EDRF1 (erythroid differentiation regulatory factor 1) - Rat Genome Database

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Gene: EDRF1 (erythroid differentiation regulatory factor 1) Canis lupus familiaris
Analyze
Symbol: EDRF1
Name: erythroid differentiation regulatory factor 1
RGD ID: 12332858
Description: INVOLVED IN positive regulation of DNA-templated transcription (inferred); ASSOCIATED WITH genetic disease (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: erythroid differentiation-related factor 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12834,891,140 - 34,935,228 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2834,891,252 - 34,934,826 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2834,950,372 - 34,993,887 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02835,449,421 - 35,492,964 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2835,449,429 - 35,492,960 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12835,003,219 - 35,046,953 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02834,994,947 - 35,038,504 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02835,254,722 - 35,298,244 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
EDRF1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12834,891,140 - 34,935,228 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2834,891,252 - 34,934,826 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2834,950,372 - 34,993,887 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02835,449,421 - 35,492,964 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2835,449,429 - 35,492,960 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12835,003,219 - 35,046,953 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02834,994,947 - 35,038,504 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02835,254,722 - 35,298,244 (+)NCBIUU_Cfam_GSD_1.0
EDRF1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810125,719,709 - 125,764,139 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10125,719,515 - 125,764,143 (+)EnsemblGRCh38hg38GRCh38
GRCh3710127,408,278 - 127,452,708 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610127,398,074 - 127,442,702 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410127,398,073 - 127,442,702NCBI
Celera10121,183,516 - 121,228,144 (+)NCBICelera
Cytogenetic Map10q26.2NCBI
HuRef10121,097,461 - 121,142,087 (+)NCBIHuRef
CHM1_110127,689,817 - 127,734,444 (+)NCBICHM1_1
T2T-CHM13v2.010126,602,160 - 126,646,589 (+)NCBIT2T-CHM13v2.0
Edrf1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm397133,239,422 - 133,274,710 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl7133,239,272 - 133,274,700 (+)EnsemblGRCm39 Ensembl
GRCm387133,637,544 - 133,673,017 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl7133,637,543 - 133,672,971 (+)EnsemblGRCm38mm10GRCm38
MGSCv377140,829,358 - 140,864,700 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv367133,476,049 - 133,511,314 (+)NCBIMGSCv36mm8
Celera7133,442,592 - 133,477,941 (+)NCBICelera
Cytogenetic Map7F3NCBI
cM Map777.18NCBI
Edrf1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81197,869,873 - 197,908,693 (+)NCBIGRCr8
mRatBN7.21188,441,514 - 188,478,743 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1188,441,634 - 188,478,701 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1196,791,528 - 196,828,478 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01203,968,140 - 204,005,090 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01196,641,660 - 196,678,610 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01205,706,023 - 205,743,676 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1205,706,468 - 205,743,653 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01212,654,990 - 212,692,743 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41193,134,878 - 193,171,942 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11193,284,871 - 193,320,368 (+)NCBI
Celera1186,179,317 - 186,216,380 (+)NCBICelera
Cytogenetic Map1q41NCBI
Edrf1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554773,604,187 - 3,650,243 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554773,604,186 - 3,648,061 (+)NCBIChiLan1.0ChiLan1.0
EDRF1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28137,569,250 - 137,614,554 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110137,574,601 - 137,619,905 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010122,280,506 - 122,325,148 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110126,544,523 - 126,589,285 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10126,544,523 - 126,589,285 (+)Ensemblpanpan1.1panPan2
Edrf1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721311,782,250 - 11,826,669 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648613,735,395 - 13,778,381 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648613,733,951 - 13,779,048 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EDRF1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14135,042,092 - 135,085,551 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114135,042,082 - 135,085,552 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214146,650,302 - 146,714,967 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EDRF1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.19118,342,879 - 118,387,140 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl9118,343,127 - 118,388,533 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604879,700,981 - 79,744,879 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Edrf1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473721,405,197 - 21,444,909 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473721,405,197 - 21,444,946 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in EDRF1
666 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 13 3 6 8 8 10
Low 5 5 9 6 3 6 6 4 6
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003640001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003640002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005637835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022411601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038440886 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515481 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038515484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038579074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643304 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038643308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000299 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000028 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000020349   ⟹   ENSCAFP00000018881
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2834,891,252 - 34,934,658 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000047735   ⟹   ENSCAFP00000040225
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2834,891,252 - 34,934,658 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000067292   ⟹   ENSCAFP00000047909
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2834,891,252 - 34,934,826 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845046548   ⟹   ENSCAFP00845036542
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2835,449,429 - 35,492,960 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845046718   ⟹   ENSCAFP00845036659
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2835,449,429 - 35,492,960 (+)Ensembl
RefSeq Acc Id: XM_003640001   ⟹   XP_003640049
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,891,141 - 34,935,228 (+)NCBI
Dog10K_Boxer_Tasha2834,950,374 - 34,993,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003640002   ⟹   XP_003640050
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,891,141 - 34,935,228 (+)NCBI
Dog10K_Boxer_Tasha2834,950,374 - 34,993,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005637835   ⟹   XP_005637892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,891,140 - 34,935,228 (+)NCBI
Dog10K_Boxer_Tasha2834,950,373 - 34,993,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022411600   ⟹   XP_022267308
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,891,140 - 34,935,228 (+)NCBI
Dog10K_Boxer_Tasha2834,950,372 - 34,993,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_022411601   ⟹   XP_022267309
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,893,827 - 34,935,228 (+)NCBI
Dog10K_Boxer_Tasha2834,952,492 - 34,993,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038440882   ⟹   XP_038296810
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02835,449,423 - 35,492,964 (+)NCBI
RefSeq Acc Id: XM_038440883   ⟹   XP_038296811
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02835,449,422 - 35,492,964 (+)NCBI
RefSeq Acc Id: XM_038440884   ⟹   XP_038296812
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02835,449,423 - 35,492,964 (+)NCBI
RefSeq Acc Id: XM_038440885   ⟹   XP_038296813
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02835,449,421 - 35,492,964 (+)NCBI
RefSeq Acc Id: XM_038440886   ⟹   XP_038296814
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02835,451,542 - 35,492,964 (+)NCBI
RefSeq Acc Id: XM_038515479   ⟹   XP_038371407
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12835,003,221 - 35,046,953 (+)NCBI
RefSeq Acc Id: XM_038515480   ⟹   XP_038371408
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12835,003,220 - 35,046,953 (+)NCBI
RefSeq Acc Id: XM_038515481   ⟹   XP_038371409
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12835,003,221 - 35,046,953 (+)NCBI
RefSeq Acc Id: XM_038515483   ⟹   XP_038371411
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12835,003,219 - 35,046,953 (+)NCBI
RefSeq Acc Id: XM_038515484   ⟹   XP_038371412
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12835,005,338 - 35,046,953 (+)NCBI
RefSeq Acc Id: XM_038579070   ⟹   XP_038434998
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02835,254,724 - 35,298,244 (+)NCBI
RefSeq Acc Id: XM_038579071   ⟹   XP_038434999
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02835,254,723 - 35,298,244 (+)NCBI
RefSeq Acc Id: XM_038579072   ⟹   XP_038435000
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02835,254,724 - 35,298,244 (+)NCBI
RefSeq Acc Id: XM_038579073   ⟹   XP_038435001
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02835,254,722 - 35,298,244 (+)NCBI
RefSeq Acc Id: XM_038579074   ⟹   XP_038435002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02835,256,834 - 35,298,244 (+)NCBI
RefSeq Acc Id: XM_038643304   ⟹   XP_038499232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02834,994,949 - 35,038,504 (+)NCBI
RefSeq Acc Id: XM_038643305   ⟹   XP_038499233
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02834,994,948 - 35,038,504 (+)NCBI
RefSeq Acc Id: XM_038643306   ⟹   XP_038499234
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02834,994,949 - 35,038,504 (+)NCBI
RefSeq Acc Id: XM_038643307   ⟹   XP_038499235
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02834,994,947 - 35,038,504 (+)NCBI
RefSeq Acc Id: XM_038643308   ⟹   XP_038499236
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02834,997,058 - 35,038,504 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003640049 (Get FASTA)   NCBI Sequence Viewer  
  XP_003640050 (Get FASTA)   NCBI Sequence Viewer  
  XP_005637892 (Get FASTA)   NCBI Sequence Viewer  
  XP_022267308 (Get FASTA)   NCBI Sequence Viewer  
  XP_022267309 (Get FASTA)   NCBI Sequence Viewer  
  XP_038296810 (Get FASTA)   NCBI Sequence Viewer  
  XP_038296811 (Get FASTA)   NCBI Sequence Viewer  
  XP_038296812 (Get FASTA)   NCBI Sequence Viewer  
  XP_038296813 (Get FASTA)   NCBI Sequence Viewer  
  XP_038296814 (Get FASTA)   NCBI Sequence Viewer  
  XP_038371407 (Get FASTA)   NCBI Sequence Viewer  
  XP_038371408 (Get FASTA)   NCBI Sequence Viewer  
  XP_038371409 (Get FASTA)   NCBI Sequence Viewer  
  XP_038371411 (Get FASTA)   NCBI Sequence Viewer  
  XP_038371412 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434998 (Get FASTA)   NCBI Sequence Viewer  
  XP_038434999 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435000 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435001 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435002 (Get FASTA)   NCBI Sequence Viewer  
  XP_038499232 (Get FASTA)   NCBI Sequence Viewer  
  XP_038499233 (Get FASTA)   NCBI Sequence Viewer  
  XP_038499234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038499235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038499236 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000018881.5
  ENSCAFP00000040225.1
  ENSCAFP00000047909.2
  ENSCAFP00040034507.1
  ENSCAFP00040034617.1
  ENSCAFP00040034774.1
  ENSCAFP00845036542
  ENSCAFP00845036542.1
  ENSCAFP00845036659
  ENSCAFP00845036659.1
Reference Protein Sequences
RefSeq Acc Id: XP_003640049   ⟸   XM_003640001
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TBE1 (UniProtKB/TrEMBL),   A0A8I3PZQ0 (UniProtKB/TrEMBL),   A0A8C0KUS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005637892   ⟸   XM_005637835
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003640050   ⟸   XM_003640002
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TBS9 (UniProtKB/TrEMBL),   A0A8I3QA38 (UniProtKB/TrEMBL),   A0A8C0KTC2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022267308   ⟸   XM_022411600
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022267309   ⟸   XM_022411601
- Peptide Label: isoform X5
- UniProtKB: A0A8P0NEQ8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000018881   ⟸   ENSCAFT00000020349
RefSeq Acc Id: ENSCAFP00000040225   ⟸   ENSCAFT00000047735
RefSeq Acc Id: ENSCAFP00000047909   ⟸   ENSCAFT00000067292
RefSeq Acc Id: XP_038371411   ⟸   XM_038515483
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038371408   ⟸   XM_038515480
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038371407   ⟸   XM_038515479
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038371409   ⟸   XM_038515481
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038371412   ⟸   XM_038515484
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038499235   ⟸   XM_038643307
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038499233   ⟸   XM_038643305
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038499232   ⟸   XM_038643304
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038499234   ⟸   XM_038643306
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038499236   ⟸   XM_038643308
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038296813   ⟸   XM_038440885
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038296811   ⟸   XM_038440883
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038296810   ⟸   XM_038440882
- Peptide Label: isoform X1
- UniProtKB: A0A8C0TBE1 (UniProtKB/TrEMBL),   A0A8I3PZQ0 (UniProtKB/TrEMBL),   A0A8C0KUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038296812   ⟸   XM_038440884
- Peptide Label: isoform X3
- UniProtKB: A0A8C0TBS9 (UniProtKB/TrEMBL),   A0A8I3QA38 (UniProtKB/TrEMBL),   A0A8C0KTC2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038296814   ⟸   XM_038440886
- Peptide Label: isoform X5
- UniProtKB: A0A8P0NEQ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435001   ⟸   XM_038579073
- Peptide Label: isoform X4
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434999   ⟸   XM_038579071
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038434998   ⟸   XM_038579070
- Peptide Label: isoform X1
- UniProtKB: A0A8C0KUS8 (UniProtKB/TrEMBL),   A0A8C0TBE1 (UniProtKB/TrEMBL),   A0A8I3PZQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435000   ⟸   XM_038579072
- Peptide Label: isoform X3
- UniProtKB: A0A8C0KTC2 (UniProtKB/TrEMBL),   A0A8C0TBS9 (UniProtKB/TrEMBL),   A0A8I3QA38 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435002   ⟸   XM_038579074
- Peptide Label: isoform X5
- UniProtKB: A0A8P0NEQ8 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845036542   ⟸   ENSCAFT00845046548
RefSeq Acc Id: ENSCAFP00845036659   ⟸   ENSCAFT00845046718

Promoters
RGD ID:13688372
Promoter ID:EPDNEW_C6440
Type:multiple initiation site
Name:EDRF1_1
Description:erythroid differentiation regulatory factor 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12834,891,144 - 34,891,204EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012820 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040020978 UniProtKB/TrEMBL
  ENSCAFG00845026396 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000020349.5 UniProtKB/TrEMBL
  ENSCAFT00000047735.4 UniProtKB/TrEMBL
  ENSCAFT00000067292.2 UniProtKB/TrEMBL
  ENSCAFT00040039548.1 UniProtKB/TrEMBL
  ENSCAFT00040039670.1 UniProtKB/TrEMBL
  ENSCAFT00040039848.1 UniProtKB/TrEMBL
  ENSCAFT00845046548 ENTREZGENE
  ENSCAFT00845046548.1 UniProtKB/TrEMBL
  ENSCAFT00845046718 ENTREZGENE
  ENSCAFT00845046718.1 UniProtKB/TrEMBL
KEGG Report cfa:100856332 UniProtKB/TrEMBL
NCBI Gene EDRF1 ENTREZGENE
PANTHER ERYTHROID DIFFERENTIATION-RELATED FACTOR 1 UniProtKB/TrEMBL
  ERYTHROID DIFFERENTIATION-RELATED FACTOR 1 UniProtKB/TrEMBL
UniProt A0A8C0KTC2 ENTREZGENE
  A0A8C0KUS8 ENTREZGENE
  A0A8C0TBE1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TBS9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0TEQ7_CANLF UniProtKB/TrEMBL
  A0A8I3PZQ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3QA38 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NEQ8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:40204 ENTREZGENE