAGGGTCCT
GAGCTGGTGGCCGACAGCAACGTGGTCCTGGACACAACCATGCGGGGTGGCCGCCTGGGGGTCT
TTTGCTTCTCCCAAGAGAACATCATCTGGGCCAATCTGCGCTACCGGTGCAATGACACCATACC
AGAGGACTACGAGACTCAGAGGCTTCTGCAGGCCTAGGGATGGGGGTGGGGACCCATTGCTGGA
AGATGGCACCATCGTGGCTACCCTCACTGCAACAAACAGGGAGCTTGGCACCCGGCTCCAAGAG
GTAGCTGCCCTAGAGGGGCTCAGAAAGGACAAAATAAAGTGTGTGTGGTGGA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038284037	(Get FASTA)	NCBI Sequence Viewer
	XP_038359695	(Get FASTA)	NCBI Sequence Viewer
	XP_038422720	(Get FASTA)	NCBI Sequence Viewer
	XP_038486861	(Get FASTA)	NCBI Sequence Viewer
	XP_533869	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021570.4
	ENSCAFP00000049903.1
	ENSCAFP00030024650.1
	ENSCAFP00030024765.1
	ENSCAFP00030024929.1
	ENSCAFP00040036613.1
	ENSCAFP00040036677.1
	ENSCAFP00040036752.1
	ENSCAFP00845027630
	ENSCAFP00845027630.1
	ENSCAFP00845027747.1

RefSeq Acc Id:

XP_533869 ⟸ XM_533869

- UniProtKB:

A0A8C0TLZ8 (UniProtKB/TrEMBL), A0A8I3P787 (UniProtKB/TrEMBL), A0A8C0NSG9 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MVPAAACVLLLTLAALGVSGQGQIPLGADLGPQMLRELQETNAALQDVRELLRQQVKEITFLKN
TVMECDACGMQPARTPGLSVRPLSQCAPGFCYPGVVCTQTASGARCGPCPAGFTGNGSHCVDVN
ECNAHPCFPRVRCINTKPGFRCEACPPGYSGPAHEGVGLAFAKANKQVCTDINECETGQHNCVP
NSVCVNTRGSFQCGPCQPGFVGDQASGCQRRSQRFCPDGTPSPCHEKADCILERDGSRSCVCAV
GWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGV
LNEQDNCKLVRNPDQRNADGDKWGDACDNCRSQKNDDQKDTDQDGKGDACDDDIDGDRIRNTVD
NCPRVPNSDQKDSDGDGVGDACDNCPQKSNADQRDVDHDFVGDACDSDQDQDGDGHQDSRDNCP
TVPNSAQQDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPNQEDVDRDGVGDACQGDFDADKV
VDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAF
NGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVK
SSTGPGEQLRNALWHTGDTASQVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPEL
VADSNVVLDTTMRGGRLGVFCFSQENIIWANLRYRCNDTIPEDYETQRLLQA

hide sequence

Ensembl Acc Id:

ENSCAFP00000049903 ⟸ ENSCAFT00000077038

Ensembl Acc Id:

ENSCAFP00000021570 ⟸ ENSCAFT00000023228

Ensembl Acc Id:

ENSCAFP00000055935 ⟸ ENSCAFT00000082068

RefSeq Acc Id:

XP_038359695 ⟸ XM_038503767

RefSeq Acc Id:

XP_038486861 ⟸ XM_038630933

RefSeq Acc Id:	XP_038284037 ⟸ XM_038428109
- UniProtKB:	A0A8C0TLZ8 (UniProtKB/TrEMBL), A0A8I3P787 (UniProtKB/TrEMBL), A0A8C0NSG9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038422720 ⟸ XM_038566792
- UniProtKB:	A0A8C0NSG9 (UniProtKB/TrEMBL), A0A8C0TLZ8 (UniProtKB/TrEMBL), A0A8I3P787 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845027747 ⟸ ENSCAFT00845035455

Ensembl Acc Id:

ENSCAFP00845027630 ⟸ ENSCAFT00845035299

Protein Domains

EGF-like TSP C-terminal

Promoters

RGD ID:

13686933

Promoter ID:

EPDNEW_C5001

Type:

single initiation site

Name:

COMP_1

Description:

cartilage oligomeric matrix protein

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	44,306,772 - 44,306,832	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014616	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030015319	UniProtKB/TrEMBL
	ENSCAFG00040022608	UniProtKB/TrEMBL
	ENSCAFG00845020025	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000023228.5	UniProtKB/TrEMBL
	ENSCAFT00000077038.2	UniProtKB/TrEMBL
	ENSCAFT00030028255.1	UniProtKB/TrEMBL
	ENSCAFT00030028390.1	UniProtKB/TrEMBL
	ENSCAFT00030028585.1	UniProtKB/TrEMBL
	ENSCAFT00040041980.1	UniProtKB/TrEMBL
	ENSCAFT00040042056.1	UniProtKB/TrEMBL
	ENSCAFT00040042132.1	UniProtKB/TrEMBL
	ENSCAFT00845035299	ENTREZGENE
	ENSCAFT00845035299.1	UniProtKB/TrEMBL
	ENSCAFT00845035455.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.10	UniProtKB/TrEMBL
	2.60.120.200	UniProtKB/TrEMBL
	4.10.1080.10	UniProtKB/TrEMBL
	Laminin	UniProtKB/TrEMBL
InterPro	ConA-like_dom_sf	UniProtKB/TrEMBL
	EGF-like_Ca-bd_dom	UniProtKB/TrEMBL
	EGF-like_dom	UniProtKB/TrEMBL
	EGF_Ca-bd_CS	UniProtKB/TrEMBL
	NOTCH1_EGF-like	UniProtKB/TrEMBL
	Thbs/COMP_coiled-coil	UniProtKB/TrEMBL
	Thrombospondin_3-like_rpt	UniProtKB/TrEMBL
	Thrombospondin_3_rpt	UniProtKB/TrEMBL
	Thrombospondin_C	UniProtKB/TrEMBL
	TSP-5_cc	UniProtKB/TrEMBL
	TSP/COMP_coiled-coil_sf	UniProtKB/TrEMBL
	TSP_type-3_rpt	UniProtKB/TrEMBL
KEGG Report	cfa:476665	UniProtKB/TrEMBL
NCBI Gene	COMP	ENTREZGENE
PANTHER	PTHR10199:SF88	UniProtKB/TrEMBL
	THROMBOSPONDIN	UniProtKB/TrEMBL
Pfam	COMP	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	TSP_3	UniProtKB/TrEMBL
	TSP_C	UniProtKB/TrEMBL
PROSITE	EGF_2	UniProtKB/TrEMBL
	EGF_3	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
	TSP3	UniProtKB/TrEMBL
	TSP_CTER	UniProtKB/TrEMBL
SMART	EGF	UniProtKB/TrEMBL
	EGF_CA	UniProtKB/TrEMBL
Superfamily-SCOP	Assembly domain of cartilage oligomeric matrix protein	UniProtKB/TrEMBL
	EGF/Laminin	UniProtKB/TrEMBL
	SSF103647	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
UniProt	A0A8C0NDA9_CANLF	UniProtKB/TrEMBL
	A0A8C0NHI9_CANLF	UniProtKB/TrEMBL
	A0A8C0NSG9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TII3_CANLF	UniProtKB/TrEMBL
	A0A8C0TKD4_CANLF	UniProtKB/TrEMBL
	A0A8C0TLZ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P787	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S498_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:39500	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM