NUDT18 (nudix hydrolase 18) - Rat Genome Database

Name: NUDT18
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Gene: NUDT18 (nudix hydrolase 18) Canis lupus familiaris

Analyze

Symbol:

NUDT18

Name:

nudix hydrolase 18

RGD ID:

12330401

Description:

ENCODES a protein that exhibits 8-hydroxy-dADP phosphatase activity (inferred); 8-oxo-dGDP phosphatase activity (inferred); 8-oxo-GDP phosphatase activity (inferred); INVOLVED IN dADP catabolic process (inferred); dGDP catabolic process (inferred); GDP catabolic process (inferred); ASSOCIATED WITH Conotruncal Cardiac Defects (ortholog); genetic disease (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

8-oxo-dGDP phosphatase NUDT18

RGD Orthologs

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	NUDT18 (nudix hydrolase 18)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI, OMA, Panther
Mus musculus (house mouse):	Nudt18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Nudt18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Nudt18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	NUDT18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Nudt18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	NUDT18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	NUDT18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Nudt18 (nudix hydrolase 18)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	35,139,580 - 35,144,066 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	35,140,969 - 35,143,063 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	35,729,138 - 35,733,637 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	35,351,117 - 35,355,601 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	35,352,416 - 35,355,503 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	35,296,344 - 35,300,845 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	35,150,896 - 35,155,376 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	35,306,384 - 35,310,868 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Conotruncal Cardiac Defects (ISO)

genetic disease (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

dADP catabolic process (IEA)

dGDP catabolic process (IEA)

GDP catabolic process (IEA)

Molecular Function

8-hydroxy-dADP phosphatase activity (IEA)

8-oxo-dGDP phosphatase activity (IEA)

8-oxo-GDP phosphatase activity (IEA)

hydrolase activity (IEA)

magnesium ion binding (IEA)

metal ion binding (IEA)

nucleoside diphosphate phosphatase activity (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

NUDT18
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	25	35,139,580 - 35,144,066 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	25	35,140,969 - 35,143,063 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	25	35,729,138 - 35,733,637 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	25	35,351,117 - 35,355,601 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	25	35,352,416 - 35,355,503 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	25	35,296,344 - 35,300,845 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	25	35,150,896 - 35,155,376 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	25	35,306,384 - 35,310,868 (+)	NCBI		UU_Cfam_GSD_1.0

NUDT18
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	8	22,106,878 - 22,110,482 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	8	22,106,874 - 22,109,419 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	8	21,964,389 - 21,966,932 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	8	22,020,328 - 22,022,877 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	8	20,926,679 - 20,929,248 (-)	NCBI		Celera
Cytogenetic Map	8	p21.3	NCBI
HuRef	8	20,506,929 - 20,509,498 (-)	NCBI		HuRef
CHM1_1	8	22,166,045 - 22,168,614 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	8	22,380,831 - 22,383,394 (-)	NCBI		T2T-CHM13v2.0

Nudt18
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	70,815,264 - 70,820,128 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	70,815,077 - 70,820,128 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	70,577,824 - 70,582,688 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	70,577,637 - 70,582,688 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	70,977,654 - 70,982,378 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	69,312,927 - 69,317,651 (+)	NCBI		MGSCv36	mm8
Celera	14	68,119,373 - 68,124,096 (+)	NCBI		Celera
Cytogenetic Map	14	D2	NCBI
cM Map	14	36.32	NCBI

Nudt18
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	15	52,060,297 - 52,062,822 (+)	NCBI		GRCr8
mRatBN7.2	15	45,650,597 - 45,653,985 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	15	45,650,664 - 45,653,963 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	15	49,768,454 - 49,770,976 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	15	50,879,960 - 50,882,483 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	15	47,739,269 - 47,741,794 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	15	52,265,557 - 52,268,081 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	15	52,265,557 - 52,268,079 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	15	55,989,074 - 55,991,598 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	15	50,977,124 - 50,979,648 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	15	50,992,839 - 50,996,120 (+)	NCBI
Celera	15	45,328,967 - 45,331,491 (+)	NCBI		Celera
Cytogenetic Map	15	p11	NCBI

Nudt18
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955403	45,598,813 - 45,601,940 (-)	NCBI	ChiLan1.0	ChiLan1.0

NUDT18
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	7	40,608,722 - 40,611,992 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	8	16,333,178 - 16,341,718 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	8	21,351,840 - 21,356,915 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	8	18,293,555 - 18,299,540 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	8	18,293,555 - 18,297,078 (-)	Ensembl	panpan1.1		panPan2

Nudt18
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404943	12,638,163 - 12,641,252 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936555	5,928,601 - 5,932,400 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936555	5,929,262 - 5,932,334 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NUDT18
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	6,377,815 - 6,381,596 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	6,378,987 - 6,381,712 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	6,814,635 - 6,817,363 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

NUDT18
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	8	20,176,500 - 20,184,637 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
Vero_WHO_p1.0	NW_023666052	22,057,257 - 22,060,315 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nudt18
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624758	17,691,803 - 17,694,945 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624758	17,691,790 - 17,695,027 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in NUDT18
44 total Variants

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	reproductive system	respiratory system	adipose tissue
High
Medium	2		16		5		6		12	8	10	6
Low	3	5	6	6	1	6		6
Below cutoff

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005635727	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022409795	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038435502	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038435503	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038435505	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038510445	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038510446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038510447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573893	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573894	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038573895	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038638211	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038638212	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038638213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_846345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000272	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000064	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000302	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000025	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000015361 ⟹ ENSCAFP00000014215

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	25	35,140,969 - 35,143,063 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845047519 ⟹ ENSCAFP00845037286

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	25	35,352,416 - 35,355,503 (+)	Ensembl

RefSeq Acc Id:

ENSCAFT00845047545 ⟹ ENSCAFP00845037307

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	25	35,352,416 - 35,353,788 (+)	Ensembl

RefSeq Acc Id:

XM_005635727 ⟹ XP_005635784

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	35,140,851 - 35,144,066 (+)	NCBI
Dog10K_Boxer_Tasha	25	35,730,438 - 35,733,637 (+)	NCBI

Sequence:

show sequence

CGCGAGCGCCGGGCCCGGGTCGGCAGGGGGAGGGGGCGAGGGCGCCCGACCGCAGCCTCGCCGG
CGTCCCGGCCTGCTCACTGCGGCCGCTCTCCGTCCTCCGGCCCCGGGGGACCCGATGGCCTCGG
AGGGCCTGGCGAGGGTGCTGGCGGCGCTGCTGGGGGGCCAGGGGGTGAGCGTGCACGGCTATGA
TTCGGAGCCGGCCGGGGAGCCCCCGGCGCCGGTGCGGCTGCGGAAGAACGTCTGCTACGTGGTG
CTGGCCGTGTTCCTCAACGAGCAGGAGGCCAAGAAAGAGTGCCGTGGATCATGGTACCTACCCG
CGGGGAGAATGGAGCCTGGGGAGACCATCGTGGAGGCCCTGCAGCGGGAGGTGAAGGAGGAGGC
CGGGCTGTACTGTGAGCCCCTGACATTGCTTTCTGTGGAGGAGCGGGGCCCATCCTGGATCCGC
TTTGTGTTCCTCGCTCAAGCCACAGGTGGAATTCTCAAGACTTCCAAGGAGGCAGATGCAGAGT
CCCTGCAGGCTGGCTGGTACCCACGAAGCTCCCTGCCCACCCCGCTGCGAGCCCAGGACATTCT
GCACCTGGTAGAGCTAGCTGCCCGGTACCGCCAGCAAGCCAGGCACCCTCTTCTTCTGCCCCAG
GAGCTTCCCTGCAGTCTGGTCTGCCAGCGACTCGTGGCCACTTTTACCAGTGTCCAGACAGTGT
GGGTGCTGGTGGGCGCAGAGGGGATGCCTCACTTGCCCATCACTGCCTGCGGCTTCAGTCCCAT
GGAGCAAAGGGGTGGCATCAAGATGGCCATCCTGCGGCTGCTACAGGAATGTCTGACCCTGCAC
CATTTGGCAGTGGAGACCAAGGGGTTGCTTGGACTGCAGCACCTGGGCAAGGACCACGCAGATG
GCATCTGCTTGAATGTGCTGGTGACTGTGGCTTTTCGGAACCCAGGCATGCAGAGTGAGCCCCC
AAAAGTTCGGGGTGAGAACTTTTTTTGGTGGAAGGTGATGGAGGAAGACCTACAAAGCCAGCTC
TTACAGAGGCTTCAGGAATCATCGGTCGTCCCAGTCAACAGATAGGAAGGTGCCATCGTGGTGC
AAGGAGCCGGGCACCTGTGCCCCACCCCCTACCGTGGCTCTGCCTTCCTAAGGGAGGCAGGAGG
TTGGCAGTCAGAAGTCTTGTTGCATTGGGAGCAGGTGATTCTCTTAGTTCTCAGGGTAATTTCC
TTTTCTGTGGAACAGGTCCCTACGCTGCACCAAAAGGACAGTGACTTTAACCAAACAAGGAGTT
CAGAGCTCAAGGATCTAATTACTCTGTGGGCATGATGAGGGCACTACTCCCTAAGGGGAGGAGA
GAACTTTCTGAACCTGAGATGGCATCTACTTATCATTTTCCATGCTCCCCTCAGTAAAGGCCTA
CATCCGGGTTCCAGGTTCTTAGGCACTTAGAACACAGACTGGGTGCGGGGTGGGGGTGGGAATG
GGGGGGGTCATTCCAAGGGAGTGGGCCCCTTGCTGAGTAAATAGGTGGTACTTGCTTTGCCTTC
CTTCCTAAATGTGTCTGTGGGGAGGAAGTGAGCAGGAAGCAGGGGACTGCATCAAGAAGGAAGC
TCCTCCCTTGACCCACCACACCCTCCCAGCTCTTCCCAGACAGCAAGTGACCTGGGTGGGCAGG
CTTCCTGCCATCCACCATAGCCTCTGTGGCCCACTGGGGCTCTCCTTCTCTTGCCTGCCTGTGT
CCTCATCCCCTCCAGGGTTTGGCAGTGAGAACACTGGGAGCTTCAGGTGGGTGAGGAGCCATAA
AGTAAAAGCCAGTCCCACCTCTTTTCCCCTGCTCCCTCCCTGCATCACTCTGCGGGCCACAAGC
TTCTTGCCCCTGCCTTTCTACAACTCCAGCCGGAGCCAGACCGAAACCCTTTATTCATTTCTCC
TGAGCCCAGCAGAATCATGATAAAAAGTATTATTATTAAAAAAAAAAAACTTTACTAAAACTTC
AGGGAAAAATCATAGGAAGTAAACAAAGAAGATTTATCATGTGCTACTCACTGCATGTAATACA
GATTTCTGGTTCTGAGCAAGAGAA

hide sequence

RefSeq Acc Id:

XM_022409795 ⟹ XP_022265503

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	35,139,580 - 35,144,066 (+)	NCBI
Dog10K_Boxer_Tasha	25	35,729,138 - 35,733,637 (+)	NCBI

Sequence:

show sequence

CCCAGGACGGTTCACCTCCCTGACAACCCTGTGGAAGAAGGGCTATTATGAGCCTACTCTACAG
ATGAGGAAACTAAGACCCACGACTCATCCAGGGGCACAGGGCCAGCCAGTGAGCTGCGGCTGGA
CATCTGGTTCCAAGTCCAGTACTTTATCAGCACGTTCCCAAAAGGAAGCTGGCAGGAGGGAAAG
GGGAGACCTAACTGGGGATGAGGAGCTCTGATTCGGCTGCCTTTATAGTTTCACTCCAGCTGGC
CCTGCCTTCCTGTCCTAAGAGTAGGTTAAAGGAAGCTCTGAGGAGGAAAGGTCAGTCTGGGAGA
GAAGTAGGAACTCGCCAAAACAACCCACACCCTGCTCTCAGAGCGCCAGGCCACCAGGCCTTGT
GAGCTCGGTGTGCGGGGAACAAAGCCGAAGGAGCAAGACCTGGTCCCTGCCCTCCCAGGGCTCT
CAGTCTGCAGTGGAGAGGGCCCTAAAACTGCGTGGGACATGCAGCGGGCAAGGGGCCAGGACAC
CGATGAAGGATGAGGTTCTACTGATCCAGGAGGCCAAGAAAGAGTGCCGTGGATCATGGTACCT
ACCCGCGGGGAGAATGGAGCCTGGGGAGACCATCGTGGAGGCCCTGCAGCGGGAGGTGAAGGAG
GAGGCCGGGCTGTACTGTGAGCCCCTGACATTGCTTTCTGTGGAGGAGCGGGGCCCATCCTGGA
TCCGCTTTGTGTTCCTCGCTCAAGCCACAGGTGGAATTCTCAAGACTTCCAAGGAGGCAGATGC
AGAGTCCCTGCAGGCTGGCTGGTACCCACGAAGCTCCCTGCCCACCCCGCTGCGAGCCCAGGAC
ATTCTGCACCTGGTAGAGCTAGCTGCCCGGTACCGCCAGCAAGCCAGGCACCCTCTTCTTCTGC
CCCAGGAGCTTCCCTGCAGTCTGGTCTGCCAGCGACTCGTGGCCACTTTTACCAGTGTCCAGAC
AGTGTGGGTGCTGGTGGGCGCAGAGGGGATGCCTCACTTGCCCATCACTGCCTGCGGCTTCAGT
CCCATGGAGCAAAGGGGTGGCATCAAGATGGCCATCCTGCGGCTGCTACAGGAATGTCTGACCC
TGCACCATTTGGCAGTGGAGACCAAGGGGTTGCTTGGACTGCAGCACCTGGGCAAGGACCACGC
AGATGGCATCTGCTTGAATGTGCTGGTGACTGTGGCTTTTCGGAACCCAGGCATGCAGAGTGAG
CCCCCAAAAGTTCGGGGTGAGAACTTTTTTTGGTGGAAGGTGATGGAGGAAGACCTACAAAGCC
AGCTCTTACAGAGGCTTCAGGAATCATCGGTCGTCCCAGTCAACAGATAGGAAGGTGCCATCGT
GGTGCAAGGAGCCGGGCACCTGTGCCCCACCCCCTACCGTGGCTCTGCCTTCCTAAGGGAGGCA
GGAGGTTGGCAGTCAGAAGTCTTGTTGCATTGGGAGCAGGTGATTCTCTTAGTTCTCAGGGTAA
TTTCCTTTTCTGTGGAACAGGTCCCTACGCTGCACCAAAAGGACAGTGACTTTAACCAAACAAG
GAGTTCAGAGCTCAAGGATCTAATTACTCTGTGGGCATGATGAGGGCACTACTCCCTAAGGGGA
GGAGAGAACTTTCTGAACCTGAGATGGCATCTACTTATCATTTTCCATGCTCCCCTCAGTAAAG
GCCTACATCCGGGTTCCAGGTTCTTAGGCACTTAGAACACAGACTGGGTGCGGGGTGGGGGTGG
GAATGGGGGGGGTCATTCCAAGGGAGTGGGCCCCTTGCTGAGTAAATAGGTGGTACTTGCTTTG
CCTTCCTTCCTAAATGTGTCTGTGGGGAGGAAGTGAGCAGGAAGCAGGGGACTGCATCAAGAAG
GAAGCTCCTCCCTTGACCCACCACACCCTCCCAGCTCTTCCCAGACAGCAAGTGACCTGGGTGG
GCAGGCTTCCTGCCATCCACCATAGCCTCTGTGGCCCACTGGGGCTCTCCTTCTCTTGCCTGCC
TGTGTCCTCATCCCCTCCAGGGTTTGGCAGTGAGAACACTGGGAGCTTCAGGTGGGTGAGGAGC
CATAAAGTAAAAGCCAGTCCCACCTCTTTTCCCCTGCTCCCTCCCTGCATCACTCTGCGGGCCA
CAAGCTTCTTGCCCCTGCCTTTCTACAACTCCAGCCGGAGCCAGACCGAAACCCTTTATTCATT
TCTCCTGAGCCCAGCAGAATCATGATAAAAAGTATTATTATTAAAAAAAAAAAACTTTACTAAA
ACTTCAGGGAAAAATCATAGGAAGTAAACAAAGAAGATTTATCATGTGCTACTCACTGCATGTA
ATACAGATTTCTGGTTCTGAGCAAGAGAA

hide sequence

RefSeq Acc Id:

XM_038435502 ⟹ XP_038291430

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	35,352,418 - 35,355,601 (+)	NCBI

RefSeq Acc Id:

XM_038435503 ⟹ XP_038291431

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	35,352,417 - 35,355,601 (+)	NCBI

RefSeq Acc Id:

XM_038435505 ⟹ XP_038291433

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	25	35,351,117 - 35,355,601 (+)	NCBI

RefSeq Acc Id:

XM_038510445 ⟹ XP_038366373

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	35,297,662 - 35,300,845 (+)	NCBI

RefSeq Acc Id:

XM_038510446 ⟹ XP_038366374

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	35,297,662 - 35,300,845 (+)	NCBI

RefSeq Acc Id:

XM_038510447 ⟹ XP_038366375

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	25	35,296,344 - 35,300,845 (+)	NCBI

RefSeq Acc Id:

XM_038573893 ⟹ XP_038429821

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	35,307,685 - 35,310,868 (+)	NCBI

RefSeq Acc Id:

XM_038573894 ⟹ XP_038429822

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	35,307,684 - 35,310,868 (+)	NCBI

RefSeq Acc Id:

XM_038573895 ⟹ XP_038429823

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	25	35,306,384 - 35,310,868 (+)	NCBI

RefSeq Acc Id:

XM_038638211 ⟹ XP_038494139

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	35,152,197 - 35,155,376 (+)	NCBI

RefSeq Acc Id:

XM_038638212 ⟹ XP_038494140

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	35,152,196 - 35,155,376 (+)	NCBI

RefSeq Acc Id:

XM_038638213 ⟹ XP_038494141

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	25	35,150,896 - 35,155,376 (+)	NCBI

RefSeq Acc Id:

XM_846345 ⟹ XP_851438

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	35,140,851 - 35,144,066 (+)	NCBI
Dog10K_Boxer_Tasha	25	35,730,439 - 35,733,637 (+)	NCBI

Sequence:

show sequence

CGCGAGCGCCGGGCCCGGGTCGGCAGGGGGAGGGGGCGAGGGCGCCCGACCGCAGCCTCGCCGG
CGTCCCGGCCTGCTCACTGCGGCCGCTCTCCGTCCTCCGGCCCCGGGGGACCCGATGGCCTCGG
AGGGCCTGGCGAGGGTGCTGGCGGCGCTGCTGGGGGGCCAGGGGGTGAGCGTGCACGGCTATGA
TTCGGAGCCGGCCGGGGAGCCCCCGGCGCCGGTGCGGCTGCGGAAGAACGTCTGCTACGTGGTG
CTGGCCGTGTTCCTCAACGAGCAGGATGAGGTTCTACTGATCCAGGAGGCCAAGAAAGAGTGCC
GTGGATCATGGTACCTACCCGCGGGGAGAATGGAGCCTGGGGAGACCATCGTGGAGGCCCTGCA
GCGGGAGGTGAAGGAGGAGGCCGGGCTGTACTGTGAGCCCCTGACATTGCTTTCTGTGGAGGAG
CGGGGCCCATCCTGGATCCGCTTTGTGTTCCTCGCTCAAGCCACAGGTGGAATTCTCAAGACTT
CCAAGGAGGCAGATGCAGAGTCCCTGCAGGCTGGCTGGTACCCACGAAGCTCCCTGCCCACCCC
GCTGCGAGCCCAGGACATTCTGCACCTGGTAGAGCTAGCTGCCCGGTACCGCCAGCAAGCCAGG
CACCCTCTTCTTCTGCCCCAGGAGCTTCCCTGCAGTCTGGTCTGCCAGCGACTCGTGGCCACTT
TTACCAGTGTCCAGACAGTGTGGGTGCTGGTGGGCGCAGAGGGGATGCCTCACTTGCCCATCAC
TGCCTGCGGCTTCAGTCCCATGGAGCAAAGGGGTGGCATCAAGATGGCCATCCTGCGGCTGCTA
CAGGAATGTCTGACCCTGCACCATTTGGCAGTGGAGACCAAGGGGTTGCTTGGACTGCAGCACC
TGGGCAAGGACCACGCAGATGGCATCTGCTTGAATGTGCTGGTGACTGTGGCTTTTCGGAACCC
AGGCATGCAGAGTGAGCCCCCAAAAGTTCGGGGTGAGAACTTTTTTTGGTGGAAGGTGATGGAG
GAAGACCTACAAAGCCAGCTCTTACAGAGGCTTCAGGAATCATCGGTCGTCCCAGTCAACAGAT
AGGAAGGTGCCATCGTGGTGCAAGGAGCCGGGCACCTGTGCCCCACCCCCTACCGTGGCTCTGC
CTTCCTAAGGGAGGCAGGAGGTTGGCAGTCAGAAGTCTTGTTGCATTGGGAGCAGGTGATTCTC
TTAGTTCTCAGGGTAATTTCCTTTTCTGTGGAACAGGTCCCTACGCTGCACCAAAAGGACAGTG
ACTTTAACCAAACAAGGAGTTCAGAGCTCAAGGATCTAATTACTCTGTGGGCATGATGAGGGCA
CTACTCCCTAAGGGGAGGAGAGAACTTTCTGAACCTGAGATGGCATCTACTTATCATTTTCCAT
GCTCCCCTCAGTAAAGGCCTACATCCGGGTTCCAGGTTCTTAGGCACTTAGAACACAGACTGGG
TGCGGGGTGGGGGTGGGAATGGGGGGGGTCATTCCAAGGGAGTGGGCCCCTTGCTGAGTAAATA
GGTGGTACTTGCTTTGCCTTCCTTCCTAAATGTGTCTGTGGGGAGGAAGTGAGCAGGAAGCAGG
GGACTGCATCAAGAAGGAAGCTCCTCCCTTGACCCACCACACCCTCCCAGCTCTTCCCAGACAG
CAAGTGACCTGGGTGGGCAGGCTTCCTGCCATCCACCATAGCCTCTGTGGCCCACTGGGGCTCT
CCTTCTCTTGCCTGCCTGTGTCCTCATCCCCTCCAGGGTTTGGCAGTGAGAACACTGGGAGCTT
CAGGTGGGTGAGGAGCCATAAAGTAAAAGCCAGTCCCACCTCTTTTCCCCTGCTCCCTCCCTGC
ATCACTCTGCGGGCCACAAGCTTCTTGCCCCTGCCTTTCTACAACTCCAGCCGGAGCCAGACCG
AAACCCTTTATTCATTTCTCCTGAGCCCAGCAGAATCATGATAAAAAGTATTATTATTAAAAAA
AAAAAACTTTACTAAAACTTCAGGGAAAAATCATAGGAAGTAAACAAAGAAGATTTATCATGTG
CTACTCACTGCATGTAATACAGATTTCTGGTTCTGAGCAAGAGAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_005635784	(Get FASTA)	NCBI Sequence Viewer
	XP_022265503	(Get FASTA)	NCBI Sequence Viewer
	XP_038291430	(Get FASTA)	NCBI Sequence Viewer
	XP_038291431	(Get FASTA)	NCBI Sequence Viewer
	XP_038291433	(Get FASTA)	NCBI Sequence Viewer
	XP_038366373	(Get FASTA)	NCBI Sequence Viewer
	XP_038366374	(Get FASTA)	NCBI Sequence Viewer
	XP_038366375	(Get FASTA)	NCBI Sequence Viewer
	XP_038429821	(Get FASTA)	NCBI Sequence Viewer
	XP_038429822	(Get FASTA)	NCBI Sequence Viewer
	XP_038429823	(Get FASTA)	NCBI Sequence Viewer
	XP_038494139	(Get FASTA)	NCBI Sequence Viewer
	XP_038494140	(Get FASTA)	NCBI Sequence Viewer
	XP_038494141	(Get FASTA)	NCBI Sequence Viewer
	XP_851438	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000014215.5
	ENSCAFP00000069421.1
	ENSCAFP00030041725.1
	ENSCAFP00040038158.1
	ENSCAFP00845037286
	ENSCAFP00845037286.1
	ENSCAFP00845037307.1

RefSeq Acc Id:	XP_851438 ⟸ XM_846345
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z5I0 (UniProtKB/TrEMBL), A0A8C0KZS0 (UniProtKB/TrEMBL), A0A8I3PR54 (UniProtKB/TrEMBL)
- Sequence:	show sequence MASEGLARVLAALLGGQGVSVHGYDSEPAGEPPAPVRLRKNVCYVVLAVFLNEQDEVLLIQEAK KECRGSWYLPAGRMEPGETIVEALQREVKEEAGLYCEPLTLLSVEERGPSWIRFVFLAQATGGI LKTSKEADAESLQAGWYPRSSLPTPLRAQDILHLVELAARYRQQARHPLLLPQELPCSLVCQRL VATFTSVQTVWVLVGAEGMPHLPITACGFSPMEQRGGIKMAILRLLQECLTLHHLAVETKGLLG LQHLGKDHADGICLNVLVTVAFRNPGMQSEPPKVRGENFFWWKVMEEDLQSQLLQRLQESSVVP VNR hide sequence

RefSeq Acc Id:

XP_005635784 ⟸ XM_005635727

- Peptide Label:

isoform X2

- Sequence:

show sequence

MASEGLARVLAALLGGQGVSVHGYDSEPAGEPPAPVRLRKNVCYVVLAVFLNEQEAKKECRGSW
YLPAGRMEPGETIVEALQREVKEEAGLYCEPLTLLSVEERGPSWIRFVFLAQATGGILKTSKEA
DAESLQAGWYPRSSLPTPLRAQDILHLVELAARYRQQARHPLLLPQELPCSLVCQRLVATFTSV
QTVWVLVGAEGMPHLPITACGFSPMEQRGGIKMAILRLLQECLTLHHLAVETKGLLGLQHLGKD
HADGICLNVLVTVAFRNPGMQSEPPKVRGENFFWWKVMEEDLQSQLLQRLQESSVVPVNR

hide sequence

RefSeq Acc Id:

XP_022265503 ⟸ XM_022409795

- Peptide Label:

isoform X3

- Sequence:

show sequence

MKDEVLLIQEAKKECRGSWYLPAGRMEPGETIVEALQREVKEEAGLYCEPLTLLSVEERGPSWI
RFVFLAQATGGILKTSKEADAESLQAGWYPRSSLPTPLRAQDILHLVELAARYRQQARHPLLLP
QELPCSLVCQRLVATFTSVQTVWVLVGAEGMPHLPITACGFSPMEQRGGIKMAILRLLQECLTL
HHLAVETKGLLGLQHLGKDHADGICLNVLVTVAFRNPGMQSEPPKVRGENFFWWKVMEEDLQSQ
LLQRLQESSVVPVNR

hide sequence

RefSeq Acc Id:

ENSCAFP00000014215 ⟸ ENSCAFT00000015361

RefSeq Acc Id:	XP_038366375 ⟸ XM_038510447
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038366373 ⟸ XM_038510445
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038366374 ⟸ XM_038510446
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038494141 ⟸ XM_038638213
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038494140 ⟸ XM_038638212
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038494139 ⟸ XM_038638211
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038291433 ⟸ XM_038435505
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038291431 ⟸ XM_038435503
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038291430 ⟸ XM_038435502
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0Z5I0 (UniProtKB/TrEMBL), A0A8C0KZS0 (UniProtKB/TrEMBL), A0A8I3PR54 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038429823 ⟸ XM_038573895
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038429822 ⟸ XM_038573894
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038429821 ⟸ XM_038573893
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KZS0 (UniProtKB/TrEMBL), A0A8C0Z5I0 (UniProtKB/TrEMBL), A0A8I3PR54 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845037286 ⟸ ENSCAFT00845047519

RefSeq Acc Id:

ENSCAFP00845037307 ⟸ ENSCAFT00845047545

Protein Domains

Nudix hydrolase

Promoters

RGD ID:

13687797

Promoter ID:

EPDNEW_C5866

Type:

initiation region

Name:

NUDT18_1

Description:

nudix hydrolase 18

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	25	35,140,902 - 35,140,962	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000009667	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030025843	UniProtKB/TrEMBL
	ENSCAFG00040023509	UniProtKB/TrEMBL
	ENSCAFG00845026962	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000015361.5	UniProtKB/TrEMBL
	ENSCAFT00000106356.1	UniProtKB/TrEMBL
	ENSCAFT00030047709.1	UniProtKB/TrEMBL
	ENSCAFT00040043728.1	UniProtKB/TrEMBL
	ENSCAFT00845047519	ENTREZGENE
	ENSCAFT00845047519.1	UniProtKB/TrEMBL
	ENSCAFT00845047545.1	UniProtKB/TrEMBL
Gene3D-CATH	Nucleoside Triphosphate Pyrophosphohydrolase	UniProtKB/TrEMBL
InterPro	Nudix_hydrolase	UniProtKB/TrEMBL
	NUDIX_hydrolase-like_dom_sf	UniProtKB/TrEMBL
	NUDIX_hydrolase_CS	UniProtKB/TrEMBL
	NUDIX_hydrolase_dom	UniProtKB/TrEMBL
	NUDT18_NUDIX	UniProtKB/TrEMBL
NCBI Gene	NUDT18	ENTREZGENE
PANTHER	8-OXO-DGDP PHOSPHATASE NUDT18	UniProtKB/TrEMBL
	MUTT/NUDIX HYDROLASE	UniProtKB/TrEMBL
Pfam	NUDIX	UniProtKB/TrEMBL
PRINTS	NUDIXFAMILY	UniProtKB/TrEMBL
PROSITE	NUDIX	UniProtKB/TrEMBL
	NUDIX_BOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF55811	UniProtKB/TrEMBL
UniProt	A0A8C0KZS0	ENTREZGENE
	A0A8C0Z5I0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PR54	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PUV0_CANLF	UniProtKB/TrEMBL
	A0A8P0TLH5_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:44031	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar