PKIG (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 24 | 31,983,131 - 32,083,307 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 24 | 32,050,242 - 32,082,919 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 24 | 31,624,520 - 31,724,671 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 24 | 32,689,751 - 32,790,237 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 24 | 32,696,491 - 32,790,234 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 24 | 31,952,297 - 32,051,932 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 24 | 32,066,281 - 32,166,638 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 24 | 32,607,496 - 32,707,896 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
|
PKIG (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 20 | 44,531,875 - 44,619,037 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 20 | 44,531,785 - 44,624,247 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 20 | 43,160,516 - 43,247,678 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 20 | 42,593,850 - 42,681,092 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 20 | 42,593,849 - 42,681,091 | NCBI | | | | | Celera | 20 | 39,869,083 - 39,956,320 (+) | NCBI | | Celera | | | Cytogenetic Map | 20 | q13.12 | NCBI | | | | | HuRef | 20 | 39,901,964 - 39,989,219 (+) | NCBI | | HuRef | | | CHM1_1 | 20 | 43,063,548 - 43,150,794 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 20 | 46,267,641 - 46,354,809 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pkig (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCm39 | 2 | 163,500,306 - 163,568,078 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 2 | 163,500,306 - 163,568,078 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 2 | 163,658,211 - 163,726,158 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 2 | 163,658,386 - 163,726,158 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 2 | 163,484,122 - 163,551,894 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 2 | 163,349,892 - 163,417,599 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 2 | 169,601,971 - 169,669,883 (+) | NCBI | | Celera | | | Cytogenetic Map | 2 | H3 | NCBI | | | | | cM Map | 2 | 84.4 | NCBI | | | | |
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Pkig (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 3 | 172,749,871 - 172,817,514 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 3 | 152,330,477 - 152,398,085 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 3 | 152,366,041 - 152,398,082 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 3 | 156,137,960 - 156,205,545 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 3 | 164,636,891 - 164,704,478 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 3 | 162,380,926 - 162,448,601 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 3 | 160,047,257 - 160,115,180 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 3 | 160,047,296 - 160,115,177 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 3 | 166,238,121 - 166,305,341 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 3 | 154,568,485 - 154,635,867 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 3 | 154,474,520 - 154,541,903 (+) | NCBI | | | | | Celera | 3 | 150,983,346 - 151,050,377 (+) | NCBI | | Celera | | | Cytogenetic Map | 3 | q42 | NCBI | | | | |
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Pkig (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955445 | 12,717,962 - 12,818,734 (-) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955445 | 12,717,962 - 12,818,734 (-) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
|
PKIG (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 21 | 50,264,249 - 50,352,262 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 20 | 50,257,358 - 50,345,365 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 20 | 40,861,694 - 40,949,756 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 20 | 41,955,938 - 42,044,131 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 20 | 42,039,676 - 42,049,064 (+) | Ensembl | panpan1.1 | | panPan2 | |
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Pkig (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024408640 | 180,979,965 - 181,081,729 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936530 | 2,224,496 - 2,262,653 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936530 | 2,224,492 - 2,326,287 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
|
PKIG (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 17 | 47,008,035 - 47,044,049 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 17 | 46,933,418 - 47,044,044 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 17 | 52,419,567 - 52,501,664 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
|
PKIG (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 2 | 19,200,718 - 19,289,649 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 2 | 19,201,221 - 19,237,497 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666050 | 67,869,101 - 67,958,344 (-) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pkig (Heterocephalus glaber - naked mole-rat) |
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